RNA–Protein interactions for RNA: ENST00000456953.5

SNHG17-208, Transcript of small nucleolar RNA host gene 17, humanhuman

TSL 3 BASIC

Gene SNHG17, Length 546 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG17-208ENST00000456953 GJA5P36382 358 aa16.94■□□□□ 0.3
SNHG17-208ENST00000456953 SLC9C1Q4G0N8 1177 aa16.94■□□□□ 0.3
SNHG17-208ENST00000456953 PTPN18Q99952 460 aa16.94■□□□□ 0.3
SNHG17-208ENST00000456953 MAP3K2Q9Y2U5 619 aa16.94■□□□□ 0.3
SNHG17-208ENST00000456953 ELL2O00472 640 aaPredicted RBP16.93■□□□□ 0.3
SNHG17-208ENST00000456953 IGKV5-2P06315 115 aa16.93■□□□□ 0.3
SNHG17-208ENST00000456953 CAP1Q01518 475 aa16.93■□□□□ 0.3
SNHG17-208ENST00000456953 ANKRD13AQ8IZ07 590 aa16.93■□□□□ 0.3
SNHG17-208ENST00000456953 IFT57Q9NWB7 429 aa16.93■□□□□ 0.3
SNHG17-208ENST00000456953 SPDYE2BA6NHP3 402 aa16.92■□□□□ 0.3
SNHG17-208ENST00000456953 SPDYE6P0CI01 402 aa16.92■□□□□ 0.3
SNHG17-208ENST00000456953 KCNJ4P48050 445 aa16.92■□□□□ 0.3
SNHG17-208ENST00000456953 NEXNQ0ZGT2 675 aa16.92■□□□□ 0.3
SNHG17-208ENST00000456953 WDR43Q15061 677 aaKnown RBP eCLIP16.92■□□□□ 0.3
SNHG17-208ENST00000456953 NBPF12Q5TAG4 269 aaPredicted RBP16.92■□□□□ 0.3
SNHG17-208ENST00000456953 CCDC30Q5VVM6 783 aa16.92■□□□□ 0.3
SNHG17-208ENST00000456953 KSR2Q6VAB6 950 aa16.92■□□□□ 0.3
SNHG17-208ENST00000456953 CERS5Q8N5B7 392 aa16.92■□□□□ 0.3
SNHG17-208ENST00000456953 CD209Q9NNX6 404 aa16.92■□□□□ 0.3
SNHG17-208ENST00000456953 CLRN2A0PK11 232 aa16.91■□□□□ 0.3
SNHG17-208ENST00000456953 H0YGN5 161 aa16.91■□□□□ 0.3
SNHG17-208ENST00000456953 USP2O75604 605 aaPredicted RBP16.91■□□□□ 0.3
SNHG17-208ENST00000456953 SLC4A8Q2Y0W8 1093 aa16.91■□□□□ 0.3
SNHG17-208ENST00000456953 CFAP100Q494V2 611 aa16.91■□□□□ 0.3
SNHG17-208ENST00000456953 MPHOSPH8Q99549 860 aa16.91■□□□□ 0.3
SNHG17-208ENST00000456953 PTCH2Q9Y6C5 1203 aa16.91■□□□□ 0.3
SNHG17-208ENST00000456953 PI4KAP2A4QPH2 592 aa16.9■□□□□ 0.3
SNHG17-208ENST00000456953 ITGA6P23229 1130 aa16.9■□□□□ 0.3
SNHG17-208ENST00000456953 GNAI1P63096 354 aa16.9■□□□□ 0.3
SNHG17-208ENST00000456953 CALD1Q05682 793 aaKnown RBP16.9■□□□□ 0.3
SNHG17-208ENST00000456953 PI4KAP1Q8N8J0 262 aa16.9■□□□□ 0.3
SNHG17-208ENST00000456953 OPTNQ96CV9 577 aa16.9■□□□□ 0.3
SNHG17-208ENST00000456953 OTUD5Q96G74 571 aa16.9■□□□□ 0.3
SNHG17-208ENST00000456953 PRMT6Q96LA8 375 aaPredicted RBP16.9■□□□□ 0.3
SNHG17-208ENST00000456953 VEZTQ9HBM0 779 aa16.9■□□□□ 0.3
SNHG17-208ENST00000456953 PCDHAC2Q9Y5I4 1007 aa16.9■□□□□ 0.3
SNHG17-208ENST00000456953 COL6A3P12111 3177 aa16.89■□□□□ 0.29
SNHG17-208ENST00000456953 FKBP1AP62942 108 aaKnown RBP16.89■□□□□ 0.29
SNHG17-208ENST00000456953 RASA3Q14644 834 aa16.89■□□□□ 0.29
SNHG17-208ENST00000456953 UBE3BQ7Z3V4 1068 aa16.89■□□□□ 0.29
SNHG17-208ENST00000456953 C8orf58Q8NAV2 365 aa16.89■□□□□ 0.29
SNHG17-208ENST00000456953 MS4A4AQ96JQ5 239 aa16.89■□□□□ 0.29
SNHG17-208ENST00000456953 ZFYVE28Q9HCC9 887 aa16.89■□□□□ 0.29
SNHG17-208ENST00000456953 MYBBP1AQ9BQG0 1328 aaKnown RBP16.89■□□□□ 0.29
SNHG17-208ENST00000456953 OTOFQ9HC10 1997 aa16.88■□□□□ 0.29
SNHG17-208ENST00000456953 NEURL1BA8MQ27 555 aa16.88■□□□□ 0.29
SNHG17-208ENST00000456953 F8W031 263 aaPredicted RBP16.88■□□□□ 0.29
SNHG17-208ENST00000456953 H7C1W4 665 aa16.88■□□□□ 0.29
SNHG17-208ENST00000456953 CHRNDQ07001 517 aa16.88■□□□□ 0.29
SNHG17-208ENST00000456953 TAF1CQ15572 869 aaPredicted RBP16.88■□□□□ 0.29
SNHG17-208ENST00000456953 CWF19L2Q2TBE0 894 aaKnown RBP16.88■□□□□ 0.29
SNHG17-208ENST00000456953 C15orf52Q6ZUT6 534 aaKnown RBP16.88■□□□□ 0.29
SNHG17-208ENST00000456953 PLA2G12BQ9BX93 195 aa16.88■□□□□ 0.29
SNHG17-208ENST00000456953 ELP3Q9H9T3 547 aa16.88■□□□□ 0.29
SNHG17-208ENST00000456953 ADAMTS8Q9UP79 889 aa16.88■□□□□ 0.29
SNHG17-208ENST00000456953 IRS2Q9Y4H2 1338 aa16.88■□□□□ 0.29
SNHG17-208ENST00000456953 CUL9Q8IWT3 2517 aa16.88■□□□□ 0.29
SNHG17-208ENST00000456953 IL1R1P14778 569 aa16.87■□□□□ 0.29
SNHG17-208ENST00000456953 TNFAIP1Q13829 316 aa16.87■□□□□ 0.29
SNHG17-208ENST00000456953 BRI3BPQ8WY22 251 aa16.87■□□□□ 0.29
SNHG17-208ENST00000456953 LAMA3Q16787 3333 aa16.86■□□□□ 0.29
SNHG17-208ENST00000456953 CSF1RP07333 972 aa16.86■□□□□ 0.29
SNHG17-208ENST00000456953 GTF2A2P52657 109 aa16.86■□□□□ 0.29
SNHG17-208ENST00000456953 ZNF804AQ7Z570 1209 aa16.86■□□□□ 0.29
SNHG17-208ENST00000456953 AOX1Q06278 1338 aa16.86■□□□□ 0.29
SNHG17-208ENST00000456953 CCL15-CCL14A0A0B4J2E2 113 aa16.85■□□□□ 0.29
SNHG17-208ENST00000456953 WDHD1O75717 1129 aaPredicted RBP16.85■□□□□ 0.29
SNHG17-208ENST00000456953 MYCP01106 439 aaPredicted RBP16.85■□□□□ 0.29
SNHG17-208ENST00000456953 RBM5P52756 815 aaKnown RBP eCLIP16.85■□□□□ 0.291e-6■■■■□ 24
SNHG17-208ENST00000456953 DDX10Q13206 875 aaKnown RBP16.85■□□□□ 0.29
SNHG17-208ENST00000456953 CCL15Q16663 113 aa16.85■□□□□ 0.29
SNHG17-208ENST00000456953 CHRDL2Q6WN34 429 aa16.85■□□□□ 0.29
SNHG17-208ENST00000456953 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.85■□□□□ 0.29
SNHG17-208ENST00000456953 GNRH1P01148 92 aa16.84■□□□□ 0.29
SNHG17-208ENST00000456953 GCKRQ14397 625 aa16.84■□□□□ 0.29
SNHG17-208ENST00000456953 KIF22Q14807 665 aa16.84■□□□□ 0.29
SNHG17-208ENST00000456953 SPDYE2Q495Y8 402 aa16.84■□□□□ 0.29
SNHG17-208ENST00000456953 SH3TC2Q8TF17 1288 aa16.84■□□□□ 0.29
SNHG17-208ENST00000456953 CNKSR2Q8WXI2 1034 aa16.84■□□□□ 0.29
SNHG17-208ENST00000456953 STK31Q9BXU1 1019 aa16.84■□□□□ 0.29
SNHG17-208ENST00000456953 ANKRD18BA2A2Z9 1011 aa16.83■□□□□ 0.28
SNHG17-208ENST00000456953 SNAP23O00161 211 aa16.83■□□□□ 0.28
SNHG17-208ENST00000456953 TAF5LO75529 589 aa16.83■□□□□ 0.28
SNHG17-208ENST00000456953 VGLL4Q14135 290 aa16.83■□□□□ 0.28
SNHG17-208ENST00000456953 FAM43AQ8N2R8 423 aa16.83■□□□□ 0.28
SNHG17-208ENST00000456953 TEPSINQ96N21 525 aa16.83■□□□□ 0.28
SNHG17-208ENST00000456953 ZCCHC17Q9NP64 241 aaKnown RBP16.83■□□□□ 0.28
SNHG17-208ENST00000456953 ZNF70Q9UC06 446 aaPredicted RBP16.83■□□□□ 0.28
SNHG17-208ENST00000456953 CSADQ9Y600 493 aa16.83■□□□□ 0.28
SNHG17-208ENST00000456953 TLR2O60603 784 aa16.82■□□□□ 0.28
SNHG17-208ENST00000456953 CASP7P55210 303 aa16.82■□□□□ 0.28
SNHG17-208ENST00000456953 PRMT2P55345 433 aa16.82■□□□□ 0.28
SNHG17-208ENST00000456953 MAP3K9P80192 1104 aa16.82■□□□□ 0.28
SNHG17-208ENST00000456953 LACTBP83111 547 aaPredicted RBP16.82■□□□□ 0.28
SNHG17-208ENST00000456953 TSPYL6Q8N831 410 aa16.82■□□□□ 0.28
SNHG17-208ENST00000456953 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.82■□□□□ 0.28
SNHG17-208ENST00000456953 MYH16Q9H6N6 1097 aa16.82■□□□□ 0.28
SNHG17-208ENST00000456953 RBM27Q9P2N5 1060 aaKnown RBP16.82■□□□□ 0.28
SNHG17-208ENST00000456953 SERPINA10Q9UK55 444 aa16.82■□□□□ 0.28
SNHG17-208ENST00000456953 APAF1O14727 1248 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms