RNA–Protein interactions for RNA: ENST00000460509.1

VBP1-202, Transcript of VHL binding protein 1, humanhuman

TSL 2

Gene VBP1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-202ENST00000460509 ZNF157P51786 506 aaPredicted RBP7.87□□□□□ -1.15
VBP1-202ENST00000460509 MRPL58Q14197 206 aaKnown RBP7.87□□□□□ -1.15
VBP1-202ENST00000460509 GRIK5Q16478 980 aa7.87□□□□□ -1.15
VBP1-202ENST00000460509 TRAPPC3LQ5T215 181 aa7.87□□□□□ -1.15
VBP1-202ENST00000460509 TMEM151AQ8N4L1 468 aa7.87□□□□□ -1.15
VBP1-202ENST00000460509 SLC7A3Q8WY07 619 aa7.87□□□□□ -1.15
VBP1-202ENST00000460509 PPME1Q9Y570 386 aa7.87□□□□□ -1.15
VBP1-202ENST00000460509 FBXO24O75426 580 aa7.86□□□□□ -1.15
VBP1-202ENST00000460509 CTSHP09668 335 aa7.86□□□□□ -1.15
VBP1-202ENST00000460509 XRCC5P13010 732 aaKnown RBP7.86□□□□□ -1.15
VBP1-202ENST00000460509 EPHA1P21709 976 aa7.86□□□□□ -1.15
VBP1-202ENST00000460509 SNRPNP63162 240 aaKnown RBP7.86□□□□□ -1.15
VBP1-202ENST00000460509 MEI1Q5TIA1 1274 aa7.86□□□□□ -1.15
VBP1-202ENST00000460509 MSL1Q68DK7 614 aa7.86□□□□□ -1.15
VBP1-202ENST00000460509 FAM117BQ6P1L5 589 aa7.86□□□□□ -1.15
VBP1-202ENST00000460509 CRELD1Q96HD1 420 aa7.86□□□□□ -1.15
VBP1-202ENST00000460509 ADAM19Q9H013 955 aa7.86□□□□□ -1.15
VBP1-202ENST00000460509 GPN3Q9UHW5 284 aaPredicted RBP7.86□□□□□ -1.15
VBP1-202ENST00000460509 ITPKAP23677 461 aa7.85□□□□□ -1.15
VBP1-202ENST00000460509 DGKGP49619 791 aa7.85□□□□□ -1.15
VBP1-202ENST00000460509 PCDH1Q08174 1060 aa7.85□□□□□ -1.15
VBP1-202ENST00000460509 IKBKEQ14164 716 aa7.85□□□□□ -1.15
VBP1-202ENST00000460509 TPTE2Q6XPS3 522 aa7.85□□□□□ -1.15
VBP1-202ENST00000460509 CACTIN-AS1Q8N1I8 211 aa7.85□□□□□ -1.15
VBP1-202ENST00000460509 CLEC4MQ9H2X3 399 aaPredicted RBP7.85□□□□□ -1.15
VBP1-202ENST00000460509 ZNF576Q9H609 170 aa7.85□□□□□ -1.15
VBP1-202ENST00000460509 ZFYVE1Q9HBF4 777 aa7.85□□□□□ -1.15
VBP1-202ENST00000460509 SOX13Q9UN79 622 aa7.85□□□□□ -1.15
VBP1-202ENST00000460509 TAF1CQ15572 869 aaPredicted RBP7.84□□□□□ -1.15
VBP1-202ENST00000460509 VN1R5Q7Z5H4 357 aa7.84□□□□□ -1.15
VBP1-202ENST00000460509 PODNQ7Z5L7 613 aa7.84□□□□□ -1.15
VBP1-202ENST00000460509 C3orf58Q8NDZ4 430 aa7.84□□□□□ -1.15
VBP1-202ENST00000460509 H3BRJ5 948 aa7.83□□□□□ -1.16
VBP1-202ENST00000460509 RNF225M0QZC1 329 aaPredicted RBP7.83□□□□□ -1.16
VBP1-202ENST00000460509 RECKO95980 971 aa7.83□□□□□ -1.16
VBP1-202ENST00000460509 NID1P14543 1247 aa7.83□□□□□ -1.16
VBP1-202ENST00000460509 BAG6P46379 1132 aa7.83□□□□□ -1.16
VBP1-202ENST00000460509 CARD10Q9BWT7 1032 aa7.83□□□□□ -1.16
VBP1-202ENST00000460509 PRDM6Q9NQX0 595 aa7.83□□□□□ -1.16
VBP1-202ENST00000460509 MKL2Q9ULH7 1088 aa7.83□□□□□ -1.16
VBP1-202ENST00000460509 SOX1O00570 391 aaPredicted RBP7.82□□□□□ -1.16
VBP1-202ENST00000460509 HOXB4P17483 251 aaPredicted RBP7.82□□□□□ -1.16
VBP1-202ENST00000460509 VAMP1P23763 118 aa7.82□□□□□ -1.16
VBP1-202ENST00000460509 ARL4DP49703 201 aa7.82□□□□□ -1.16
VBP1-202ENST00000460509 PTPN12Q05209 780 aaKnown RBP7.82□□□□□ -1.16
VBP1-202ENST00000460509 CCDC85BQ15834 202 aaPredicted RBP7.82□□□□□ -1.16
VBP1-202ENST00000460509 ZNF423Q2M1K9 1284 aa7.82□□□□□ -1.16
VBP1-202ENST00000460509 PLVAPQ9BX97 442 aa7.82□□□□□ -1.16
VBP1-202ENST00000460509 CNTNAP5Q8WYK1 1306 aa7.81□□□□□ -1.16
VBP1-202ENST00000460509 PIK3R2O00459 728 aa7.81□□□□□ -1.16
VBP1-202ENST00000460509 GNB5O14775 395 aa7.81□□□□□ -1.16
VBP1-202ENST00000460509 ESRRAP11474 423 aaPredicted RBP7.81□□□□□ -1.16
VBP1-202ENST00000460509 GSTM4Q03013 218 aa7.81□□□□□ -1.16
VBP1-202ENST00000460509 FAAP100Q0VG06 881 aa7.81□□□□□ -1.16
VBP1-202ENST00000460509 HGSNATQ68CP4 663 aa7.81□□□□□ -1.16
VBP1-202ENST00000460509 CEP44Q9C0F1 390 aa7.81□□□□□ -1.16
VBP1-202ENST00000460509 SEC31BQ9NQW1 1179 aa7.81□□□□□ -1.16
VBP1-202ENST00000460509 PPM1HQ9ULR3 514 aa7.81□□□□□ -1.16
VBP1-202ENST00000460509 FAM229AH3BQW9 127 aa7.8□□□□□ -1.16
VBP1-202ENST00000460509 FSCN2O14926 492 aa7.8□□□□□ -1.16
VBP1-202ENST00000460509 RAC1P63000 192 aa7.8□□□□□ -1.16
VBP1-202ENST00000460509 PPP2R3AQ06190 1150 aa7.8□□□□□ -1.16
VBP1-202ENST00000460509 COL9A3Q14050 684 aaPredicted RBP7.8□□□□□ -1.16
VBP1-202ENST00000460509 MAP3K11Q16584 847 aa7.8□□□□□ -1.16
VBP1-202ENST00000460509 RPS26P11Q5JNZ5 115 aaPredicted RBP7.8□□□□□ -1.16
VBP1-202ENST00000460509 C9orf131Q5VYM1 1079 aa7.8□□□□□ -1.16
VBP1-202ENST00000460509 LINC00114Q6XXX2 140 aa7.8□□□□□ -1.16
VBP1-202ENST00000460509 BEND7Q8N7W2 519 aaPredicted RBP7.8□□□□□ -1.16
VBP1-202ENST00000460509 TRIM11Q96F44 468 aa7.8□□□□□ -1.16
VBP1-202ENST00000460509 TMEM39AQ9NV64 488 aa7.8□□□□□ -1.16
VBP1-202ENST00000460509 USP31Q70CQ4 1352 aa7.8□□□□□ -1.16
VBP1-202ENST00000460509 SPDYE3A6NKU9 549 aa7.79□□□□□ -1.16
VBP1-202ENST00000460509 SCAMP3O14828 347 aaKnown RBP7.79□□□□□ -1.16
VBP1-202ENST00000460509 ZNF76P36508 570 aa7.79□□□□□ -1.16
VBP1-202ENST00000460509 PIP4K2BP78356 416 aa7.79□□□□□ -1.16
VBP1-202ENST00000460509 C19orf57Q0VDD7 668 aa7.79□□□□□ -1.16
VBP1-202ENST00000460509 TRIM28Q13263 835 aaKnown RBP7.79□□□□□ -1.16
VBP1-202ENST00000460509 LDLRAD1Q5T700 205 aa7.79□□□□□ -1.16
VBP1-202ENST00000460509 DDX54Q8TDD1 881 aaKnown RBP7.79□□□□□ -1.16
VBP1-202ENST00000460509 F6X3S4 739 aa7.78□□□□□ -1.16
VBP1-202ENST00000460509 B3GALT4O96024 378 aa7.78□□□□□ -1.16
VBP1-202ENST00000460509 CELA3AP09093 270 aa7.78□□□□□ -1.16
VBP1-202ENST00000460509 ST13P50502 369 aaKnown RBP7.78□□□□□ -1.16
VBP1-202ENST00000460509 SETDB1Q15047 1291 aa7.78□□□□□ -1.16
VBP1-202ENST00000460509 RNF34Q969K3 372 aa7.78□□□□□ -1.16
VBP1-202ENST00000460509 KLHDC7BQ96G42 594 aa7.78□□□□□ -1.16
VBP1-202ENST00000460509 GGT7Q9UJ14 662 aa7.78□□□□□ -1.16
VBP1-202ENST00000460509 A0A0A0MRY4 1105 aa7.77□□□□□ -1.17
VBP1-202ENST00000460509 TCF3P15923 654 aa7.77□□□□□ -1.17
VBP1-202ENST00000460509 NLRP12P59046 1061 aa7.77□□□□□ -1.17
VBP1-202ENST00000460509 PRRT3Q5FWE3 981 aa7.77□□□□□ -1.17
VBP1-202ENST00000460509 SV2BQ7L1I2 683 aa7.77□□□□□ -1.17
VBP1-202ENST00000460509 SCARF2Q96GP6 870 aaPredicted RBP7.77□□□□□ -1.17
VBP1-202ENST00000460509 NECAB3Q96P71 396 aaPredicted RBP7.77□□□□□ -1.17
VBP1-202ENST00000460509 TRIM56Q9BRZ2 755 aaKnown RBP7.77□□□□□ -1.17
VBP1-202ENST00000460509 CBX8Q9HC52 389 aa7.77□□□□□ -1.17
VBP1-202ENST00000460509 ENC1O14682 589 aa7.76□□□□□ -1.17
VBP1-202ENST00000460509 DDX3YO15523 660 aaKnown RBP7.76□□□□□ -1.17
VBP1-202ENST00000460509 DEAF1O75398 565 aaPredicted RBP7.76□□□□□ -1.17
VBP1-202ENST00000460509 PAGE1O75459 146 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 139 ms