RNA–Protein interactions for RNA: ENST00000458258.5

PTBP3-207, Transcript of polypyrimidine tract binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene PTBP3, Length 7,995 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP3-207ENST00000458258 RABEP1Q15276 862 aa6.84□□□□□ -1.32
PTBP3-207ENST00000458258 TTC39AQ5SRH9 613 aa6.84□□□□□ -1.32
PTBP3-207ENST00000458258 MAGEB6Q8N7X4 407 aa6.84□□□□□ -1.32
PTBP3-207ENST00000458258 APBA3O96018 575 aa6.83□□□□□ -1.32
PTBP3-207ENST00000458258 FAM47AQ5JRC9 791 aa6.83□□□□□ -1.32
PTBP3-207ENST00000458258 ZFPM1Q8IX07 1006 aa6.83□□□□□ -1.32
PTBP3-207ENST00000458258 HPS5Q9UPZ3 1129 aa6.83□□□□□ -1.32
PTBP3-207ENST00000458258 ADAMTS7Q9UKP4 1686 aa6.83□□□□□ -1.32
PTBP3-207ENST00000458258 GTF2E1P29083 439 aaPredicted RBP6.83□□□□□ -1.32
PTBP3-207ENST00000458258 CAVIN1Q6NZI2 390 aaKnown RBP6.83□□□□□ -1.32
PTBP3-207ENST00000458258 PHKBQ93100 1093 aa6.83□□□□□ -1.32
PTBP3-207ENST00000458258 RBSNQ9H1K0 784 aa6.83□□□□□ -1.32
PTBP3-207ENST00000458258 POLLQ9UGP5 575 aa6.83□□□□□ -1.32
PTBP3-207ENST00000458258 GSG1L2A8MUP6 293 aa6.83□□□□□ -1.32
PTBP3-207ENST00000458258 RNF113AO15541 343 aaKnown RBP6.83□□□□□ -1.32
PTBP3-207ENST00000458258 EARS2Q5JPH6 523 aaKnown RBP6.83□□□□□ -1.32
PTBP3-207ENST00000458258 FZD1Q9UP38 647 aa6.83□□□□□ -1.32
PTBP3-207ENST00000458258 CENPFP49454 3210 aa6.83□□□□□ -1.32
PTBP3-207ENST00000458258 KRT27Q7Z3Y8 459 aa6.83□□□□□ -1.32
PTBP3-207ENST00000458258 KDM3BQ7LBC6 1761 aa6.83□□□□□ -1.32
PTBP3-207ENST00000458258 ONECUT3O60422 494 aaPredicted RBP6.83□□□□□ -1.32
PTBP3-207ENST00000458258 NBPF5PQ86XG9 351 aaPredicted RBP6.83□□□□□ -1.32
PTBP3-207ENST00000458258 FAM217BQ9NTX9 383 aaPredicted RBP6.83□□□□□ -1.32
PTBP3-207ENST00000458258 GPSM2P81274 684 aa6.83□□□□□ -1.32
PTBP3-207ENST00000458258 GRIN1Q05586 938 aa6.83□□□□□ -1.32
PTBP3-207ENST00000458258 RRP12Q5JTH9 1297 aaKnown RBP6.83□□□□□ -1.32
PTBP3-207ENST00000458258 CCDC84Q86UT8 332 aaPredicted RBP6.83□□□□□ -1.32
PTBP3-207ENST00000458258 CERS5Q8N5B7 392 aa6.83□□□□□ -1.32
PTBP3-207ENST00000458258 USP54Q70EL1 1684 aa6.82□□□□□ -1.32
PTBP3-207ENST00000458258 EGFRP00533 1210 aa6.82□□□□□ -1.32
PTBP3-207ENST00000458258 JAG1P78504 1218 aa6.82□□□□□ -1.32
PTBP3-207ENST00000458258 STRBPQ96SI9 672 aaKnown RBP6.82□□□□□ -1.32
PTBP3-207ENST00000458258 NARFQ9UHQ1 456 aa6.82□□□□□ -1.32
PTBP3-207ENST00000458258 RANBP6O60518 1105 aaKnown RBP6.82□□□□□ -1.32
PTBP3-207ENST00000458258 REC8O95072 547 aa6.82□□□□□ -1.32
PTBP3-207ENST00000458258 LIG1P18858 919 aa6.82□□□□□ -1.32
PTBP3-207ENST00000458258 RRAGDQ9NQL2 400 aaPredicted RBP6.82□□□□□ -1.32
PTBP3-207ENST00000458258 SLC30A10Q6XR72 485 aa6.82□□□□□ -1.32
PTBP3-207ENST00000458258 USP48Q86UV5 1035 aa6.82□□□□□ -1.32
PTBP3-207ENST00000458258 SPATA5Q8NB90 893 aa6.82□□□□□ -1.32
PTBP3-207ENST00000458258 KCNB2Q92953 911 aa6.82□□□□□ -1.32
PTBP3-207ENST00000458258 FBXW7Q969H0 707 aa6.82□□□□□ -1.32
PTBP3-207ENST00000458258 SERPINB2P05120 415 aa6.82□□□□□ -1.32
PTBP3-207ENST00000458258 USP17L8P0C7I0 530 aa6.82□□□□□ -1.32
PTBP3-207ENST00000458258 MCMDC2Q4G0Z9 681 aa6.82□□□□□ -1.32
PTBP3-207ENST00000458258 ADD2P35612 726 aa6.81□□□□□ -1.32
PTBP3-207ENST00000458258 MPHOSPH8Q99549 860 aa6.81□□□□□ -1.32
PTBP3-207ENST00000458258 RPS8P62241 208 aaKnown RBP6.81□□□□□ -1.32
PTBP3-207ENST00000458258 SPECC1Q5M775 1068 aa6.81□□□□□ -1.32
PTBP3-207ENST00000458258 PLA2G12BQ9BX93 195 aa6.81□□□□□ -1.32
PTBP3-207ENST00000458258 IRS2Q9Y4H2 1338 aa6.81□□□□□ -1.32
PTBP3-207ENST00000458258 CDHR2Q9BYE9 1310 aa6.81□□□□□ -1.32
PTBP3-207ENST00000458258 POLRMTO00411 1230 aaKnown RBP6.81□□□□□ -1.32
PTBP3-207ENST00000458258 APPP05067 770 aa6.81□□□□□ -1.32
PTBP3-207ENST00000458258 RPS6KB1P23443 525 aa6.81□□□□□ -1.32
PTBP3-207ENST00000458258 EXOSC10Q01780 885 aaKnown RBP6.81□□□□□ -1.32
PTBP3-207ENST00000458258 AHDC1Q5TGY3 1603 aaPredicted RBP6.81□□□□□ -1.32
PTBP3-207ENST00000458258 SCNN1DP51172 638 aa6.81□□□□□ -1.32
PTBP3-207ENST00000458258 NEK1Q96PY6 1258 aa6.81□□□□□ -1.32
PTBP3-207ENST00000458258 PSDA5PKW4 1024 aaPredicted RBP6.8□□□□□ -1.32
PTBP3-207ENST00000458258 CAMK4Q16566 473 aa6.8□□□□□ -1.32
PTBP3-207ENST00000458258 HSP90AB4PQ58FF6 505 aa6.8□□□□□ -1.32
PTBP3-207ENST00000458258 MB21D2Q8IYB1 491 aaPredicted RBP6.8□□□□□ -1.32
PTBP3-207ENST00000458258 PGBD1Q96JS3 809 aa6.8□□□□□ -1.32
PTBP3-207ENST00000458258 CHMP4BQ9H444 224 aaKnown RBP6.8□□□□□ -1.32
PTBP3-207ENST00000458258 ZSWIM5Q9P217 1185 aa6.8□□□□□ -1.32
PTBP3-207ENST00000458258 BECN1Q14457 450 aa6.8□□□□□ -1.32
PTBP3-207ENST00000458258 OXER1Q8TDS5 423 aa6.8□□□□□ -1.32
PTBP3-207ENST00000458258 RIOK1Q9BRS2 568 aaKnown RBP6.8□□□□□ -1.32
PTBP3-207ENST00000458258 AATFQ9NY61 560 aaKnown RBP eCLIP6.8□□□□□ -1.323e-8■□□□□ 10.6
PTBP3-207ENST00000458258 CEP350Q5VT06 3117 aa6.8□□□□□ -1.32
PTBP3-207ENST00000458258 MINDY4BA8MYZ0 360 aa6.8□□□□□ -1.32
PTBP3-207ENST00000458258 ERVV-1B6SEH8 477 aa6.8□□□□□ -1.32
PTBP3-207ENST00000458258 C17orf53Q8N3J3 647 aaPredicted RBP6.8□□□□□ -1.32
PTBP3-207ENST00000458258 NSUN7Q8NE18 718 aaKnown RBP6.8□□□□□ -1.32
PTBP3-207ENST00000458258 SAP30BPQ9UHR5 308 aaKnown RBP6.8□□□□□ -1.32
PTBP3-207ENST00000458258 TOMM22Q9NS69 142 aa6.8□□□□□ -1.32
PTBP3-207ENST00000458258 RTCBQ9Y3I0 505 aaKnown RBP6.8□□□□□ -1.32
PTBP3-207ENST00000458258 SYCE3A1L190 88 aa6.8□□□□□ -1.32
PTBP3-207ENST00000458258 PDIA3P30101 505 aaKnown RBP6.8□□□□□ -1.32
PTBP3-207ENST00000458258 PLCD1P51178 756 aa6.8□□□□□ -1.32
PTBP3-207ENST00000458258 USP49Q70CQ1 688 aa6.8□□□□□ -1.32
PTBP3-207ENST00000458258 DBNDD1Q9H9R9 158 aa6.8□□□□□ -1.32
PTBP3-207ENST00000458258 RFC4P35249 363 aa6.8□□□□□ -1.32
PTBP3-207ENST00000458258 KCNJ14Q9UNX9 436 aa6.8□□□□□ -1.32
PTBP3-207ENST00000458258 DDX49Q9Y6V7 483 aaKnown RBP6.8□□□□□ -1.32
PTBP3-207ENST00000458258 SHANK3Q9BYB0 1731 aa6.8□□□□□ -1.32
PTBP3-207ENST00000458258 POLR3DP05423 398 aaPredicted RBP6.79□□□□□ -1.32
PTBP3-207ENST00000458258 PRELPP51888 382 aa6.79□□□□□ -1.32
PTBP3-207ENST00000458258 RAI14Q9P0K7 980 aa6.79□□□□□ -1.32
PTBP3-207ENST00000458258 ATF5Q9Y2D1 282 aaPredicted RBP6.79□□□□□ -1.32
PTBP3-207ENST00000458258 NHSL1Q5SYE7 1610 aa6.79□□□□□ -1.32
PTBP3-207ENST00000458258 FOXN1O15353 648 aa6.79□□□□□ -1.32
PTBP3-207ENST00000458258 MMP10P09238 476 aa6.79□□□□□ -1.32
PTBP3-207ENST00000458258 GIMAP6Q6P9H5 292 aa6.79□□□□□ -1.32
PTBP3-207ENST00000458258 BLOC1S2Q6QNY1 142 aa6.79□□□□□ -1.32
PTBP3-207ENST00000458258 AK7Q96M32 723 aa6.79□□□□□ -1.32
PTBP3-207ENST00000458258 TRPC5Q9UL62 973 aaPredicted RBP6.79□□□□□ -1.32
PTBP3-207ENST00000458258 LIMCH1Q9UPQ0 1083 aa6.79□□□□□ -1.32
PTBP3-207ENST00000458258 BRCA2P51587 3418 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms