RNA–Protein interactions for RNA: ENST00000455878.2

PSMC4-202, Transcript of proteasome 26S subunit, ATPase 4, humanhuman

TSL 1 (best) BASIC

Gene PSMC4, Length 1,333 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC4-202ENST00000455878 HPS5Q9UPZ3 1129 aa16.94■□□□□ 0.3
PSMC4-202ENST00000455878 TNRC18O15417 2968 aaPredicted RBP16.93■□□□□ 0.3
PSMC4-202ENST00000455878 PDE4DIPQ5VU43 2346 aa16.93■□□□□ 0.3
PSMC4-202ENST00000455878 PSME4Q14997 1843 aa16.93■□□□□ 0.3
PSMC4-202ENST00000455878 ALDH1A1P00352 501 aa16.93■□□□□ 0.3
PSMC4-202ENST00000455878 CASP7P55210 303 aa16.93■□□□□ 0.3
PSMC4-202ENST00000455878 TAF7LQ5H9L4 462 aa16.93■□□□□ 0.3
PSMC4-202ENST00000455878 ZNF804AQ7Z570 1209 aa16.93■□□□□ 0.3
PSMC4-202ENST00000455878 HELBQ8NG08 1087 aaPredicted RBP16.93■□□□□ 0.3
PSMC4-202ENST00000455878 FKTNO75072 461 aa16.92■□□□□ 0.3
PSMC4-202ENST00000455878 VAMP4O75379 141 aa16.92■□□□□ 0.3
PSMC4-202ENST00000455878 CCDC57Q2TAC2 916 aa16.92■□□□□ 0.3
PSMC4-202ENST00000455878 SUPT20HL1Q3ZLR7 823 aa16.92■□□□□ 0.3
PSMC4-202ENST00000455878 NOM1Q5C9Z4 860 aaKnown RBP16.92■□□□□ 0.3
PSMC4-202ENST00000455878 LDLRAD1Q5T700 205 aa16.92■□□□□ 0.3
PSMC4-202ENST00000455878 MYH3P11055 1940 aa16.92■□□□□ 0.3
PSMC4-202ENST00000455878 F8W031 263 aaPredicted RBP16.91■□□□□ 0.3
PSMC4-202ENST00000455878 PLIN1O60240 522 aa16.91■□□□□ 0.3
PSMC4-202ENST00000455878 RBM5P52756 815 aaKnown RBP eCLIP16.91■□□□□ 0.3
PSMC4-202ENST00000455878 SPRYD7Q5W111 196 aa16.91■□□□□ 0.3
PSMC4-202ENST00000455878 ZBED3Q96IU2 234 aaPredicted RBP16.91■□□□□ 0.3
PSMC4-202ENST00000455878 MANSC4A6NHS7 340 aaPredicted RBP16.9■□□□□ 0.3
PSMC4-202ENST00000455878 SNAP23O00161 211 aa16.9■□□□□ 0.3
PSMC4-202ENST00000455878 FOXO4P98177 505 aa16.9■□□□□ 0.3
PSMC4-202ENST00000455878 EXOSC9Q06265 439 aaKnown RBP16.9■□□□□ 0.3
PSMC4-202ENST00000455878 LDHAL6AQ6ZMR3 332 aa16.9■□□□□ 0.3
PSMC4-202ENST00000455878 C15orf52Q6ZUT6 534 aaKnown RBP16.9■□□□□ 0.3
PSMC4-202ENST00000455878 MTMR14Q8NCE2 650 aa16.9■□□□□ 0.3
PSMC4-202ENST00000455878 CNNM1Q9NRU3 951 aa16.9■□□□□ 0.3
PSMC4-202ENST00000455878 C9orf78Q9NZ63 289 aaPredicted RBP16.9■□□□□ 0.3
PSMC4-202ENST00000455878 PPP2R3BQ9Y5P8 575 aa16.9■□□□□ 0.3
PSMC4-202ENST00000455878 IL1R1P14778 569 aa16.89■□□□□ 0.29
PSMC4-202ENST00000455878 FKBP1AP62942 108 aaKnown RBP16.89■□□□□ 0.29
PSMC4-202ENST00000455878 CFAP100Q494V2 611 aa16.89■□□□□ 0.29
PSMC4-202ENST00000455878 FBXO46Q6PJ61 603 aaPredicted RBP16.89■□□□□ 0.29
PSMC4-202ENST00000455878 LMBR1LQ6UX01 489 aa16.89■□□□□ 0.29
PSMC4-202ENST00000455878 VEZTQ9HBM0 779 aa16.89■□□□□ 0.29
PSMC4-202ENST00000455878 UNCXA6NJT0 531 aa16.88■□□□□ 0.29
PSMC4-202ENST00000455878 F6X3S4 739 aa16.88■□□□□ 0.29
PSMC4-202ENST00000455878 BEND3Q5T5X7 828 aa16.88■□□□□ 0.29
PSMC4-202ENST00000455878 OTUD7BQ6GQQ9 843 aa16.88■□□□□ 0.29
PSMC4-202ENST00000455878 CERS5Q8N5B7 392 aa16.88■□□□□ 0.29
PSMC4-202ENST00000455878 CFHR5Q9BXR6 569 aa16.88■□□□□ 0.29
PSMC4-202ENST00000455878 SPEF2Q9C093 1822 aa16.87■□□□□ 0.29
PSMC4-202ENST00000455878 CLRN2A0PK11 232 aa16.87■□□□□ 0.29
PSMC4-202ENST00000455878 ZBTB48P10074 688 aaPredicted RBP16.87■□□□□ 0.29
PSMC4-202ENST00000455878 IREB2P48200 963 aaKnown RBP16.87■□□□□ 0.29
PSMC4-202ENST00000455878 MAP3K11Q16584 847 aa16.87■□□□□ 0.29
PSMC4-202ENST00000455878 PRMT6Q96LA8 375 aaPredicted RBP16.87■□□□□ 0.29
PSMC4-202ENST00000455878 FZD1Q9UP38 647 aa16.87■□□□□ 0.29
PSMC4-202ENST00000455878 SPDYE2BA6NHP3 402 aa16.86■□□□□ 0.29
PSMC4-202ENST00000455878 GRM8O00222 908 aa16.86■□□□□ 0.29
PSMC4-202ENST00000455878 SPDYE6P0CI01 402 aa16.86■□□□□ 0.29
PSMC4-202ENST00000455878 IFNL1Q8IU54 200 aa16.86■□□□□ 0.29
PSMC4-202ENST00000455878 ZNF594Q96JF6 807 aaPredicted RBP16.86■□□□□ 0.29
PSMC4-202ENST00000455878 JAG2Q9Y219 1238 aa16.86■□□□□ 0.29
PSMC4-202ENST00000455878 COL1A1P02452 1464 aaPredicted RBP16.85■□□□□ 0.29
PSMC4-202ENST00000455878 SLC4A10Q6U841 1118 aa16.85■□□□□ 0.29
PSMC4-202ENST00000455878 R3HDMLQ9H3Y0 253 aa16.85■□□□□ 0.29
PSMC4-202ENST00000455878 HIBADHP31937 336 aaKnown RBP16.84■□□□□ 0.29
PSMC4-202ENST00000455878 TNFAIP1Q13829 316 aa16.84■□□□□ 0.29
PSMC4-202ENST00000455878 RASA3Q14644 834 aa16.84■□□□□ 0.29
PSMC4-202ENST00000455878 NBPF12Q5TAG4 269 aaPredicted RBP16.84■□□□□ 0.29
PSMC4-202ENST00000455878 PRPF38BQ5VTL8 546 aaKnown RBP16.84■□□□□ 0.29
PSMC4-202ENST00000455878 ANKRD13AQ8IZ07 590 aa16.84■□□□□ 0.29
PSMC4-202ENST00000455878 WNK4Q96J92 1243 aa16.84■□□□□ 0.29
PSMC4-202ENST00000455878 PCDH10Q9P2E7 1040 aa16.84■□□□□ 0.29
PSMC4-202ENST00000455878 PCDHAC2Q9Y5I4 1007 aa16.84■□□□□ 0.29
PSMC4-202ENST00000455878 IRS2Q9Y4H2 1338 aa16.83■□□□□ 0.29
PSMC4-202ENST00000455878 USP2O75604 605 aaPredicted RBP16.83■□□□□ 0.28
PSMC4-202ENST00000455878 ALDH1L1O75891 902 aa16.83■□□□□ 0.28
PSMC4-202ENST00000455878 UBE4AQ14139 1066 aa16.83■□□□□ 0.28
PSMC4-202ENST00000455878 EPHA10Q5JZY3 1008 aa16.83■□□□□ 0.28
PSMC4-202ENST00000455878 VPS37DQ86XT2 251 aa16.83■□□□□ 0.28
PSMC4-202ENST00000455878 CLMNQ96JQ2 1002 aa16.83■□□□□ 0.28
PSMC4-202ENST00000455878 SRCIN1Q9C0H9 1055 aa16.83■□□□□ 0.28
PSMC4-202ENST00000455878 TTF2Q9UNY4 1162 aaKnown RBP16.83■□□□□ 0.28
PSMC4-202ENST00000455878 TRIM17Q9Y577 477 aa16.83■□□□□ 0.28
PSMC4-202ENST00000455878 CACNA1FO60840 1977 aa16.83■□□□□ 0.28
PSMC4-202ENST00000455878 MFSD14BQ5SR56 506 aa16.82■□□□□ 0.28
PSMC4-202ENST00000455878 SERPINA10Q9UK55 444 aa16.82■□□□□ 0.28
PSMC4-202ENST00000455878 FAM205AQ6ZU69 1335 aa16.82■□□□□ 0.28
PSMC4-202ENST00000455878 TNNI2P48788 182 aa16.81■□□□□ 0.28
PSMC4-202ENST00000455878 INTS3Q68E01 1043 aaKnown RBP16.81■□□□□ 0.28
PSMC4-202ENST00000455878 TDRD7Q8NHU6 1098 aaKnown RBP16.81■□□□□ 0.28
PSMC4-202ENST00000455878 ERO1AQ96HE7 468 aa16.81■□□□□ 0.28
PSMC4-202ENST00000455878 FRAT2O75474 233 aaPredicted RBP16.8■□□□□ 0.28
PSMC4-202ENST00000455878 GYG1P46976 350 aa16.8■□□□□ 0.28
PSMC4-202ENST00000455878 FAM84BQ96KN1 310 aaPredicted RBP16.8■□□□□ 0.28
PSMC4-202ENST00000455878 TDRD3Q9H7E2 651 aaKnown RBP16.8■□□□□ 0.28
PSMC4-202ENST00000455878 ZNF70Q9UC06 446 aaPredicted RBP16.8■□□□□ 0.28
PSMC4-202ENST00000455878 IGF2BP3O00425 579 aaKnown RBP eCLIP16.79■□□□□ 0.28
PSMC4-202ENST00000455878 ARHGEF6Q15052 776 aa16.79■□□□□ 0.28
PSMC4-202ENST00000455878 CAVIN4Q5BKX8 364 aa16.79■□□□□ 0.28
PSMC4-202ENST00000455878 MROH5Q6ZUA9 1318 aa16.79■□□□□ 0.28
PSMC4-202ENST00000455878 SP3Q02447 781 aa16.78■□□□□ 0.28
PSMC4-202ENST00000455878 SPDYE2Q495Y8 402 aa16.78■□□□□ 0.28
PSMC4-202ENST00000455878 OTOP1Q7RTM1 612 aa16.78■□□□□ 0.28
PSMC4-202ENST00000455878 DZIP1LQ8IYY4 767 aaKnown RBP16.78■□□□□ 0.28
PSMC4-202ENST00000455878 ELP3Q9H9T3 547 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms