RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 WNT7AO00755 349 aa5.29□□□□□ -1.56
DEPDC1-202ENST00000456315 SCP2P22307 547 aa5.29□□□□□ -1.56
DEPDC1-202ENST00000456315 CLIC4Q9Y696 253 aa5.29□□□□□ -1.56
DEPDC1-202ENST00000456315 CCDC171Q6TFL3 1326 aa5.29□□□□□ -1.56
DEPDC1-202ENST00000456315 FREM2Q5SZK8 3169 aa5.28□□□□□ -1.56
DEPDC1-202ENST00000456315 SLC27A2O14975 620 aa5.28□□□□□ -1.56
DEPDC1-202ENST00000456315 SRGAP3O43295 1099 aa5.28□□□□□ -1.56
DEPDC1-202ENST00000456315 TAF5LO75529 589 aa5.28□□□□□ -1.56
DEPDC1-202ENST00000456315 GTF2A1P52655 376 aaPredicted RBP5.28□□□□□ -1.56
DEPDC1-202ENST00000456315 PRPF38AQ8NAV1 312 aaKnown RBP5.28□□□□□ -1.56
DEPDC1-202ENST00000456315 CDC5LQ99459 802 aaKnown RBP5.28□□□□□ -1.56
DEPDC1-202ENST00000456315 CCDC8Q9H0W5 538 aaPredicted RBP5.28□□□□□ -1.56
DEPDC1-202ENST00000456315 SENP2Q9HC62 589 aa5.28□□□□□ -1.56
DEPDC1-202ENST00000456315 KIF28PB7ZC32 967 aa5.28□□□□□ -1.56
DEPDC1-202ENST00000456315 BACH1O14867 736 aa5.28□□□□□ -1.56
DEPDC1-202ENST00000456315 RTN2O75298 545 aa5.28□□□□□ -1.56
DEPDC1-202ENST00000456315 IBSPP21815 317 aaPredicted RBP5.28□□□□□ -1.56
DEPDC1-202ENST00000456315 HNRNPH1P31943 449 aaKnown RBP5.28□□□□□ -1.56
DEPDC1-202ENST00000456315 TRADDQ15628 312 aa5.28□□□□□ -1.56
DEPDC1-202ENST00000456315 CWF19L2Q2TBE0 894 aaKnown RBP5.28□□□□□ -1.56
DEPDC1-202ENST00000456315 SWT1Q5T5J6 900 aaKnown RBP5.28□□□□□ -1.56
DEPDC1-202ENST00000456315 TTLL5Q6EMB2 1281 aa5.28□□□□□ -1.56
DEPDC1-202ENST00000456315 EGFL6Q8IUX8 553 aa5.28□□□□□ -1.56
DEPDC1-202ENST00000456315 NSUN7Q8NE18 718 aaKnown RBP5.28□□□□□ -1.56
DEPDC1-202ENST00000456315 VPS18Q9P253 973 aa5.28□□□□□ -1.56
DEPDC1-202ENST00000456315 REXO2Q9Y3B8 237 aaKnown RBP5.28□□□□□ -1.56
DEPDC1-202ENST00000456315 MRFAP1Q9Y605 127 aa5.28□□□□□ -1.56
DEPDC1-202ENST00000456315 CCT2P78371 535 aaKnown RBP5.28□□□□□ -1.56
DEPDC1-202ENST00000456315 SNX1Q13596 522 aa5.28□□□□□ -1.56
DEPDC1-202ENST00000456315 STK11IPQ8N1F8 1099 aa5.28□□□□□ -1.56
DEPDC1-202ENST00000456315 BICD2Q8TD16 824 aa5.28□□□□□ -1.56
DEPDC1-202ENST00000456315 EXOC4Q96A65 974 aa5.28□□□□□ -1.56
DEPDC1-202ENST00000456315 SHISA4Q96DD7 197 aa5.28□□□□□ -1.56
DEPDC1-202ENST00000456315 KIAA1468Q9P260 1216 aa5.28□□□□□ -1.56
DEPDC1-202ENST00000456315 DUSP10Q9Y6W6 482 aa5.28□□□□□ -1.56
DEPDC1-202ENST00000456315 RICTORQ6R327 1708 aa5.28□□□□□ -1.56
DEPDC1-202ENST00000456315 PHF14O94880 888 aa5.28□□□□□ -1.56
DEPDC1-202ENST00000456315 MAGEA9P43362 315 aa5.28□□□□□ -1.56
DEPDC1-202ENST00000456315 GRAMD1CQ8IYS0 662 aa5.28□□□□□ -1.56
DEPDC1-202ENST00000456315 CD248Q9HCU0 757 aa5.28□□□□□ -1.56
DEPDC1-202ENST00000456315 HDAC6Q9UBN7 1215 aa5.28□□□□□ -1.56
DEPDC1-202ENST00000456315 SPENQ96T58 3664 aaKnown RBP5.28□□□□□ -1.56
DEPDC1-202ENST00000456315 CDC42BPGQ6DT37 1551 aa5.28□□□□□ -1.56
DEPDC1-202ENST00000456315 FXR1P51114 621 aaKnown RBP eCLIP5.27□□□□□ -1.57
DEPDC1-202ENST00000456315 SPECC1Q5M775 1068 aa5.27□□□□□ -1.57
DEPDC1-202ENST00000456315 TRMT44Q8IYL2 757 aaKnown RBP5.27□□□□□ -1.57
DEPDC1-202ENST00000456315 RAB21Q9UL25 225 aa5.27□□□□□ -1.57
DEPDC1-202ENST00000456315 ZFYVE16Q7Z3T8 1539 aa5.27□□□□□ -1.57
DEPDC1-202ENST00000456315 PI4KAP2A4QPH2 592 aa5.27□□□□□ -1.57
DEPDC1-202ENST00000456315 RCCD1A6NED2 376 aa5.27□□□□□ -1.57
DEPDC1-202ENST00000456315 CUTAO60888 179 aa5.27□□□□□ -1.57
DEPDC1-202ENST00000456315 PI4KAP1Q8N8J0 262 aa5.27□□□□□ -1.57
DEPDC1-202ENST00000456315 BOLA2Q9H3K6 86 aa5.27□□□□□ -1.57
DEPDC1-202ENST00000456315 SALL1Q9NSC2 1324 aa5.27□□□□□ -1.57
DEPDC1-202ENST00000456315 MYH6P13533 1939 aa5.27□□□□□ -1.57
DEPDC1-202ENST00000456315 GNAI2P04899 355 aa5.27□□□□□ -1.57
DEPDC1-202ENST00000456315 CSB-PGBD3P0DP91 1061 aa5.27□□□□□ -1.57
DEPDC1-202ENST00000456315 NMIQ13287 307 aaPredicted RBP5.27□□□□□ -1.57
DEPDC1-202ENST00000456315 MTX1Q13505 466 aa5.27□□□□□ -1.57
DEPDC1-202ENST00000456315 TMCO3Q6UWJ1 677 aa5.27□□□□□ -1.57
DEPDC1-202ENST00000456315 TERF2IPQ9NYB0 399 aa5.27□□□□□ -1.57
DEPDC1-202ENST00000456315 PCDHA5Q9Y5H7 936 aa5.27□□□□□ -1.57
DEPDC1-202ENST00000456315 CRYBG1Q9Y4K1 1723 aa5.27□□□□□ -1.57
DEPDC1-202ENST00000456315 LTBP4Q8N2S1 1624 aa5.27□□□□□ -1.57
DEPDC1-202ENST00000456315 USP32Q8NFA0 1604 aa5.27□□□□□ -1.57
DEPDC1-202ENST00000456315 ZSCAN5CA6NGD5 496 aaPredicted RBP5.27□□□□□ -1.57
DEPDC1-202ENST00000456315 SOWAHDA6NJG2 315 aa5.27□□□□□ -1.57
DEPDC1-202ENST00000456315 POLR3DP05423 398 aaPredicted RBP5.27□□□□□ -1.57
DEPDC1-202ENST00000456315 MYBL1P10243 752 aa5.27□□□□□ -1.57
DEPDC1-202ENST00000456315 PAX7P23759 505 aa5.27□□□□□ -1.57
DEPDC1-202ENST00000456315 ARHGAP25P42331 645 aa5.27□□□□□ -1.57
DEPDC1-202ENST00000456315 TBX2Q13207 712 aaPredicted RBP5.27□□□□□ -1.57
DEPDC1-202ENST00000456315 EFCAB2Q5VUJ9 269 aa5.27□□□□□ -1.57
DEPDC1-202ENST00000456315 TM6SF1Q9BZW5 370 aa5.27□□□□□ -1.57
DEPDC1-202ENST00000456315 LACRTQ9GZZ8 138 aa5.27□□□□□ -1.57
DEPDC1-202ENST00000456315 CCDC151A5D8V7 595 aa5.27□□□□□ -1.57
DEPDC1-202ENST00000456315 PSDA5PKW4 1024 aaPredicted RBP5.27□□□□□ -1.57
DEPDC1-202ENST00000456315 SRGAP2O75044 1071 aa5.27□□□□□ -1.57
DEPDC1-202ENST00000456315 RHOXF2BP0C7M4 288 aa5.27□□□□□ -1.57
DEPDC1-202ENST00000456315 IRAK1P51617 712 aa5.27□□□□□ -1.57
DEPDC1-202ENST00000456315 GNG11P61952 73 aa5.27□□□□□ -1.57
DEPDC1-202ENST00000456315 PPARAQ07869 468 aa5.27□□□□□ -1.57
DEPDC1-202ENST00000456315 CASP8Q14790 479 aa5.27□□□□□ -1.57
DEPDC1-202ENST00000456315 TAF7Q15545 349 aaPredicted RBP5.27□□□□□ -1.57
DEPDC1-202ENST00000456315 LONRF3Q496Y0 759 aa5.27□□□□□ -1.57
DEPDC1-202ENST00000456315 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.27□□□□□ -1.57
DEPDC1-202ENST00000456315 SH2D3CQ8N5H7 860 aa5.27□□□□□ -1.57
DEPDC1-202ENST00000456315 CNNM3Q8NE01 707 aa5.27□□□□□ -1.57
DEPDC1-202ENST00000456315 GOLGA5Q8TBA6 731 aa5.27□□□□□ -1.57
DEPDC1-202ENST00000456315 XAGE2Q96GT9 111 aa5.27□□□□□ -1.57
DEPDC1-202ENST00000456315 RHOXF2Q9BQY4 288 aa5.27□□□□□ -1.57
DEPDC1-202ENST00000456315 AMPD2Q01433 879 aa5.26□□□□□ -1.57
DEPDC1-202ENST00000456315 TBC1D8BQ0IIM8 1120 aa5.26□□□□□ -1.57
DEPDC1-202ENST00000456315 METTL16Q86W50 562 aaKnown RBP5.26□□□□□ -1.57
DEPDC1-202ENST00000456315 LINC00301Q8NCQ3 95 aa5.26□□□□□ -1.57
DEPDC1-202ENST00000456315 BANK1Q8NDB2 785 aa5.26□□□□□ -1.57
DEPDC1-202ENST00000456315 SMARCC2Q8TAQ2 1214 aa5.26□□□□□ -1.57
DEPDC1-202ENST00000456315 ARL8AQ96BM9 186 aa5.26□□□□□ -1.57
DEPDC1-202ENST00000456315 SCAND2PQ9GZW5 306 aaPredicted RBP5.26□□□□□ -1.57
DEPDC1-202ENST00000456315 LZTFL1Q9NQ48 299 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms