RNA–Protein interactions for RNA: ENST00000460002.1

PCOLCE-202, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 3

Gene PCOLCE, Length 447 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-202ENST00000460002 GUCD1Q96NT3 240 aa17.79■□□□□ 0.44
PCOLCE-202ENST00000460002 SRRDQ9UH36 339 aa17.79■□□□□ 0.44
PCOLCE-202ENST00000460002 ATP5J2-PTCD1G3V325 749 aa17.78■□□□□ 0.44
PCOLCE-202ENST00000460002 PCDHAC2Q9Y5I4 1007 aa17.78■□□□□ 0.44
PCOLCE-202ENST00000460002 MED23Q9ULK4 1368 aa17.78■□□□□ 0.44
PCOLCE-202ENST00000460002 ZNF804BA4D1E1 1349 aa17.77■□□□□ 0.44
PCOLCE-202ENST00000460002 SGPL1O95470 568 aa17.77■□□□□ 0.44
PCOLCE-202ENST00000460002 GTF2A2P52657 109 aa17.77■□□□□ 0.44
PCOLCE-202ENST00000460002 TDHQ8IZJ6 230 aa17.77■□□□□ 0.44
PCOLCE-202ENST00000460002 RAET1EQ8TD07 263 aa17.77■□□□□ 0.44
PCOLCE-202ENST00000460002 TRIM47Q96LD4 638 aa17.77■□□□□ 0.44
PCOLCE-202ENST00000460002 UNC93B1Q9H1C4 597 aa17.77■□□□□ 0.44
PCOLCE-202ENST00000460002 NUDCQ9Y266 331 aa17.77■□□□□ 0.44
PCOLCE-202ENST00000460002 OSBPP22059 807 aa17.76■□□□□ 0.43
PCOLCE-202ENST00000460002 ZMYND8Q9ULU4 1186 aaPredicted RBP17.76■□□□□ 0.43
PCOLCE-202ENST00000460002 OTOFQ9HC10 1997 aa17.76■□□□□ 0.43
PCOLCE-202ENST00000460002 CLRN2A0PK11 232 aa17.75■□□□□ 0.43
PCOLCE-202ENST00000460002 PLA2G5P39877 138 aa17.75■□□□□ 0.43
PCOLCE-202ENST00000460002 PSMC4P43686 418 aa17.75■□□□□ 0.43
PCOLCE-202ENST00000460002 DLGAP5Q15398 846 aa17.75■□□□□ 0.43
PCOLCE-202ENST00000460002 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.75■□□□□ 0.43
PCOLCE-202ENST00000460002 CFAP53Q96M91 514 aa17.75■□□□□ 0.43
PCOLCE-202ENST00000460002 BIN2Q9UBW5 565 aaPredicted RBP17.75■□□□□ 0.43
PCOLCE-202ENST00000460002 EYSQ5T1H1 3165 aa17.75■□□□□ 0.43
PCOLCE-202ENST00000460002 AOX1Q06278 1338 aa17.74■□□□□ 0.43
PCOLCE-202ENST00000460002 UBXN2AP68543 259 aa17.74■□□□□ 0.43
PCOLCE-202ENST00000460002 TTLL5Q6EMB2 1281 aa17.74■□□□□ 0.43
PCOLCE-202ENST00000460002 TXNRD3Q86VQ6 643 aa17.74■□□□□ 0.43
PCOLCE-202ENST00000460002 C7orf61Q8IZ16 206 aa17.74■□□□□ 0.43
PCOLCE-202ENST00000460002 COA1Q9GZY4 146 aa17.74■□□□□ 0.43
PCOLCE-202ENST00000460002 ALPK3Q96L96 1907 aa17.74■□□□□ 0.43
PCOLCE-202ENST00000460002 MYPNQ86TC9 1320 aa17.73■□□□□ 0.43
PCOLCE-202ENST00000460002 MAGEA10P43363 369 aaPredicted RBP17.73■□□□□ 0.43
PCOLCE-202ENST00000460002 C17orf99Q6UX52 265 aa17.73■□□□□ 0.43
PCOLCE-202ENST00000460002 MTMR14Q8NCE2 650 aa17.73■□□□□ 0.43
PCOLCE-202ENST00000460002 PLBD2Q8NHP8 589 aa17.73■□□□□ 0.43
PCOLCE-202ENST00000460002 CCDC85AQ96PX6 553 aaPredicted RBP17.73■□□□□ 0.43
PCOLCE-202ENST00000460002 IRS2Q9Y4H2 1338 aa17.72■□□□□ 0.43
PCOLCE-202ENST00000460002 BTBD19C9JJ37 291 aa17.72■□□□□ 0.43
PCOLCE-202ENST00000460002 WDHD1O75717 1129 aaPredicted RBP17.72■□□□□ 0.43
PCOLCE-202ENST00000460002 VGLL4Q14135 290 aa17.72■□□□□ 0.43
PCOLCE-202ENST00000460002 RASA3Q14644 834 aa17.72■□□□□ 0.43
PCOLCE-202ENST00000460002 PAWRQ96IZ0 340 aaKnown RBP17.72■□□□□ 0.43
PCOLCE-202ENST00000460002 VEZTQ9HBM0 779 aa17.72■□□□□ 0.43
PCOLCE-202ENST00000460002 TSPYL4Q9UJ04 414 aa17.72■□□□□ 0.43
PCOLCE-202ENST00000460002 TTC28Q96AY4 2481 aa17.72■□□□□ 0.43
PCOLCE-202ENST00000460002 MUC3AQ02505 3323 aa17.71■□□□□ 0.43
PCOLCE-202ENST00000460002 POTEB2H3BUK9 544 aa17.71■□□□□ 0.43
PCOLCE-202ENST00000460002 TFRCP02786 760 aaKnown RBP17.71■□□□□ 0.43
PCOLCE-202ENST00000460002 SYN1P17600 705 aa17.71■□□□□ 0.43
PCOLCE-202ENST00000460002 HOXD10P28358 340 aa17.71■□□□□ 0.43
PCOLCE-202ENST00000460002 GTF2IP78347 998 aa17.71■□□□□ 0.43
PCOLCE-202ENST00000460002 CCDC152Q4G0S7 254 aa17.71■□□□□ 0.43
PCOLCE-202ENST00000460002 ANKRD18AQ8IVF6 992 aa17.71■□□□□ 0.43
PCOLCE-202ENST00000460002 FAM161BQ96MY7 647 aa17.71■□□□□ 0.43
PCOLCE-202ENST00000460002 ZCCHC17Q9NP64 241 aaKnown RBP17.71■□□□□ 0.43
PCOLCE-202ENST00000460002 CPA4Q9UI42 421 aa17.71■□□□□ 0.43
PCOLCE-202ENST00000460002 FMNL1O95466 1100 aaPredicted RBP17.7■□□□□ 0.42
PCOLCE-202ENST00000460002 FAM109BQ6ICB4 259 aaPredicted RBP17.7■□□□□ 0.42
PCOLCE-202ENST00000460002 CDAN1Q8IWY9 1227 aa17.7■□□□□ 0.42
PCOLCE-202ENST00000460002 DIS3LQ8TF46 1054 aaKnown RBP17.7■□□□□ 0.42
PCOLCE-202ENST00000460002 PRMT6Q96LA8 375 aaPredicted RBP17.7■□□□□ 0.42
PCOLCE-202ENST00000460002 DLG5Q8TDM6 1919 aa17.7■□□□□ 0.42
PCOLCE-202ENST00000460002 SPDYE2BA6NHP3 402 aa17.69■□□□□ 0.42
PCOLCE-202ENST00000460002 SPDYE6P0CI01 402 aa17.69■□□□□ 0.42
PCOLCE-202ENST00000460002 PRKCZQ05513 592 aa17.69■□□□□ 0.42
PCOLCE-202ENST00000460002 TRIM28Q13263 835 aaKnown RBP17.69■□□□□ 0.42
PCOLCE-202ENST00000460002 CERS5Q8N5B7 392 aa17.69■□□□□ 0.42
PCOLCE-202ENST00000460002 HELBQ8NG08 1087 aaPredicted RBP17.69■□□□□ 0.42
PCOLCE-202ENST00000460002 DEFB118Q96PH6 123 aa17.69■□□□□ 0.42
PCOLCE-202ENST00000460002 UBE2OQ9C0C9 1292 aaKnown RBP17.69■□□□□ 0.42
PCOLCE-202ENST00000460002 CETPP11597 493 aa17.68■□□□□ 0.42
PCOLCE-202ENST00000460002 KLRK1P26718 216 aa17.68■□□□□ 0.42
PCOLCE-202ENST00000460002 CCT4P50991 539 aaKnown RBP17.68■□□□□ 0.42
PCOLCE-202ENST00000460002 CFAP100Q494V2 611 aa17.68■□□□□ 0.42
PCOLCE-202ENST00000460002 ZBTB38Q8NAP3 1195 aaPredicted RBP17.68■□□□□ 0.42
PCOLCE-202ENST00000460002 SLAIN1Q8ND83 568 aa17.68■□□□□ 0.42
PCOLCE-202ENST00000460002 FAM122AQ96E09 287 aa17.68■□□□□ 0.42
PCOLCE-202ENST00000460002 TIMELESSQ9UNS1 1208 aa17.68■□□□□ 0.42
PCOLCE-202ENST00000460002 MINPP1Q9UNW1 487 aa17.68■□□□□ 0.42
PCOLCE-202ENST00000460002 MYO1BO43795 1136 aa17.67■□□□□ 0.42
PCOLCE-202ENST00000460002 HOXD11P31277 338 aaPredicted RBP17.67■□□□□ 0.42
PCOLCE-202ENST00000460002 MAP3K9P80192 1104 aa17.67■□□□□ 0.42
PCOLCE-202ENST00000460002 NECAB2Q7Z6G3 386 aa17.67■□□□□ 0.42
PCOLCE-202ENST00000460002 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.67■□□□□ 0.42
PCOLCE-202ENST00000460002 CRISPLD2Q9H0B8 497 aa17.67■□□□□ 0.42
PCOLCE-202ENST00000460002 CHPF2Q9P2E5 772 aa17.67■□□□□ 0.42
PCOLCE-202ENST00000460002 GABRQQ9UN88 632 aa17.67■□□□□ 0.42
PCOLCE-202ENST00000460002 ECM29Q5VYK3 1845 aa17.67■□□□□ 0.42
PCOLCE-202ENST00000460002 SPDYE5A6NIY4 337 aa17.66■□□□□ 0.42
PCOLCE-202ENST00000460002 SYMPKQ92797 1274 aaKnown RBP17.66■□□□□ 0.42
PCOLCE-202ENST00000460002 TEPSINQ96N21 525 aa17.66■□□□□ 0.42
PCOLCE-202ENST00000460002 ADGRA2Q96PE1 1338 aa17.66■□□□□ 0.42
PCOLCE-202ENST00000460002 PRUNE2Q8WUY3 3088 aa17.66■□□□□ 0.42
PCOLCE-202ENST00000460002 F8W031 263 aaPredicted RBP17.65■□□□□ 0.42
PCOLCE-202ENST00000460002 PDE8AO60658 829 aa17.65■□□□□ 0.42
PCOLCE-202ENST00000460002 CAPN2P17655 700 aa17.65■□□□□ 0.42
PCOLCE-202ENST00000460002 NFE2L2Q16236 605 aa17.65■□□□□ 0.42
PCOLCE-202ENST00000460002 MAFAQ8NHW3 353 aaPredicted RBP17.65■□□□□ 0.42
PCOLCE-202ENST00000460002 JARID2Q92833 1246 aaPredicted RBP17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms