RNA–Protein interactions for RNA: ENST00000457745.1

RIF1-208, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-208ENST00000457745 FAM84BQ96KN1 310 aaPredicted RBP10.63□□□□□ -0.71
RIF1-208ENST00000457745 USP26Q9BXU7 913 aa10.63□□□□□ -0.71
RIF1-208ENST00000457745 LSG1Q9H089 658 aaKnown RBP10.63□□□□□ -0.71
RIF1-208ENST00000457745 AKAP2Q9Y2D5 859 aa10.63□□□□□ -0.71
RIF1-208ENST00000457745 TAF6LQ9Y6J9 622 aa10.63□□□□□ -0.71
RIF1-208ENST00000457745 M0R2C6 588 aa10.62□□□□□ -0.71
RIF1-208ENST00000457745 FOXP2O15409 715 aa10.62□□□□□ -0.71
RIF1-208ENST00000457745 CD2BP2O95400 341 aaKnown RBP10.62□□□□□ -0.71
RIF1-208ENST00000457745 SLC5A1P13866 664 aa10.62□□□□□ -0.71
RIF1-208ENST00000457745 GRIK5Q16478 980 aa10.62□□□□□ -0.71
RIF1-208ENST00000457745 CWC27Q6UX04 472 aaKnown RBP10.62□□□□□ -0.71
RIF1-208ENST00000457745 C2CD5Q86YS7 1000 aa10.62□□□□□ -0.71
RIF1-208ENST00000457745 ZNF384Q8TF68 577 aa10.62□□□□□ -0.71
RIF1-208ENST00000457745 CRAMP1Q96RY5 1269 aa10.62□□□□□ -0.71
RIF1-208ENST00000457745 SGIP1Q9BQI5 828 aa10.62□□□□□ -0.71
RIF1-208ENST00000457745 FSD1Q9BTV5 496 aa10.62□□□□□ -0.71
RIF1-208ENST00000457745 C22orf23Q9BZE7 217 aa10.62□□□□□ -0.71
RIF1-208ENST00000457745 PAG1Q9NWQ8 432 aa10.62□□□□□ -0.71
RIF1-208ENST00000457745 WWC3Q9ULE0 1092 aa10.62□□□□□ -0.71
RIF1-208ENST00000457745 JAG2Q9Y219 1238 aa10.62□□□□□ -0.71
RIF1-208ENST00000457745 BRCA1P38398 1863 aaKnown RBP10.61□□□□□ -0.71
RIF1-208ENST00000457745 COL4A5P29400 1685 aa10.61□□□□□ -0.71
RIF1-208ENST00000457745 PPEF1O14829 653 aaPredicted RBP10.61□□□□□ -0.71
RIF1-208ENST00000457745 HSP90B1P14625 803 aaKnown RBP10.61□□□□□ -0.71
RIF1-208ENST00000457745 KCNA3P22001 575 aa10.61□□□□□ -0.71
RIF1-208ENST00000457745 SLC4A3P48751 1232 aa10.61□□□□□ -0.71
RIF1-208ENST00000457745 FKBP4Q02790 459 aaKnown RBP eCLIP10.61□□□□□ -0.71
RIF1-208ENST00000457745 POTEGQ6S5H5 508 aa10.61□□□□□ -0.71
RIF1-208ENST00000457745 FBXO33Q7Z6M2 555 aa10.61□□□□□ -0.71
RIF1-208ENST00000457745 CCDC125Q86Z20 511 aa10.61□□□□□ -0.71
RIF1-208ENST00000457745 KBTBD3Q8NAB2 608 aa10.61□□□□□ -0.71
RIF1-208ENST00000457745 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.61□□□□□ -0.71
RIF1-208ENST00000457745 RBM17Q96I25 401 aaKnown RBP10.61□□□□□ -0.71
RIF1-208ENST00000457745 POLLQ9UGP5 575 aa10.61□□□□□ -0.71
RIF1-208ENST00000457745 ADAMTSL1Q8N6G6 1762 aa10.61□□□□□ -0.71
RIF1-208ENST00000457745 RBM25P49756 843 aaKnown RBP10.6□□□□□ -0.71
RIF1-208ENST00000457745 UBE4AQ14139 1066 aa10.6□□□□□ -0.71
RIF1-208ENST00000457745 MS4A3Q96HJ5 214 aa10.6□□□□□ -0.71
RIF1-208ENST00000457745 ZNF512BQ96KM6 892 aaPredicted RBP10.6□□□□□ -0.71
RIF1-208ENST00000457745 PCDHB13Q9Y5F0 798 aa10.6□□□□□ -0.71
RIF1-208ENST00000457745 MAST3O60307 1309 aa10.59□□□□□ -0.71
RIF1-208ENST00000457745 SCN9AQ15858 1988 aa10.59□□□□□ -0.71
RIF1-208ENST00000457745 NPR1P16066 1061 aa10.59□□□□□ -0.71
RIF1-208ENST00000457745 DPEP1P16444 411 aa10.59□□□□□ -0.71
RIF1-208ENST00000457745 PTGER2P43116 358 aa10.59□□□□□ -0.71
RIF1-208ENST00000457745 CCDC158Q5M9N0 1113 aa10.59□□□□□ -0.71
RIF1-208ENST00000457745 ZMYM1Q5SVZ6 1142 aa10.59□□□□□ -0.71
RIF1-208ENST00000457745 GORABQ5T7V8 394 aa10.59□□□□□ -0.71
RIF1-208ENST00000457745 VPS53Q5VIR6 699 aa10.59□□□□□ -0.71
RIF1-208ENST00000457745 ADGRA1Q86SQ6 560 aa10.59□□□□□ -0.71
RIF1-208ENST00000457745 SPATA5Q8NB90 893 aa10.59□□□□□ -0.71
RIF1-208ENST00000457745 TBC1D16Q8TBP0 767 aa10.59□□□□□ -0.71
RIF1-208ENST00000457745 C7orf43Q8WVR3 580 aa10.59□□□□□ -0.71
RIF1-208ENST00000457745 OSBP2Q969R2 916 aa10.59□□□□□ -0.71
RIF1-208ENST00000457745 RFX7Q2KHR2 1363 aa10.59□□□□□ -0.71
RIF1-208ENST00000457745 MAST2Q6P0Q8 1798 aa10.58□□□□□ -0.72
RIF1-208ENST00000457745 TCRBV5S4A2TA0A5A2 114 aa10.58□□□□□ -0.72
RIF1-208ENST00000457745 UFL1O94874 794 aa10.58□□□□□ -0.72
RIF1-208ENST00000457745 PRPF40BQ6NWY9 871 aaKnown RBP10.58□□□□□ -0.72
RIF1-208ENST00000457745 NKX2-3Q8TAU0 364 aa10.58□□□□□ -0.72
RIF1-208ENST00000457745 ZNF622Q969S3 477 aaKnown RBP eCLIP10.58□□□□□ -0.72
RIF1-208ENST00000457745 MASTLQ96GX5 879 aa10.58□□□□□ -0.72
RIF1-208ENST00000457745 ANO2Q9NQ90 1003 aa10.58□□□□□ -0.72
RIF1-208ENST00000457745 DIAPH3Q9NSV4 1193 aa10.58□□□□□ -0.72
RIF1-208ENST00000457745 ATP6V0A2Q9Y487 856 aa10.58□□□□□ -0.72
RIF1-208ENST00000457745 XDHP47989 1333 aa10.58□□□□□ -0.72
RIF1-208ENST00000457745 RAD50Q92878 1312 aa10.58□□□□□ -0.72
RIF1-208ENST00000457745 LAMA4Q16363 1823 aa10.57□□□□□ -0.72
RIF1-208ENST00000457745 RNF113AO15541 343 aaKnown RBP10.57□□□□□ -0.72
RIF1-208ENST00000457745 PDE6AP16499 860 aa10.57□□□□□ -0.72
RIF1-208ENST00000457745 ADD2P35612 726 aa10.57□□□□□ -0.72
RIF1-208ENST00000457745 PDE6BP35913 854 aa10.57□□□□□ -0.72
RIF1-208ENST00000457745 SP8Q8IXZ3 490 aa10.57□□□□□ -0.72
RIF1-208ENST00000457745 ANKRD2Q9GZV1 360 aa10.57□□□□□ -0.72
RIF1-208ENST00000457745 PUS7LQ9H0K6 701 aaKnown RBP10.57□□□□□ -0.72
RIF1-208ENST00000457745 NSFL1CQ9UNZ2 370 aaKnown RBP10.57□□□□□ -0.72
RIF1-208ENST00000457745 CCDC171Q6TFL3 1326 aa10.57□□□□□ -0.72
RIF1-208ENST00000457745 SMIM22K7EJ46 135 aa10.56□□□□□ -0.72
RIF1-208ENST00000457745 BBOX1O75936 387 aa10.56□□□□□ -0.72
RIF1-208ENST00000457745 UQCRFS1P1P0C7P4 283 aa10.56□□□□□ -0.72
RIF1-208ENST00000457745 CPA1P15085 419 aa10.56□□□□□ -0.72
RIF1-208ENST00000457745 HMGB2P26583 209 aaKnown RBP10.56□□□□□ -0.72
RIF1-208ENST00000457745 CHAF1AQ13111 956 aaPredicted RBP10.56□□□□□ -0.72
RIF1-208ENST00000457745 STYK1Q6J9G0 422 aa10.56□□□□□ -0.72
RIF1-208ENST00000457745 SLC16A10Q8TF71 515 aa10.56□□□□□ -0.72
RIF1-208ENST00000457745 PODXL2Q9NZ53 605 aa10.56□□□□□ -0.72
RIF1-208ENST00000457745 ANKIB1Q9P2G1 1089 aa10.56□□□□□ -0.72
RIF1-208ENST00000457745 RIMBP2O15034 1052 aa10.55□□□□□ -0.72
RIF1-208ENST00000457745 CHRM1P11229 460 aaPredicted RBP10.55□□□□□ -0.72
RIF1-208ENST00000457745 HSPA4P34932 840 aa10.55□□□□□ -0.72
RIF1-208ENST00000457745 KCNJ4P48050 445 aa10.55□□□□□ -0.72
RIF1-208ENST00000457745 TTLL5Q6EMB2 1281 aa10.55□□□□□ -0.72
RIF1-208ENST00000457745 C15orf52Q6ZUT6 534 aaKnown RBP10.55□□□□□ -0.72
RIF1-208ENST00000457745 TDRD7Q8NHU6 1098 aaKnown RBP10.55□□□□□ -0.72
RIF1-208ENST00000457745 MXD3Q9BW11 206 aa10.55□□□□□ -0.72
RIF1-208ENST00000457745 MTFR1LQ9H019 292 aa10.55□□□□□ -0.72
RIF1-208ENST00000457745 KCNQ5Q9NR82 932 aa10.55□□□□□ -0.72
RIF1-208ENST00000457745 LEMD3Q9Y2U8 911 aa10.55□□□□□ -0.72
RIF1-208ENST00000457745 RBM8AQ9Y5S9 174 aaKnown RBP10.55□□□□□ -0.72
RIF1-208ENST00000457745 TACC3Q9Y6A5 838 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms