RNA–Protein interactions for RNA: ENST00000460064.1

CCDC50-203, Transcript of coiled-coil domain containing 50, humanhuman

TSL 2

Gene CCDC50, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-203ENST00000460064 RPS26P11Q5JNZ5 115 aaPredicted RBP8.64□□□□□ -1.03
CCDC50-203ENST00000460064 GDF6Q6KF10 455 aaPredicted RBP8.64□□□□□ -1.03
CCDC50-203ENST00000460064 MDFIQ99750 246 aa8.64□□□□□ -1.03
CCDC50-203ENST00000460064 GPN3Q9UHW5 284 aaPredicted RBP8.64□□□□□ -1.03
CCDC50-203ENST00000460064 TRIM33Q9UPN9 1127 aa8.64□□□□□ -1.03
CCDC50-203ENST00000460064 INPP5FQ9Y2H2 1132 aa8.64□□□□□ -1.03
CCDC50-203ENST00000460064 ERBB4Q15303 1308 aa8.63□□□□□ -1.03
CCDC50-203ENST00000460064 FAAP100Q0VG06 881 aa8.63□□□□□ -1.03
CCDC50-203ENST00000460064 NFX1Q12986 1120 aaKnown RBP8.63□□□□□ -1.03
CCDC50-203ENST00000460064 SREK1Q8WXA9 508 aaKnown RBP8.63□□□□□ -1.03
CCDC50-203ENST00000460064 IRF7Q92985 503 aa8.63□□□□□ -1.03
CCDC50-203ENST00000460064 DRC1Q96MC2 740 aa8.63□□□□□ -1.03
CCDC50-203ENST00000460064 NECAB3Q96P71 396 aaPredicted RBP8.63□□□□□ -1.03
CCDC50-203ENST00000460064 CLEC4MQ9H2X3 399 aaPredicted RBP8.63□□□□□ -1.03
CCDC50-203ENST00000460064 SH2B1Q9NRF2 756 aaPredicted RBP8.63□□□□□ -1.03
CCDC50-203ENST00000460064 PPP1R1BQ9UD71 204 aaPredicted RBP8.63□□□□□ -1.03
CCDC50-203ENST00000460064 CELA3AP09093 270 aa8.62□□□□□ -1.03
CCDC50-203ENST00000460064 ADAMTSL4Q6UY14 1074 aa8.62□□□□□ -1.03
CCDC50-203ENST00000460064 TTC9Q92623 222 aa8.62□□□□□ -1.03
CCDC50-203ENST00000460064 TINF2Q9BSI4 451 aa8.62□□□□□ -1.03
CCDC50-203ENST00000460064 ADAM19Q9H013 955 aa8.62□□□□□ -1.03
CCDC50-203ENST00000460064 TMEM39AQ9NV64 488 aa8.62□□□□□ -1.03
CCDC50-203ENST00000460064 EPXP11678 715 aa8.61□□□□□ -1.03
CCDC50-203ENST00000460064 CDC27P30260 824 aa8.61□□□□□ -1.03
CCDC50-203ENST00000460064 PPP2R3AQ06190 1150 aa8.61□□□□□ -1.03
CCDC50-203ENST00000460064 PCDH1Q08174 1060 aa8.61□□□□□ -1.03
CCDC50-203ENST00000460064 SF3A1Q15459 793 aaKnown RBP8.61□□□□□ -1.03
CCDC50-203ENST00000460064 SLCO4C1Q6ZQN7 724 aa8.61□□□□□ -1.03
CCDC50-203ENST00000460064 VN1R5Q7Z5H4 357 aa8.61□□□□□ -1.03
CCDC50-203ENST00000460064 TMEM74Q96NL1 305 aa8.61□□□□□ -1.03
CCDC50-203ENST00000460064 JPH1Q9HDC5 661 aaPredicted RBP8.61□□□□□ -1.03
CCDC50-203ENST00000460064 SOX13Q9UN79 622 aa8.61□□□□□ -1.03
CCDC50-203ENST00000460064 ENC1O14682 589 aa8.6□□□□□ -1.03
CCDC50-203ENST00000460064 ADAMTS2O95450 1211 aa8.6□□□□□ -1.03
CCDC50-203ENST00000460064 CABP4P57796 275 aa8.6□□□□□ -1.03
CCDC50-203ENST00000460064 ZNF423Q2M1K9 1284 aa8.6□□□□□ -1.03
CCDC50-203ENST00000460064 CACTIN-AS1Q8N1I8 211 aa8.6□□□□□ -1.03
CCDC50-203ENST00000460064 IL22RA1Q8N6P7 574 aa8.6□□□□□ -1.03
CCDC50-203ENST00000460064 SLC43A3Q8NBI5 491 aa8.6□□□□□ -1.03
CCDC50-203ENST00000460064 GALNT6Q8NCL4 622 aa8.6□□□□□ -1.03
CCDC50-203ENST00000460064 ACDQ96AP0 544 aa8.6□□□□□ -1.03
CCDC50-203ENST00000460064 STARD13Q9Y3M8 1113 aa8.6□□□□□ -1.03
CCDC50-203ENST00000460064 CDC25BP30305 580 aa8.59□□□□□ -1.03
CCDC50-203ENST00000460064 EIF4A3P38919 411 aaKnown RBP8.59□□□□□ -1.03
CCDC50-203ENST00000460064 LIG3P49916 1009 aa8.59□□□□□ -1.03
CCDC50-203ENST00000460064 KRT76Q01546 638 aa8.59□□□□□ -1.03
CCDC50-203ENST00000460064 TTBK2Q6IQ55 1244 aa8.59□□□□□ -1.03
CCDC50-203ENST00000460064 C1orf229Q6ZS94 237 aaPredicted RBP8.59□□□□□ -1.03
CCDC50-203ENST00000460064 VPS37DQ86XT2 251 aa8.59□□□□□ -1.03
CCDC50-203ENST00000460064 EDARADDQ8WWZ3 215 aa8.59□□□□□ -1.03
CCDC50-203ENST00000460064 SPON2Q9BUD6 331 aa8.59□□□□□ -1.03
CCDC50-203ENST00000460064 TANGO6Q9C0B7 1094 aa8.59□□□□□ -1.03
CCDC50-203ENST00000460064 TLR6Q9Y2C9 796 aa8.59□□□□□ -1.03
CCDC50-203ENST00000460064 PAGE1O75459 146 aa8.58□□□□□ -1.04
CCDC50-203ENST00000460064 DNAJA1P31689 397 aaKnown RBP8.58□□□□□ -1.04
CCDC50-203ENST00000460064 PAK2Q13177 524 aa8.58□□□□□ -1.04
CCDC50-203ENST00000460064 IKBKEQ14164 716 aa8.58□□□□□ -1.04
CCDC50-203ENST00000460064 PRKAG2Q9UGJ0 569 aa8.58□□□□□ -1.04
CCDC50-203ENST00000460064 SAMM50Q9Y512 469 aa8.58□□□□□ -1.04
CCDC50-203ENST00000460064 SOX1O00570 391 aaPredicted RBP8.57□□□□□ -1.04
CCDC50-203ENST00000460064 LILRB5O75023 590 aa8.57□□□□□ -1.04
CCDC50-203ENST00000460064 PF4P02776 101 aa8.57□□□□□ -1.04
CCDC50-203ENST00000460064 ESRRAP11474 423 aaPredicted RBP8.57□□□□□ -1.04
CCDC50-203ENST00000460064 LMNB1P20700 586 aa8.57□□□□□ -1.04
CCDC50-203ENST00000460064 PCNX4Q63HM2 1172 aa8.57□□□□□ -1.04
CCDC50-203ENST00000460064 C20orf204Q6ZNR8 217 aa8.57□□□□□ -1.04
CCDC50-203ENST00000460064 KIAA0825Q8IV33 1275 aa8.57□□□□□ -1.04
CCDC50-203ENST00000460064 PHC3Q8NDX5 983 aa8.57□□□□□ -1.04
CCDC50-203ENST00000460064 ZNF296Q8WUU4 475 aaPredicted RBP8.57□□□□□ -1.04
CCDC50-203ENST00000460064 ADAMTS1Q9UHI8 967 aa8.57□□□□□ -1.04
CCDC50-203ENST00000460064 PPME1Q9Y570 386 aa8.57□□□□□ -1.04
CCDC50-203ENST00000460064 B3GALT4O96024 378 aa8.56□□□□□ -1.04
CCDC50-203ENST00000460064 ALBP02768 609 aa8.56□□□□□ -1.04
CCDC50-203ENST00000460064 EPHA1P21709 976 aa8.56□□□□□ -1.04
CCDC50-203ENST00000460064 AFF1P51825 1210 aaKnown RBP8.56□□□□□ -1.04
CCDC50-203ENST00000460064 ARID5AQ03989 594 aa8.56□□□□□ -1.04
CCDC50-203ENST00000460064 FAM160A1Q05DH4 1040 aa8.56□□□□□ -1.04
CCDC50-203ENST00000460064 CAMK2GQ13555 558 aaPredicted RBP8.56□□□□□ -1.04
CCDC50-203ENST00000460064 GRIK5Q16478 980 aa8.56□□□□□ -1.04
CCDC50-203ENST00000460064 KANK3Q6NY19 840 aa8.56□□□□□ -1.04
CCDC50-203ENST00000460064 AGMOQ6ZNB7 445 aa8.56□□□□□ -1.04
CCDC50-203ENST00000460064 DDX54Q8TDD1 881 aaKnown RBP8.56□□□□□ -1.04
CCDC50-203ENST00000460064 BTBD6Q96KE9 485 aa8.56□□□□□ -1.04
CCDC50-203ENST00000460064 H3BRJ5 948 aa8.55□□□□□ -1.04
CCDC50-203ENST00000460064 LINC01387J3KSC0 135 aa8.55□□□□□ -1.04
CCDC50-203ENST00000460064 M0R082 166 aa8.55□□□□□ -1.04
CCDC50-203ENST00000460064 OIP5O43482 229 aa8.55□□□□□ -1.04
CCDC50-203ENST00000460064 BMP6P22004 513 aa8.55□□□□□ -1.04
CCDC50-203ENST00000460064 NME2P22392 152 aa8.55□□□□□ -1.04
CCDC50-203ENST00000460064 RPS26P62854 115 aaKnown RBP8.55□□□□□ -1.04
CCDC50-203ENST00000460064 FAM117BQ6P1L5 589 aa8.55□□□□□ -1.04
CCDC50-203ENST00000460064 FBXL19Q6PCT2 694 aa8.55□□□□□ -1.04
CCDC50-203ENST00000460064 C8orf86Q6ZUL3 223 aa8.55□□□□□ -1.04
CCDC50-203ENST00000460064 ZNF417Q8TAU3 575 aa8.55□□□□□ -1.04
CCDC50-203ENST00000460064 SLC7A3Q8WY07 619 aa8.55□□□□□ -1.04
CCDC50-203ENST00000460064 GPRASP2Q96D09 838 aa8.55□□□□□ -1.04
CCDC50-203ENST00000460064 ZNF587Q96SQ5 575 aaPredicted RBP8.55□□□□□ -1.04
CCDC50-203ENST00000460064 CBX8Q9HC52 389 aa8.55□□□□□ -1.04
CCDC50-203ENST00000460064 TFE3P19532 575 aaPredicted RBP8.54□□□□□ -1.04
CCDC50-203ENST00000460064 ATP2B1P20020 1258 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms