RNA–Protein interactions for RNA: ENST00000459670.2

NEDD9-205, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 614 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-205ENST00000459670 CNKSR1Q969H4 720 aa12.66□□□□□ -0.38
NEDD9-205ENST00000459670 GPR101Q96P66 508 aaPredicted RBP12.66□□□□□ -0.38
NEDD9-205ENST00000459670 BAZ2AQ9UIF9 1905 aaKnown RBP12.66□□□□□ -0.38
NEDD9-205ENST00000459670 MAST3O60307 1309 aa12.65□□□□□ -0.38
NEDD9-205ENST00000459670 HIP1O00291 1037 aa12.65□□□□□ -0.38
NEDD9-205ENST00000459670 UFL1O94874 794 aa12.65□□□□□ -0.38
NEDD9-205ENST00000459670 DPEP1P16444 411 aa12.65□□□□□ -0.38
NEDD9-205ENST00000459670 ADD2P35612 726 aa12.65□□□□□ -0.38
NEDD9-205ENST00000459670 MFAP1P55081 439 aaKnown RBP12.65□□□□□ -0.38
NEDD9-205ENST00000459670 SLFNL1Q499Z3 407 aa12.65□□□□□ -0.38
NEDD9-205ENST00000459670 KCNB2Q92953 911 aa12.65□□□□□ -0.38
NEDD9-205ENST00000459670 FSD1Q9BTV5 496 aa12.65□□□□□ -0.38
NEDD9-205ENST00000459670 GGA1Q9UJY5 639 aa12.65□□□□□ -0.38
NEDD9-205ENST00000459670 WWC3Q9ULE0 1092 aa12.65□□□□□ -0.38
NEDD9-205ENST00000459670 ATF5Q9Y2D1 282 aaPredicted RBP12.65□□□□□ -0.38
NEDD9-205ENST00000459670 HIBADHP31937 336 aaKnown RBP12.64□□□□□ -0.39
NEDD9-205ENST00000459670 GORABQ5T7V8 394 aa12.64□□□□□ -0.39
NEDD9-205ENST00000459670 CD2APQ9Y5K6 639 aa12.64□□□□□ -0.39
NEDD9-205ENST00000459670 CCDC171Q6TFL3 1326 aa12.63□□□□□ -0.39
NEDD9-205ENST00000459670 FAM205AQ6ZU69 1335 aa12.63□□□□□ -0.39
NEDD9-205ENST00000459670 RNF113AO15541 343 aaKnown RBP12.63□□□□□ -0.39
NEDD9-205ENST00000459670 IGSF3O75054 1194 aa12.63□□□□□ -0.39
NEDD9-205ENST00000459670 TTF1Q15361 905 aaPredicted RBP12.63□□□□□ -0.39
NEDD9-205ENST00000459670 UBE3CQ15386 1083 aa12.63□□□□□ -0.39
NEDD9-205ENST00000459670 CC2D2BQ6DHV5 1058 aa12.63□□□□□ -0.39
NEDD9-205ENST00000459670 OSBP2Q969R2 916 aa12.63□□□□□ -0.39
NEDD9-205ENST00000459670 SEC62Q99442 399 aaKnown RBP12.63□□□□□ -0.39
NEDD9-205ENST00000459670 C22orf23Q9BZE7 217 aa12.63□□□□□ -0.39
NEDD9-205ENST00000459670 HELLSQ9NRZ9 838 aa12.63□□□□□ -0.39
NEDD9-205ENST00000459670 ANKIB1Q9P2G1 1089 aa12.63□□□□□ -0.39
NEDD9-205ENST00000459670 DENND2AQ9ULE3 1009 aa12.63□□□□□ -0.39
NEDD9-205ENST00000459670 NSFL1CQ9UNZ2 370 aaKnown RBP12.63□□□□□ -0.39
NEDD9-205ENST00000459670 SIPA1L1O43166 1804 aa12.62□□□□□ -0.39
NEDD9-205ENST00000459670 M0R2C6 588 aa12.62□□□□□ -0.39
NEDD9-205ENST00000459670 REC8O95072 547 aa12.62□□□□□ -0.39
NEDD9-205ENST00000459670 ZFYP08048 801 aaPredicted RBP12.62□□□□□ -0.39
NEDD9-205ENST00000459670 PDE6AP16499 860 aa12.62□□□□□ -0.39
NEDD9-205ENST00000459670 POLD1P28340 1107 aa12.62□□□□□ -0.39
NEDD9-205ENST00000459670 FKBP4Q02790 459 aaKnown RBP eCLIP12.62□□□□□ -0.39
NEDD9-205ENST00000459670 PTH1RQ03431 593 aa12.62□□□□□ -0.39
NEDD9-205ENST00000459670 CAVIN4Q5BKX8 364 aa12.62□□□□□ -0.39
NEDD9-205ENST00000459670 CASC1Q6TDU7 716 aa12.62□□□□□ -0.39
NEDD9-205ENST00000459670 CWC27Q6UX04 472 aaKnown RBP12.62□□□□□ -0.39
NEDD9-205ENST00000459670 MPNDQ8N594 471 aa12.62□□□□□ -0.39
NEDD9-205ENST00000459670 TTLL6Q8N841 843 aa12.62□□□□□ -0.39
NEDD9-205ENST00000459670 APPBP2Q92624 585 aa12.62□□□□□ -0.39
NEDD9-205ENST00000459670 ZNF622Q969S3 477 aaKnown RBP eCLIP12.62□□□□□ -0.39
NEDD9-205ENST00000459670 CD209Q9NNX6 404 aa12.62□□□□□ -0.39
NEDD9-205ENST00000459670 DIAPH3Q9NSV4 1193 aa12.62□□□□□ -0.39
NEDD9-205ENST00000459670 A0A0G2JLW4 131 aa12.61□□□□□ -0.39
NEDD9-205ENST00000459670 EIF5BO60841 1220 aaKnown RBP12.61□□□□□ -0.39
NEDD9-205ENST00000459670 HSPA4P34932 840 aa12.61□□□□□ -0.39
NEDD9-205ENST00000459670 KCNJ4P48050 445 aa12.61□□□□□ -0.39
NEDD9-205ENST00000459670 ZNF804AQ7Z570 1209 aa12.61□□□□□ -0.39
NEDD9-205ENST00000459670 MAP4K1Q92918 833 aa12.61□□□□□ -0.39
NEDD9-205ENST00000459670 PSMD1Q99460 953 aa12.61□□□□□ -0.39
NEDD9-205ENST00000459670 PALD1Q9ULE6 856 aa12.61□□□□□ -0.39
NEDD9-205ENST00000459670 IQSEC3Q9UPP2 1182 aaPredicted RBP12.61□□□□□ -0.39
NEDD9-205ENST00000459670 ZMYM6O95789 1325 aa12.61□□□□□ -0.39
NEDD9-205ENST00000459670 RPAP1Q9BWH6 1393 aaPredicted RBP12.6□□□□□ -0.39
NEDD9-205ENST00000459670 KIAA2012Q0VF49 1180 aa12.6□□□□□ -0.39
NEDD9-205ENST00000459670 NECTIN1Q15223 517 aa12.6□□□□□ -0.39
NEDD9-205ENST00000459670 GRIK5Q16478 980 aa12.6□□□□□ -0.39
NEDD9-205ENST00000459670 MCMDC2Q4G0Z9 681 aa12.6□□□□□ -0.39
NEDD9-205ENST00000459670 GRIPAP1Q4V328 841 aa12.6□□□□□ -0.39
NEDD9-205ENST00000459670 TMED8Q6PL24 325 aaPredicted RBP12.6□□□□□ -0.39
NEDD9-205ENST00000459670 DPP8Q6V1X1 898 aaPredicted RBP12.6□□□□□ -0.39
NEDD9-205ENST00000459670 CCDC129Q6ZRS4 1044 aa12.6□□□□□ -0.39
NEDD9-205ENST00000459670 ADGRA1Q86SQ6 560 aa12.6□□□□□ -0.39
NEDD9-205ENST00000459670 RUFY2Q8WXA3 655 aa12.6□□□□□ -0.39
NEDD9-205ENST00000459670 PUS7LQ9H0K6 701 aaKnown RBP12.6□□□□□ -0.39
NEDD9-205ENST00000459670 GNL3LQ9NVN8 582 aaKnown RBP12.6□□□□□ -0.39
NEDD9-205ENST00000459670 MYH1P12882 1939 aa12.6□□□□□ -0.39
NEDD9-205ENST00000459670 ZNF532Q9HCE3 1301 aa12.6□□□□□ -0.39
NEDD9-205ENST00000459670 LTBP3Q9NS15 1303 aa12.6□□□□□ -0.39
NEDD9-205ENST00000459670 PRDX5P30044 214 aa12.59□□□□□ -0.39
NEDD9-205ENST00000459670 ANAPC15P60006 121 aa12.59□□□□□ -0.39
NEDD9-205ENST00000459670 NSUN4Q96CB9 384 aaKnown RBP12.59□□□□□ -0.39
NEDD9-205ENST00000459670 RIOK1Q9BRS2 568 aaKnown RBP12.59□□□□□ -0.39
NEDD9-205ENST00000459670 COA1Q9GZY4 146 aa12.59□□□□□ -0.39
NEDD9-205ENST00000459670 NFKBIEO00221 500 aa12.58□□□□□ -0.4
NEDD9-205ENST00000459670 CCDC93Q567U6 631 aa12.58□□□□□ -0.4
NEDD9-205ENST00000459670 VPS53Q5VIR6 699 aa12.58□□□□□ -0.4
NEDD9-205ENST00000459670 NLGN2Q8NFZ4 835 aa12.58□□□□□ -0.4
NEDD9-205ENST00000459670 DSCC1Q9BVC3 393 aa12.58□□□□□ -0.4
NEDD9-205ENST00000459670 ANO2Q9NQ90 1003 aa12.58□□□□□ -0.4
NEDD9-205ENST00000459670 GREB1LQ9C091 1923 aaPredicted RBP12.57□□□□□ -0.4
NEDD9-205ENST00000459670 GPAA1O43292 621 aa12.57□□□□□ -0.4
NEDD9-205ENST00000459670 C21orf2O43822 256 aa12.57□□□□□ -0.4
NEDD9-205ENST00000459670 IDH1O75874 414 aaKnown RBP12.57□□□□□ -0.4
NEDD9-205ENST00000459670 PRELPP51888 382 aa12.57□□□□□ -0.4
NEDD9-205ENST00000459670 TSGA10IPQ3SY00 556 aa12.57□□□□□ -0.4
NEDD9-205ENST00000459670 SLC9C2Q5TAH2 1124 aa12.57□□□□□ -0.4
NEDD9-205ENST00000459670 RASEFQ8IZ41 740 aa12.57□□□□□ -0.4
NEDD9-205ENST00000459670 CERS5Q8N5B7 392 aa12.57□□□□□ -0.4
NEDD9-205ENST00000459670 WDR66Q8TBY9 1149 aa12.57□□□□□ -0.4
NEDD9-205ENST00000459670 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.57□□□□□ -0.4
NEDD9-205ENST00000459670 UPF2Q9HAU5 1272 aaKnown RBP12.57□□□□□ -0.4
NEDD9-205ENST00000459670 SPON1Q9HCB6 807 aa12.57□□□□□ -0.4
NEDD9-205ENST00000459670 EPB41L4AQ9HCS5 686 aaPredicted RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms