RNA–Protein interactions for RNA: ENST00000459927.5

GPNMB-204, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 577 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-204ENST00000459927 FANCIQ9NVI1 1328 aa15.69■□□□□ 0.1
GPNMB-204ENST00000459927 SREBF2Q12772 1141 aa15.69■□□□□ 0.1
GPNMB-204ENST00000459927 MAP3K11Q16584 847 aa15.69■□□□□ 0.1
GPNMB-204ENST00000459927 EPHA10Q5JZY3 1008 aa15.69■□□□□ 0.1
GPNMB-204ENST00000459927 LMBR1LQ6UX01 489 aa15.69■□□□□ 0.1
GPNMB-204ENST00000459927 FZD1Q9UP38 647 aa15.69■□□□□ 0.1
GPNMB-204ENST00000459927 PCDHAC2Q9Y5I4 1007 aa15.69■□□□□ 0.1
GPNMB-204ENST00000459927 CACNA1FO60840 1977 aa15.69■□□□□ 0.1
GPNMB-204ENST00000459927 SPEF2Q9C093 1822 aa15.68■□□□□ 0.1
GPNMB-204ENST00000459927 PLIN1O60240 522 aa15.68■□□□□ 0.1
GPNMB-204ENST00000459927 FKBP1AP62942 108 aaKnown RBP15.68■□□□□ 0.1
GPNMB-204ENST00000459927 LDHAL6AQ6ZMR3 332 aa15.68■□□□□ 0.1
GPNMB-204ENST00000459927 ZNF594Q96JF6 807 aaPredicted RBP15.68■□□□□ 0.1
GPNMB-204ENST00000459927 CHMP3Q9Y3E7 222 aa15.68■□□□□ 0.1
GPNMB-204ENST00000459927 ZNF646O15015 1829 aaPredicted RBP15.68■□□□□ 0.1
GPNMB-204ENST00000459927 TNRC18O15417 2968 aaPredicted RBP15.67■□□□□ 0.1
GPNMB-204ENST00000459927 F8W031 263 aaPredicted RBP15.67■□□□□ 0.1
GPNMB-204ENST00000459927 PPP1R12BO60237 982 aaPredicted RBP15.67■□□□□ 0.1
GPNMB-204ENST00000459927 FKTNO75072 461 aa15.67■□□□□ 0.1
GPNMB-204ENST00000459927 CCDC57Q2TAC2 916 aa15.67■□□□□ 0.1
GPNMB-204ENST00000459927 SUPT20HL1Q3ZLR7 823 aa15.67■□□□□ 0.1
GPNMB-204ENST00000459927 CFAP100Q494V2 611 aa15.67■□□□□ 0.1
GPNMB-204ENST00000459927 ZNF804AQ7Z570 1209 aa15.67■□□□□ 0.1
GPNMB-204ENST00000459927 MRS2Q9HD23 443 aa15.67■□□□□ 0.1
GPNMB-204ENST00000459927 SPINK5Q9NQ38 1064 aaPredicted RBP15.67■□□□□ 0.1
GPNMB-204ENST00000459927 UNCXA6NJT0 531 aa15.66■□□□□ 0.1
GPNMB-204ENST00000459927 USP2O75604 605 aaPredicted RBP15.66■□□□□ 0.1
GPNMB-204ENST00000459927 ALDH1A1P00352 501 aa15.66■□□□□ 0.1
GPNMB-204ENST00000459927 NBPF12Q5TAG4 269 aaPredicted RBP15.66■□□□□ 0.1
GPNMB-204ENST00000459927 PPP2R3BQ9Y5P8 575 aa15.66■□□□□ 0.1
GPNMB-204ENST00000459927 SPDYE2BA6NHP3 402 aa15.65■□□□□ 0.1
GPNMB-204ENST00000459927 MANSC4A6NHS7 340 aaPredicted RBP15.65■□□□□ 0.1
GPNMB-204ENST00000459927 GRM8O00222 908 aa15.65■□□□□ 0.1
GPNMB-204ENST00000459927 MYO1BO43795 1136 aa15.65■□□□□ 0.1
GPNMB-204ENST00000459927 SPDYE6P0CI01 402 aa15.65■□□□□ 0.1
GPNMB-204ENST00000459927 FBXO46Q6PJ61 603 aaPredicted RBP15.65■□□□□ 0.1
GPNMB-204ENST00000459927 IFNL1Q8IU54 200 aa15.65■□□□□ 0.1
GPNMB-204ENST00000459927 TDRD7Q8NHU6 1098 aaKnown RBP15.65■□□□□ 0.1
GPNMB-204ENST00000459927 CLMNQ96JQ2 1002 aa15.65■□□□□ 0.1
GPNMB-204ENST00000459927 CNNM1Q9NRU3 951 aa15.65■□□□□ 0.1
GPNMB-204ENST00000459927 C9orf78Q9NZ63 289 aaPredicted RBP15.65■□□□□ 0.1
GPNMB-204ENST00000459927 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.65■□□□□ 0.1
GPNMB-204ENST00000459927 PDE4DIPQ5VU43 2346 aa15.65■□□□□ 0.1
GPNMB-204ENST00000459927 CLRN2A0PK11 232 aa15.64■□□□□ 0.09
GPNMB-204ENST00000459927 RBM5P52756 815 aaKnown RBP eCLIP15.64■□□□□ 0.09
GPNMB-204ENST00000459927 FAM84BQ96KN1 310 aaPredicted RBP15.64■□□□□ 0.09
GPNMB-204ENST00000459927 JAG2Q9Y219 1238 aa15.64■□□□□ 0.09
GPNMB-204ENST00000459927 FAM205AQ6ZU69 1335 aa15.64■□□□□ 0.09
GPNMB-204ENST00000459927 ALDH1L1O75891 902 aa15.63■□□□□ 0.09
GPNMB-204ENST00000459927 ZBTB48P10074 688 aaPredicted RBP15.63■□□□□ 0.09
GPNMB-204ENST00000459927 UBE4AQ14139 1066 aa15.63■□□□□ 0.09
GPNMB-204ENST00000459927 RASA3Q14644 834 aa15.63■□□□□ 0.09
GPNMB-204ENST00000459927 TAF7LQ5H9L4 462 aa15.63■□□□□ 0.09
GPNMB-204ENST00000459927 WNK4Q96J92 1243 aa15.63■□□□□ 0.09
GPNMB-204ENST00000459927 AOX1Q06278 1338 aa15.63■□□□□ 0.09
GPNMB-204ENST00000459927 HIBADHP31937 336 aaKnown RBP15.62■□□□□ 0.09
GPNMB-204ENST00000459927 KAZALD1Q96I82 304 aa15.62■□□□□ 0.09
GPNMB-204ENST00000459927 PUS3Q9BZE2 481 aaKnown RBP15.62■□□□□ 0.09
GPNMB-204ENST00000459927 VEZTQ9HBM0 779 aa15.62■□□□□ 0.09
GPNMB-204ENST00000459927 RIPOR2Q9Y4F9 1068 aa15.62■□□□□ 0.09
GPNMB-204ENST00000459927 IGF2BP3O00425 579 aaKnown RBP eCLIP15.61■□□□□ 0.09
GPNMB-204ENST00000459927 ANP32CO43423 234 aa15.61■□□□□ 0.09
GPNMB-204ENST00000459927 GYG1P46976 350 aa15.61■□□□□ 0.09
GPNMB-204ENST00000459927 IREB2P48200 963 aaKnown RBP15.61■□□□□ 0.09
GPNMB-204ENST00000459927 SLC4A10Q6U841 1118 aa15.61■□□□□ 0.09
GPNMB-204ENST00000459927 SRCIN1Q9C0H9 1055 aa15.61■□□□□ 0.09
GPNMB-204ENST00000459927 ZNF70Q9UC06 446 aaPredicted RBP15.61■□□□□ 0.09
GPNMB-204ENST00000459927 COL1A1P02452 1464 aaPredicted RBP15.6■□□□□ 0.09
GPNMB-204ENST00000459927 TESPA1A2RU30 521 aaPredicted RBP15.6■□□□□ 0.09
GPNMB-204ENST00000459927 MFSD14BQ5SR56 506 aa15.6■□□□□ 0.09
GPNMB-204ENST00000459927 FBXO33Q7Z6M2 555 aa15.6■□□□□ 0.09
GPNMB-204ENST00000459927 ANKRD13AQ8IZ07 590 aa15.6■□□□□ 0.09
GPNMB-204ENST00000459927 PTPN18Q99952 460 aa15.6■□□□□ 0.09
GPNMB-204ENST00000459927 TDRD3Q9H7E2 651 aaKnown RBP15.6■□□□□ 0.09
GPNMB-204ENST00000459927 SERPINA10Q9UK55 444 aa15.6■□□□□ 0.09
GPNMB-204ENST00000459927 TTF2Q9UNY4 1162 aaKnown RBP15.6■□□□□ 0.09
GPNMB-204ENST00000459927 NBPF7P0C2Y1 421 aaPredicted RBP15.59■□□□□ 0.09
GPNMB-204ENST00000459927 GJA5P36382 358 aa15.59■□□□□ 0.09
GPNMB-204ENST00000459927 SPDYE2Q495Y8 402 aa15.59■□□□□ 0.09
GPNMB-204ENST00000459927 OTUD7BQ6GQQ9 843 aa15.59■□□□□ 0.09
GPNMB-204ENST00000459927 DZIP1LQ8IYY4 767 aaKnown RBP15.59■□□□□ 0.09
GPNMB-204ENST00000459927 SUCLG2Q96I99 432 aa15.59■□□□□ 0.09
GPNMB-204ENST00000459927 PCDH10Q9P2E7 1040 aa15.59■□□□□ 0.09
GPNMB-204ENST00000459927 TRIM17Q9Y577 477 aa15.59■□□□□ 0.09
GPNMB-204ENST00000459927 PRPF38BQ5VTL8 546 aaKnown RBP15.58■□□□□ 0.08
GPNMB-204ENST00000459927 OTOP1Q7RTM1 612 aa15.58■□□□□ 0.08
GPNMB-204ENST00000459927 TEPSINQ96N21 525 aa15.58■□□□□ 0.08
GPNMB-204ENST00000459927 SSC5DA1L4H1 1573 aa15.58■□□□□ 0.08
GPNMB-204ENST00000459927 TNFAIP1Q13829 316 aa15.57■□□□□ 0.08
GPNMB-204ENST00000459927 INTS3Q68E01 1043 aaKnown RBP15.57■□□□□ 0.08
GPNMB-204ENST00000459927 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.57■□□□□ 0.08
GPNMB-204ENST00000459927 FAM9BQ8IZU0 186 aa15.57■□□□□ 0.08
GPNMB-204ENST00000459927 MS4A4AQ96JQ5 239 aa15.57■□□□□ 0.08
GPNMB-204ENST00000459927 MRIQ9BWK5 157 aa15.57■□□□□ 0.08
GPNMB-204ENST00000459927 UTYO14607 1347 aa15.57■□□□□ 0.08
GPNMB-204ENST00000459927 TCP10L2B9ZVM9 353 aa15.56■□□□□ 0.08
GPNMB-204ENST00000459927 CRKP46108 304 aa15.56■□□□□ 0.08
GPNMB-204ENST00000459927 MAP3K9P80192 1104 aa15.56■□□□□ 0.08
GPNMB-204ENST00000459927 CRHR2Q13324 411 aa15.56■□□□□ 0.08
GPNMB-204ENST00000459927 GRIK5Q16478 980 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms