RNA–Protein interactions for RNA: ENST00000458085.6

CAPN13-203, Transcript of calpain 13, humanhuman

TSL 5

Gene CAPN13, Length 2,269 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN13-203ENST00000458085 SMC3Q9UQE7 1217 aa19.48■□□□□ 0.71
CAPN13-203ENST00000458085 UBR3Q6ZT12 1888 aa19.47■□□□□ 0.71
CAPN13-203ENST00000458085 TNRC6CQ9HCJ0 1690 aaKnown RBP19.47■□□□□ 0.71
CAPN13-203ENST00000458085 E7EWF7 191 aa19.47■□□□□ 0.71
CAPN13-203ENST00000458085 FGAP02671 866 aa19.47■□□□□ 0.71
CAPN13-203ENST00000458085 Q6ZUG5 572 aa19.47■□□□□ 0.71
CAPN13-203ENST00000458085 HAND2P61296 217 aa19.46■□□□□ 0.71
CAPN13-203ENST00000458085 DOCK2Q92608 1830 aa19.46■□□□□ 0.71
CAPN13-203ENST00000458085 GJB2P29033 226 aa19.46■□□□□ 0.71
CAPN13-203ENST00000458085 GYG1P46976 350 aa19.46■□□□□ 0.71
CAPN13-203ENST00000458085 ANKRD1Q15327 319 aa19.46■□□□□ 0.71
CAPN13-203ENST00000458085 UBE3CQ15386 1083 aa19.46■□□□□ 0.71
CAPN13-203ENST00000458085 ZSCAN25Q6NSZ9 544 aa19.46■□□□□ 0.71
CAPN13-203ENST00000458085 GOLGA6L22H0YM25 854 aa19.45■□□□□ 0.7
CAPN13-203ENST00000458085 TM4SF1P30408 202 aa19.45■□□□□ 0.7
CAPN13-203ENST00000458085 STK3Q13188 491 aa19.45■□□□□ 0.7
CAPN13-203ENST00000458085 SLC51AQ86UW1 340 aa19.45■□□□□ 0.7
CAPN13-203ENST00000458085 LMBRD1Q9NUN5 540 aa19.45■□□□□ 0.7
CAPN13-203ENST00000458085 SYT1P21579 422 aa19.45■□□□□ 0.7
CAPN13-203ENST00000458085 RPS8P62241 208 aaKnown RBP19.45■□□□□ 0.7
CAPN13-203ENST00000458085 FOXD4L6Q3SYB3 417 aaPredicted RBP19.44■□□□□ 0.7
CAPN13-203ENST00000458085 FOXD4L3Q6VB84 417 aaPredicted RBP19.44■□□□□ 0.7
CAPN13-203ENST00000458085 KLRK1P26718 216 aa19.44■□□□□ 0.7
CAPN13-203ENST00000458085 EXOSC10Q01780 885 aaKnown RBP19.44■□□□□ 0.7
CAPN13-203ENST00000458085 DHX32Q7L7V1 743 aaKnown RBP19.44■□□□□ 0.7
CAPN13-203ENST00000458085 CHST3Q7LGC8 479 aa19.44■□□□□ 0.7
CAPN13-203ENST00000458085 PROM2Q8N271 834 aa19.44■□□□□ 0.7
CAPN13-203ENST00000458085 MAGEB6Q8N7X4 407 aa19.44■□□□□ 0.7
CAPN13-203ENST00000458085 ZNF804BA4D1E1 1349 aa19.43■□□□□ 0.7
CAPN13-203ENST00000458085 UBE4AQ14139 1066 aa19.43■□□□□ 0.7
CAPN13-203ENST00000458085 BRF1Q92994 677 aa19.43■□□□□ 0.7
CAPN13-203ENST00000458085 COL1A1P02452 1464 aaPredicted RBP19.43■□□□□ 0.7
CAPN13-203ENST00000458085 CARMIL3Q8ND23 1372 aa19.43■□□□□ 0.7
CAPN13-203ENST00000458085 WDR33Q9C0J8 1336 aaKnown RBP19.43■□□□□ 0.7
CAPN13-203ENST00000458085 NPHP1O15259 732 aa19.42■□□□□ 0.7
CAPN13-203ENST00000458085 STX6O43752 255 aa19.42■□□□□ 0.7
CAPN13-203ENST00000458085 PRPF40AO75400 957 aaKnown RBP19.42■□□□□ 0.7
CAPN13-203ENST00000458085 GYS1P13807 737 aa19.42■□□□□ 0.7
CAPN13-203ENST00000458085 CTNNA3Q9UI47 895 aa19.42■□□□□ 0.7
CAPN13-203ENST00000458085 TCHHQ07283 1943 aa19.41■□□□□ 0.7
CAPN13-203ENST00000458085 ADRA2BP18089 450 aa19.41■□□□□ 0.7
CAPN13-203ENST00000458085 SLC27A3Q5K4L6 730 aa19.41■□□□□ 0.7
CAPN13-203ENST00000458085 HMGB1P09429 215 aaKnown RBP19.41■□□□□ 0.7
CAPN13-203ENST00000458085 PTMSP20962 102 aa19.41■□□□□ 0.7
CAPN13-203ENST00000458085 MAP3K12Q12852 859 aa19.41■□□□□ 0.7
CAPN13-203ENST00000458085 IMMTQ16891 758 aaKnown RBP19.41■□□□□ 0.7
CAPN13-203ENST00000458085 FAM84BQ96KN1 310 aaPredicted RBP19.41■□□□□ 0.7
CAPN13-203ENST00000458085 STRBPQ96SI9 672 aaKnown RBP19.41■□□□□ 0.7
CAPN13-203ENST00000458085 NBPF3Q9H094 633 aa19.41■□□□□ 0.7
CAPN13-203ENST00000458085 ZSCAN22P10073 491 aaPredicted RBP19.4■□□□□ 0.7
CAPN13-203ENST00000458085 SKOR2Q2VWA4 1001 aaPredicted RBP19.4■□□□□ 0.7
CAPN13-203ENST00000458085 PRR5LQ6MZQ0 368 aa19.4■□□□□ 0.7
CAPN13-203ENST00000458085 CNBD1Q8NA66 436 aa19.4■□□□□ 0.7
CAPN13-203ENST00000458085 NKX2-3Q8TAU0 364 aa19.4■□□□□ 0.7
CAPN13-203ENST00000458085 GTF3C6Q969F1 213 aa19.4■□□□□ 0.7
CAPN13-203ENST00000458085 DENND2AQ9ULE3 1009 aa19.4■□□□□ 0.7
CAPN13-203ENST00000458085 DDX49Q9Y6V7 483 aaKnown RBP19.4■□□□□ 0.7
CAPN13-203ENST00000458085 APOBRQ0VD83 1088 aa19.39■□□□□ 0.69
CAPN13-203ENST00000458085 TXNRD1Q16881 649 aa19.39■□□□□ 0.69
CAPN13-203ENST00000458085 AIDAQ96BJ3 306 aa19.39■□□□□ 0.69
CAPN13-203ENST00000458085 AGXT2Q9BYV1 514 aa19.39■□□□□ 0.69
CAPN13-203ENST00000458085 GPHNQ9NQX3 736 aaPredicted RBP19.39■□□□□ 0.69
CAPN13-203ENST00000458085 MTMR6Q9Y217 621 aa19.39■□□□□ 0.69
CAPN13-203ENST00000458085 MBD4O95243 580 aa19.39■□□□□ 0.69
CAPN13-203ENST00000458085 FGD1P98174 961 aa19.39■□□□□ 0.69
CAPN13-203ENST00000458085 ARMT1Q9H993 441 aa19.39■□□□□ 0.69
CAPN13-203ENST00000458085 JAK2O60674 1132 aa19.38■□□□□ 0.69
CAPN13-203ENST00000458085 APPP05067 770 aa19.38■□□□□ 0.69
CAPN13-203ENST00000458085 RBM6P78332 1123 aaKnown RBP19.38■□□□□ 0.69
CAPN13-203ENST00000458085 KLHL40Q2TBA0 621 aa19.38■□□□□ 0.69
CAPN13-203ENST00000458085 GDPD2Q9HCC8 539 aa19.38■□□□□ 0.69
CAPN13-203ENST00000458085 EPB41L4AQ9HCS5 686 aaPredicted RBP19.38■□□□□ 0.69
CAPN13-203ENST00000458085 ZNF213O14771 459 aa19.37■□□□□ 0.69
CAPN13-203ENST00000458085 SCRN1Q12765 414 aa19.37■□□□□ 0.69
CAPN13-203ENST00000458085 GPT2Q8TD30 523 aa19.37■□□□□ 0.69
CAPN13-203ENST00000458085 TFCP2L1Q9NZI6 479 aa19.37■□□□□ 0.69
CAPN13-203ENST00000458085 LRP2BPQ9P2M1 347 aa19.37■□□□□ 0.69
CAPN13-203ENST00000458085 ABCF2Q9UG63 623 aa19.37■□□□□ 0.69
CAPN13-203ENST00000458085 F13A1P00488 732 aa19.37■□□□□ 0.69
CAPN13-203ENST00000458085 CAVIN4Q5BKX8 364 aa19.37■□□□□ 0.69
CAPN13-203ENST00000458085 ADGRA1Q86SQ6 560 aa19.37■□□□□ 0.69
CAPN13-203ENST00000458085 TBC1D10CQ8IV04 446 aa19.37■□□□□ 0.69
CAPN13-203ENST00000458085 MB21D2Q8IYB1 491 aaPredicted RBP19.37■□□□□ 0.69
CAPN13-203ENST00000458085 PRKAB2O43741 272 aa19.36■□□□□ 0.69
CAPN13-203ENST00000458085 FBXO33Q7Z6M2 555 aa19.36■□□□□ 0.69
CAPN13-203ENST00000458085 TXNRD3Q86VQ6 643 aa19.36■□□□□ 0.69
CAPN13-203ENST00000458085 VPS37DQ86XT2 251 aa19.36■□□□□ 0.69
CAPN13-203ENST00000458085 LCORLQ8N3X6 602 aa19.36■□□□□ 0.69
CAPN13-203ENST00000458085 NSFL1CQ9UNZ2 370 aaKnown RBP19.36■□□□□ 0.69
CAPN13-203ENST00000458085 ANTXR2P58335 489 aa19.36■□□□□ 0.69
CAPN13-203ENST00000458085 MIGA1Q8NAN2 632 aa19.36■□□□□ 0.69
CAPN13-203ENST00000458085 GNL3LQ9NVN8 582 aaKnown RBP19.36■□□□□ 0.69
CAPN13-203ENST00000458085 SERPINB2P05120 415 aa19.35■□□□□ 0.69
CAPN13-203ENST00000458085 LARP1BQ659C4 914 aaKnown RBP19.35■□□□□ 0.69
CAPN13-203ENST00000458085 VPS37CA5D8V6 355 aaPredicted RBP19.35■□□□□ 0.69
CAPN13-203ENST00000458085 PFKFB2O60825 505 aa19.35■□□□□ 0.69
CAPN13-203ENST00000458085 DDR1Q08345 913 aa19.35■□□□□ 0.69
CAPN13-203ENST00000458085 ZNF772Q68DY9 489 aaPredicted RBP19.35■□□□□ 0.69
CAPN13-203ENST00000458085 ANKRD2Q9GZV1 360 aa19.35■□□□□ 0.69
CAPN13-203ENST00000458085 GSG1L2A8MUP6 293 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms