RNA–Protein interactions for RNA: ENST00000460485.1

ERCC3-205, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 3

Gene ERCC3, Length 815 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-205ENST00000460485 DDX46Q7L014 1031 aaKnown RBP16.79■□□□□ 0.28
ERCC3-205ENST00000460485 ZNF594Q96JF6 807 aaPredicted RBP16.79■□□□□ 0.28
ERCC3-205ENST00000460485 CTNNA3Q9UI47 895 aa16.79■□□□□ 0.28
ERCC3-205ENST00000460485 SMC3Q9UQE7 1217 aa16.79■□□□□ 0.28
ERCC3-205ENST00000460485 ADRA2BP18089 450 aa16.78■□□□□ 0.28
ERCC3-205ENST00000460485 ITPK1Q13572 414 aa16.78■□□□□ 0.28
ERCC3-205ENST00000460485 PUM3Q15397 648 aaKnown RBP16.78■□□□□ 0.28
ERCC3-205ENST00000460485 CSPP1Q1MSJ5 1256 aa16.78■□□□□ 0.28
ERCC3-205ENST00000460485 PIM2Q9P1W9 311 aa16.78■□□□□ 0.28
ERCC3-205ENST00000460485 GOLGA6L3A6NEY3 463 aa16.77■□□□□ 0.28
ERCC3-205ENST00000460485 PDE8BO95263 885 aa16.77■□□□□ 0.28
ERCC3-205ENST00000460485 TIMM10P62072 90 aa16.77■□□□□ 0.28
ERCC3-205ENST00000460485 ZNF589Q86UQ0 364 aaPredicted RBP16.77■□□□□ 0.28
ERCC3-205ENST00000460485 VGLL2Q8N8G2 317 aa16.77■□□□□ 0.28
ERCC3-205ENST00000460485 LPIN2Q92539 896 aa16.77■□□□□ 0.28
ERCC3-205ENST00000460485 PUS3Q9BZE2 481 aaKnown RBP16.77■□□□□ 0.28
ERCC3-205ENST00000460485 GREM2Q9H772 168 aa16.77■□□□□ 0.28
ERCC3-205ENST00000460485 TBC1D2BQ9UPU7 963 aa16.77■□□□□ 0.28
ERCC3-205ENST00000460485 RTCBQ9Y3I0 505 aaKnown RBP16.77■□□□□ 0.28
ERCC3-205ENST00000460485 TNRC6CQ9HCJ0 1690 aaKnown RBP16.77■□□□□ 0.28
ERCC3-205ENST00000460485 ZC3H4Q9UPT8 1303 aaKnown RBP16.76■□□□□ 0.27
ERCC3-205ENST00000460485 FSD2A1L4K1 749 aa16.76■□□□□ 0.27
ERCC3-205ENST00000460485 SLC5A1P13866 664 aa16.76■□□□□ 0.27
ERCC3-205ENST00000460485 ARID4AP29374 1257 aaPredicted RBP16.76■□□□□ 0.27
ERCC3-205ENST00000460485 CDC5LQ99459 802 aaKnown RBP16.76■□□□□ 0.27
ERCC3-205ENST00000460485 PARP3Q9Y6F1 533 aa16.76■□□□□ 0.27
ERCC3-205ENST00000460485 NTSR2O95665 410 aa16.75■□□□□ 0.27
ERCC3-205ENST00000460485 IGHMBP2P38935 993 aaKnown RBP16.75■□□□□ 0.27
ERCC3-205ENST00000460485 APPBP2Q92624 585 aa16.75■□□□□ 0.27
ERCC3-205ENST00000460485 NEK1Q96PY6 1258 aa16.75■□□□□ 0.27
ERCC3-205ENST00000460485 RNF181Q9P0P0 153 aa16.75■□□□□ 0.27
ERCC3-205ENST00000460485 ZDHHC9Q9Y397 364 aa16.75■□□□□ 0.27
ERCC3-205ENST00000460485 KIF3AQ9Y496 699 aa16.75■□□□□ 0.27
ERCC3-205ENST00000460485 DDX49Q9Y6V7 483 aaKnown RBP16.75■□□□□ 0.27
ERCC3-205ENST00000460485 SBF1O95248 1867 aa16.75■□□□□ 0.27
ERCC3-205ENST00000460485 MAST3O60307 1309 aa16.74■□□□□ 0.27
ERCC3-205ENST00000460485 ZMYM6O95789 1325 aa16.74■□□□□ 0.27
ERCC3-205ENST00000460485 GYS1P13807 737 aa16.74■□□□□ 0.27
ERCC3-205ENST00000460485 MRE11P49959 708 aa16.74■□□□□ 0.27
ERCC3-205ENST00000460485 ADCK5Q3MIX3 580 aa16.74■□□□□ 0.27
ERCC3-205ENST00000460485 DALRD3Q5D0E6 543 aaKnown RBP16.74■□□□□ 0.27
ERCC3-205ENST00000460485 MCTP1Q6DN14 999 aa16.74■□□□□ 0.27
ERCC3-205ENST00000460485 FBXL16Q8N461 479 aa16.74■□□□□ 0.27
ERCC3-205ENST00000460485 TMEM87AQ8NBN3 555 aa16.74■□□□□ 0.27
ERCC3-205ENST00000460485 ARHGEF1Q92888 912 aaKnown RBP16.74■□□□□ 0.27
ERCC3-205ENST00000460485 SYAP1Q96A49 352 aaPredicted RBP16.74■□□□□ 0.27
ERCC3-205ENST00000460485 NYXQ9GZU5 481 aa16.74■□□□□ 0.27
ERCC3-205ENST00000460485 CARMIL3Q8ND23 1372 aa16.74■□□□□ 0.27
ERCC3-205ENST00000460485 MYH13Q9UKX3 1938 aa16.74■□□□□ 0.27
ERCC3-205ENST00000460485 C4AP0C0L4 1744 aa16.73■□□□□ 0.27
ERCC3-205ENST00000460485 WDR19Q8NEZ3 1342 aa16.73■□□□□ 0.27
ERCC3-205ENST00000460485 TCHHQ07283 1943 aa16.73■□□□□ 0.27
ERCC3-205ENST00000460485 VEGFAP15692 232 aaPredicted RBP16.73■□□□□ 0.27
ERCC3-205ENST00000460485 UBE3CQ15386 1083 aa16.73■□□□□ 0.27
ERCC3-205ENST00000460485 SUSD4Q5VX71 490 aa16.73■□□□□ 0.27
ERCC3-205ENST00000460485 EDC3Q96F86 508 aaKnown RBP16.73■□□□□ 0.27
ERCC3-205ENST00000460485 MPHOSPH8Q99549 860 aa16.73■□□□□ 0.27
ERCC3-205ENST00000460485 NIP7Q9Y221 180 aaKnown RBP eCLIP16.73■□□□□ 0.27
ERCC3-205ENST00000460485 ZBTB22O15209 634 aa16.72■□□□□ 0.27
ERCC3-205ENST00000460485 STX6O43752 255 aa16.72■□□□□ 0.27
ERCC3-205ENST00000460485 IGSF3O75054 1194 aa16.72■□□□□ 0.27
ERCC3-205ENST00000460485 ZSCAN22P10073 491 aaPredicted RBP16.72■□□□□ 0.27
ERCC3-205ENST00000460485 NCLP19338 710 aaKnown RBP16.72■□□□□ 0.27
ERCC3-205ENST00000460485 FGFR2P21802 821 aa16.72■□□□□ 0.27
ERCC3-205ENST00000460485 TMED8Q6PL24 325 aaPredicted RBP16.72■□□□□ 0.27
ERCC3-205ENST00000460485 NOL8Q76FK4 1167 aaKnown RBP16.72■□□□□ 0.27
ERCC3-205ENST00000460485 LLPHQ9BRT6 129 aaKnown RBP16.72■□□□□ 0.27
ERCC3-205ENST00000460485 LMBRD1Q9NUN5 540 aa16.72■□□□□ 0.27
ERCC3-205ENST00000460485 MYH15Q9Y2K3 1946 aa16.71■□□□□ 0.27
ERCC3-205ENST00000460485 RPS6KA4O75676 772 aa16.71■□□□□ 0.27
ERCC3-205ENST00000460485 RFC4P35249 363 aa16.71■□□□□ 0.27
ERCC3-205ENST00000460485 MYO5AQ9Y4I1 1855 aaKnown RBP16.7■□□□□ 0.26
ERCC3-205ENST00000460485 MAST2Q6P0Q8 1798 aa16.7■□□□□ 0.26
ERCC3-205ENST00000460485 CYP21A2P08686 494 aa16.7■□□□□ 0.26
ERCC3-205ENST00000460485 HSPD1P10809 573 aaKnown RBP16.7■□□□□ 0.26
ERCC3-205ENST00000460485 ADORA1P30542 326 aa16.7■□□□□ 0.26
ERCC3-205ENST00000460485 FKBP4Q02790 459 aaKnown RBP eCLIP16.7■□□□□ 0.26
ERCC3-205ENST00000460485 PKP1Q13835 747 aa16.7■□□□□ 0.26
ERCC3-205ENST00000460485 SF3B3Q15393 1217 aaKnown RBP16.7■□□□□ 0.26
ERCC3-205ENST00000460485 IMMTQ16891 758 aaKnown RBP16.7■□□□□ 0.26
ERCC3-205ENST00000460485 DHX32Q7L7V1 743 aaKnown RBP16.7■□□□□ 0.26
ERCC3-205ENST00000460485 RGS22Q8NE09 1264 aa16.7■□□□□ 0.26
ERCC3-205ENST00000460485 AGXT2Q9BYV1 514 aa16.7■□□□□ 0.26
ERCC3-205ENST00000460485 NARFQ9UHQ1 456 aa16.7■□□□□ 0.26
ERCC3-205ENST00000460485 TIAM2Q8IVF5 1701 aa16.7■□□□□ 0.26
ERCC3-205ENST00000460485 GLTPD2A6NH11 291 aa16.69■□□□□ 0.26
ERCC3-205ENST00000460485 ZNF445P59923 1031 aa16.69■□□□□ 0.26
ERCC3-205ENST00000460485 ME3Q16798 604 aa16.69■□□□□ 0.26
ERCC3-205ENST00000460485 SLC10A5Q5PT55 438 aa16.69■□□□□ 0.26
ERCC3-205ENST00000460485 CCDC83Q8IWF9 413 aa16.69■□□□□ 0.26
ERCC3-205ENST00000460485 DUOX1Q9NRD9 1551 aa16.68■□□□□ 0.26
ERCC3-205ENST00000460485 F13A1P00488 732 aa16.68■□□□□ 0.26
ERCC3-205ENST00000460485 SYT1P21579 422 aa16.68■□□□□ 0.26
ERCC3-205ENST00000460485 GJB2P29033 226 aa16.68■□□□□ 0.26
ERCC3-205ENST00000460485 ADD2P35612 726 aa16.68■□□□□ 0.26
ERCC3-205ENST00000460485 MCAMP43121 646 aa16.68■□□□□ 0.26
ERCC3-205ENST00000460485 ZAP70P43403 619 aa16.68■□□□□ 0.26
ERCC3-205ENST00000460485 HMGN5P82970 282 aaKnown RBP16.68■□□□□ 0.26
ERCC3-205ENST00000460485 TOB2Q14106 344 aaPredicted RBP16.68■□□□□ 0.26
ERCC3-205ENST00000460485 WASHC4Q2M389 1173 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms