RNA–Protein interactions for RNA: ENST00000456522.1

PTCHD1-202, Transcript of patched domain containing 1, humanhuman

TSL 1 (best)

Gene PTCHD1, Length 736 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1-202ENST00000456522 UTYO14607 1347 aa11.75□□□□□ -0.53
PTCHD1-202ENST00000456522 SH3TC1Q8TE82 1336 aa11.75□□□□□ -0.53
PTCHD1-202ENST00000456522 CARMIL3Q8ND23 1372 aa11.75□□□□□ -0.53
PTCHD1-202ENST00000456522 CASZ1Q86V15 1759 aa11.74□□□□□ -0.53
PTCHD1-202ENST00000456522 POLRMTO00411 1230 aaKnown RBP11.74□□□□□ -0.53
PTCHD1-202ENST00000456522 IRS4O14654 1257 aaPredicted RBP11.74□□□□□ -0.53
PTCHD1-202ENST00000456522 HRO43593 1189 aa11.74□□□□□ -0.53
PTCHD1-202ENST00000456522 HCLS1P14317 486 aaPredicted RBP11.74□□□□□ -0.53
PTCHD1-202ENST00000456522 TPTE2Q6XPS3 522 aa11.74□□□□□ -0.53
PTCHD1-202ENST00000456522 CNBD1Q8NA66 436 aa11.74□□□□□ -0.53
PTCHD1-202ENST00000456522 HDAC5Q9UQL6 1122 aa11.74□□□□□ -0.53
PTCHD1-202ENST00000456522 PARP3Q9Y6F1 533 aa11.74□□□□□ -0.53
PTCHD1-202ENST00000456522 EPHA10Q5JZY3 1008 aa11.73□□□□□ -0.53
PTCHD1-202ENST00000456522 LCE2DQ5TA82 110 aaPredicted RBP11.73□□□□□ -0.53
PTCHD1-202ENST00000456522 IBTKQ9P2D0 1353 aaPredicted RBP11.73□□□□□ -0.53
PTCHD1-202ENST00000456522 MYH3P11055 1940 aa11.72□□□□□ -0.53
PTCHD1-202ENST00000456522 DDX60Q8IY21 1712 aaKnown RBP11.72□□□□□ -0.53
PTCHD1-202ENST00000456522 CDHR2Q9BYE9 1310 aa11.72□□□□□ -0.53
PTCHD1-202ENST00000456522 CFHP08603 1231 aa11.72□□□□□ -0.53
PTCHD1-202ENST00000456522 USP17L8P0C7I0 530 aa11.72□□□□□ -0.53
PTCHD1-202ENST00000456522 LSM11P83369 360 aaKnown RBP eCLIP11.72□□□□□ -0.53
PTCHD1-202ENST00000456522 FUT2Q10981 343 aa11.72□□□□□ -0.53
PTCHD1-202ENST00000456522 AAMPQ13685 434 aa11.72□□□□□ -0.53
PTCHD1-202ENST00000456522 GRIPAP1Q4V328 841 aa11.72□□□□□ -0.53
PTCHD1-202ENST00000456522 ERICH6BQ5W0A0 696 aa11.72□□□□□ -0.53
PTCHD1-202ENST00000456522 PRR5LQ6MZQ0 368 aa11.72□□□□□ -0.53
PTCHD1-202ENST00000456522 KAZALD1Q96I82 304 aa11.72□□□□□ -0.53
PTCHD1-202ENST00000456522 CCDC85AQ96PX6 553 aaPredicted RBP11.72□□□□□ -0.53
PTCHD1-202ENST00000456522 BICC1Q9H694 974 aaKnown RBP11.72□□□□□ -0.53
PTCHD1-202ENST00000456522 CHMP3Q9Y3E7 222 aa11.72□□□□□ -0.53
PTCHD1-202ENST00000456522 ABCC12Q96J65 1359 aa11.71□□□□□ -0.53
PTCHD1-202ENST00000456522 PDE8AO60658 829 aa11.71□□□□□ -0.53
PTCHD1-202ENST00000456522 ST5P78524 1137 aa11.71□□□□□ -0.53
PTCHD1-202ENST00000456522 FOXO4P98177 505 aa11.71□□□□□ -0.53
PTCHD1-202ENST00000456522 MTMR2Q13614 643 aa11.71□□□□□ -0.53
PTCHD1-202ENST00000456522 ADGRD1Q6QNK2 874 aa11.71□□□□□ -0.53
PTCHD1-202ENST00000456522 LMBR1LQ6UX01 489 aa11.71□□□□□ -0.53
PTCHD1-202ENST00000456522 ANKRD44Q8N8A2 993 aa11.71□□□□□ -0.53
PTCHD1-202ENST00000456522 HLA-CQ95604 372 aa11.71□□□□□ -0.53
PTCHD1-202ENST00000456522 MTFR1LQ9H019 292 aa11.71□□□□□ -0.53
PTCHD1-202ENST00000456522 LAMB2P55268 1798 aa11.7□□□□□ -0.54
PTCHD1-202ENST00000456522 AP1G2O75843 785 aa11.7□□□□□ -0.54
PTCHD1-202ENST00000456522 HSP90B1P14625 803 aaKnown RBP11.7□□□□□ -0.54
PTCHD1-202ENST00000456522 GUCA2AQ02747 115 aa11.7□□□□□ -0.54
PTCHD1-202ENST00000456522 SLC10A5Q5PT55 438 aa11.7□□□□□ -0.54
PTCHD1-202ENST00000456522 CEP85Q6P2H3 762 aa11.7□□□□□ -0.54
PTCHD1-202ENST00000456522 PLA2G12BQ9BX93 195 aa11.7□□□□□ -0.54
PTCHD1-202ENST00000456522 PPP4R2Q9NY27 417 aa11.7□□□□□ -0.54
PTCHD1-202ENST00000456522 PNMA6EA0A0J9YXQ4 647 aa11.69□□□□□ -0.54
PTCHD1-202ENST00000456522 SRGAP3O43295 1099 aa11.69□□□□□ -0.54
PTCHD1-202ENST00000456522 POLD1P28340 1107 aa11.69□□□□□ -0.54
PTCHD1-202ENST00000456522 CTSWP56202 376 aa11.69□□□□□ -0.54
PTCHD1-202ENST00000456522 ATP8B2P98198 1209 aa11.69□□□□□ -0.54
PTCHD1-202ENST00000456522 RPAP2Q8IXW5 612 aaPredicted RBP11.69□□□□□ -0.54
PTCHD1-202ENST00000456522 CCDC136Q96JN2 1154 aa11.69□□□□□ -0.54
PTCHD1-202ENST00000456522 NLRP3Q96P20 1036 aa11.69□□□□□ -0.54
PTCHD1-202ENST00000456522 NRXN2Q9P2S2 1712 aa11.69□□□□□ -0.54
PTCHD1-202ENST00000456522 TNRC6CQ9HCJ0 1690 aaKnown RBP11.68□□□□□ -0.54
PTCHD1-202ENST00000456522 B4GALNT3Q6L9W6 998 aa11.68□□□□□ -0.54
PTCHD1-202ENST00000456522 SIRT2Q8IXJ6 389 aa11.68□□□□□ -0.54
PTCHD1-202ENST00000456522 TTLL11Q8NHH1 800 aa11.68□□□□□ -0.54
PTCHD1-202ENST00000456522 ANKRD31Q8N7Z5 1873 aa11.68□□□□□ -0.54
PTCHD1-202ENST00000456522 ACTN4O43707 911 aaKnown RBP11.67□□□□□ -0.54
PTCHD1-202ENST00000456522 HMMRO75330 724 aa11.67□□□□□ -0.54
PTCHD1-202ENST00000456522 IGHDP01880 384 aa11.67□□□□□ -0.54
PTCHD1-202ENST00000456522 CSF1RP07333 972 aa11.67□□□□□ -0.54
PTCHD1-202ENST00000456522 RABL6Q3YEC7 729 aaPredicted RBP11.67□□□□□ -0.54
PTCHD1-202ENST00000456522 KMT5BQ4FZB7 885 aa11.67□□□□□ -0.54
PTCHD1-202ENST00000456522 CCDC152Q4G0S7 254 aa11.67□□□□□ -0.54
PTCHD1-202ENST00000456522 RWDD1Q9H446 243 aaPredicted RBP11.67□□□□□ -0.54
PTCHD1-202ENST00000456522 GREM2Q9H772 168 aa11.67□□□□□ -0.54
PTCHD1-202ENST00000456522 TAF1P21675 1872 aa11.67□□□□□ -0.54
PTCHD1-202ENST00000456522 IFIT5Q13325 482 aaKnown RBP11.66□□□□□ -0.54
PTCHD1-202ENST00000456522 MTX1Q13505 466 aa11.66□□□□□ -0.54
PTCHD1-202ENST00000456522 SF3B3Q15393 1217 aaKnown RBP11.66□□□□□ -0.54
PTCHD1-202ENST00000456522 CCDC57Q2TAC2 916 aa11.66□□□□□ -0.54
PTCHD1-202ENST00000456522 TAF7LQ5H9L4 462 aa11.66□□□□□ -0.54
PTCHD1-202ENST00000456522 CCDC82Q8N4S0 544 aa11.66□□□□□ -0.54
PTCHD1-202ENST00000456522 KLHDC4Q8TBB5 520 aa11.66□□□□□ -0.54
PTCHD1-202ENST00000456522 SSH3Q8TE77 659 aa11.66□□□□□ -0.54
PTCHD1-202ENST00000456522 RPGRQ92834 1020 aaKnown RBP11.66□□□□□ -0.54
PTCHD1-202ENST00000456522 LRCH3Q96II8 777 aa11.66□□□□□ -0.54
PTCHD1-202ENST00000456522 BRIP1Q9BX63 1249 aa11.66□□□□□ -0.54
PTCHD1-202ENST00000456522 PA2G4Q9UQ80 394 aaKnown RBP11.66□□□□□ -0.54
PTCHD1-202ENST00000456522 SPEF2Q9C093 1822 aa11.65□□□□□ -0.54
PTCHD1-202ENST00000456522 ANKRD18BA2A2Z9 1011 aa11.65□□□□□ -0.54
PTCHD1-202ENST00000456522 ITGA6P23229 1130 aa11.65□□□□□ -0.54
PTCHD1-202ENST00000456522 PDE6BP35913 854 aa11.65□□□□□ -0.54
PTCHD1-202ENST00000456522 HDAC1Q13547 482 aaPredicted RBP11.65□□□□□ -0.54
PTCHD1-202ENST00000456522 MORN1Q5T089 497 aa11.65□□□□□ -0.54
PTCHD1-202ENST00000456522 FAM163AQ96GL9 167 aaPredicted RBP11.65□□□□□ -0.54
PTCHD1-202ENST00000456522 ZNF594Q96JF6 807 aaPredicted RBP11.65□□□□□ -0.54
PTCHD1-202ENST00000456522 SIL1Q9H173 461 aa11.65□□□□□ -0.54
PTCHD1-202ENST00000456522 SPON1Q9HCB6 807 aa11.65□□□□□ -0.54
PTCHD1-202ENST00000456522 GDPD2Q9HCC8 539 aa11.65□□□□□ -0.54
PTCHD1-202ENST00000456522 PRM3Q9NNZ6 103 aa11.65□□□□□ -0.54
PTCHD1-202ENST00000456522 SEC31BQ9NQW1 1179 aa11.65□□□□□ -0.54
PTCHD1-202ENST00000456522 PLSCR2Q9NRY7 297 aa11.65□□□□□ -0.54
PTCHD1-202ENST00000456522 PPP1R1BQ9UD71 204 aaPredicted RBP11.65□□□□□ -0.54
PTCHD1-202ENST00000456522 RIC1Q4ADV7 1423 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms