RNA–Protein interactions for RNA: ENST00000455554.2

LINC02540-201, Transcript of long intergenic non-protein coding RNA 2540, humanhuman

TSL 3 BASIC

Gene LINC02540, Length 570 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02540-201ENST00000455554 PRNPP04156 253 aa5.18□□□□□ -1.58
LINC02540-201ENST00000455554 PRKCSHP14314 528 aaPredicted RBP5.18□□□□□ -1.58
LINC02540-201ENST00000455554 ARL4DP49703 201 aa5.18□□□□□ -1.58
LINC02540-201ENST00000455554 C19orf57Q0VDD7 668 aa5.18□□□□□ -1.58
LINC02540-201ENST00000455554 NAA30Q147X3 362 aaPredicted RBP5.18□□□□□ -1.58
LINC02540-201ENST00000455554 NUTM2GQ5VZR2 741 aa5.18□□□□□ -1.58
LINC02540-201ENST00000455554 POU5F2Q8N7G0 328 aa5.18□□□□□ -1.58
LINC02540-201ENST00000455554 ABTB2Q8N961 1025 aa5.18□□□□□ -1.58
LINC02540-201ENST00000455554 ASIC4Q96FT7 647 aa5.18□□□□□ -1.58
LINC02540-201ENST00000455554 CNTN3Q9P232 1028 aa5.18□□□□□ -1.58
LINC02540-201ENST00000455554 STIM2Q9P246 746 aa5.18□□□□□ -1.58
LINC02540-201ENST00000455554 PDE2AO00408 941 aaPredicted RBP5.17□□□□□ -1.58
LINC02540-201ENST00000455554 ADMP35318 185 aa5.17□□□□□ -1.58
LINC02540-201ENST00000455554 FAM69CQ0P6D2 419 aa5.17□□□□□ -1.58
LINC02540-201ENST00000455554 ZNF438Q7Z4V0 828 aa5.17□□□□□ -1.58
LINC02540-201ENST00000455554 TP53INP2Q8IXH6 220 aa5.17□□□□□ -1.58
LINC02540-201ENST00000455554 C12orf50Q8NA57 414 aaPredicted RBP5.17□□□□□ -1.58
LINC02540-201ENST00000455554 METTL22Q9BUU2 404 aaPredicted RBP5.17□□□□□ -1.58
LINC02540-201ENST00000455554 CXXC1Q9P0U4 656 aaPredicted RBP5.17□□□□□ -1.58
LINC02540-201ENST00000455554 SALL4Q9UJQ4 1053 aa5.17□□□□□ -1.58
LINC02540-201ENST00000455554 ZMIZ1Q9ULJ6 1067 aa5.17□□□□□ -1.58
LINC02540-201ENST00000455554 FAM95CA0A1B0GW59 222 aa5.16□□□□□ -1.58
LINC02540-201ENST00000455554 TIAF1O95411 115 aa5.16□□□□□ -1.58
LINC02540-201ENST00000455554 JUNBP17275 347 aaPredicted RBP5.16□□□□□ -1.58
LINC02540-201ENST00000455554 ITGB5P18084 799 aa5.16□□□□□ -1.58
LINC02540-201ENST00000455554 ELOAQ14241 798 aaKnown RBP5.16□□□□□ -1.58
LINC02540-201ENST00000455554 NFKBIBQ15653 356 aa5.16□□□□□ -1.58
LINC02540-201ENST00000455554 PAOXQ6QHF9 649 aa5.16□□□□□ -1.58
LINC02540-201ENST00000455554 SMG8Q8ND04 991 aaKnown RBP5.16□□□□□ -1.58
LINC02540-201ENST00000455554 NUDT16Q96DE0 195 aaKnown RBP5.16□□□□□ -1.58
LINC02540-201ENST00000455554 TMPRSS13Q9BYE2 586 aa5.16□□□□□ -1.58
LINC02540-201ENST00000455554 SUGCTQ9HAC7 445 aa5.16□□□□□ -1.58
LINC02540-201ENST00000455554 CYP4F12Q9HCS2 524 aa5.16□□□□□ -1.58
LINC02540-201ENST00000455554 DZANK1Q9NVP4 752 aa5.16□□□□□ -1.58
LINC02540-201ENST00000455554 SOX13Q9UN79 622 aa5.16□□□□□ -1.58
LINC02540-201ENST00000455554 A6NHS1 94 aa5.15□□□□□ -1.59
LINC02540-201ENST00000455554 CYP26A1O43174 497 aa5.15□□□□□ -1.59
LINC02540-201ENST00000455554 DRD2P14416 443 aa5.15□□□□□ -1.59
LINC02540-201ENST00000455554 CES1P23141 567 aa5.15□□□□□ -1.59
LINC02540-201ENST00000455554 CDPF1Q6NVV7 123 aa5.15□□□□□ -1.59
LINC02540-201ENST00000455554 STK32AQ8WU08 396 aa5.15□□□□□ -1.59
LINC02540-201ENST00000455554 USP26Q9BXU7 913 aa5.15□□□□□ -1.59
LINC02540-201ENST00000455554 BSDC1Q9NW68 430 aaPredicted RBP5.15□□□□□ -1.59
LINC02540-201ENST00000455554 LOC100289279A0A1B0GTE1 492 aa5.14□□□□□ -1.59
LINC02540-201ENST00000455554 RPLP1P05386 114 aaKnown RBP5.14□□□□□ -1.59
LINC02540-201ENST00000455554 USP11P51784 963 aa5.14□□□□□ -1.59
LINC02540-201ENST00000455554 IKBKEQ14164 716 aa5.14□□□□□ -1.59
LINC02540-201ENST00000455554 ATCAYQ86WG3 371 aa5.14□□□□□ -1.59
LINC02540-201ENST00000455554 WFDC3Q8IUB2 231 aa5.14□□□□□ -1.59
LINC02540-201ENST00000455554 C1orf127Q8N9H9 656 aa5.14□□□□□ -1.59
LINC02540-201ENST00000455554 TMEM102Q8N9M5 508 aaPredicted RBP5.14□□□□□ -1.59
LINC02540-201ENST00000455554 AGBL5Q8NDL9 886 aa5.14□□□□□ -1.59
LINC02540-201ENST00000455554 SLAIN2Q9P270 581 aa5.14□□□□□ -1.59
LINC02540-201ENST00000455554 FAM170BA6NMN3 283 aa5.13□□□□□ -1.59
LINC02540-201ENST00000455554 KRTAP9-7A8MTY7 169 aa5.13□□□□□ -1.59
LINC02540-201ENST00000455554 SOX1O00570 391 aaPredicted RBP5.13□□□□□ -1.59
LINC02540-201ENST00000455554 XKR5Q6UX68 686 aa5.13□□□□□ -1.59
LINC02540-201ENST00000455554 VN1R5Q7Z5H4 357 aa5.13□□□□□ -1.59
LINC02540-201ENST00000455554 ZAR1Q86SH2 424 aa5.13□□□□□ -1.59
LINC02540-201ENST00000455554 FLCNQ8NFG4 579 aa5.13□□□□□ -1.59
LINC02540-201ENST00000455554 FBLIM1Q8WUP2 373 aa5.13□□□□□ -1.59
LINC02540-201ENST00000455554 BSNDQ8WZ55 320 aa5.13□□□□□ -1.59
LINC02540-201ENST00000455554 GATA6Q92908 595 aa5.13□□□□□ -1.59
LINC02540-201ENST00000455554 TBC1D32Q96NH3 1257 aa5.13□□□□□ -1.59
LINC02540-201ENST00000455554 YIPF2Q9BWQ6 316 aa5.13□□□□□ -1.59
LINC02540-201ENST00000455554 ZNF124Q15973 351 aa5.12□□□□□ -1.59
LINC02540-201ENST00000455554 ZNF648Q5T619 568 aaPredicted RBP5.12□□□□□ -1.59
LINC02540-201ENST00000455554 PMEPA1Q969W9 287 aa5.12□□□□□ -1.59
LINC02540-201ENST00000455554 CHRDQ9H2X0 955 aa5.12□□□□□ -1.59
LINC02540-201ENST00000455554 SOX17Q9H6I2 414 aaPredicted RBP5.12□□□□□ -1.59
LINC02540-201ENST00000455554 PAK6Q9NQU5 681 aaPredicted RBP5.12□□□□□ -1.59
LINC02540-201ENST00000455554 PRKAG2Q9UGJ0 569 aa5.12□□□□□ -1.59
LINC02540-201ENST00000455554 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.12□□□□□ -1.59
LINC02540-201ENST00000455554 PAPLNO95428 1278 aa5.11□□□□□ -1.59
LINC02540-201ENST00000455554 PCSK2P16519 638 aa5.11□□□□□ -1.59
LINC02540-201ENST00000455554 EXOSC6Q5RKV6 272 aaKnown RBP5.11□□□□□ -1.59
LINC02540-201ENST00000455554 C2CD4AQ8NCU7 369 aaPredicted RBP5.11□□□□□ -1.59
LINC02540-201ENST00000455554 EDEM1Q92611 657 aa5.11□□□□□ -1.59
LINC02540-201ENST00000455554 EZH1Q92800 747 aaPredicted RBP5.11□□□□□ -1.59
LINC02540-201ENST00000455554 NXPE3Q969Y0 559 aa5.11□□□□□ -1.59
LINC02540-201ENST00000455554 OSMRQ99650 979 aa5.11□□□□□ -1.59
LINC02540-201ENST00000455554 KRTAP4-11Q9BYQ6 195 aa5.11□□□□□ -1.59
LINC02540-201ENST00000455554 CARMIL2Q6F5E8 1435 aa5.11□□□□□ -1.59
LINC02540-201ENST00000455554 CTSBP07858 339 aa5.1□□□□□ -1.59
LINC02540-201ENST00000455554 DNM1Q05193 864 aaKnown RBP5.1□□□□□ -1.59
LINC02540-201ENST00000455554 SOX4Q06945 474 aaPredicted RBP5.1□□□□□ -1.59
LINC02540-201ENST00000455554 TMEM164Q5U3C3 297 aa5.1□□□□□ -1.59
LINC02540-201ENST00000455554 DUSP27Q5VZP5 1158 aa5.1□□□□□ -1.59
LINC02540-201ENST00000455554 ZNF574Q6ZN55 896 aaPredicted RBP5.1□□□□□ -1.59
LINC02540-201ENST00000455554 TTC16Q8NEE8 873 aa5.1□□□□□ -1.59
LINC02540-201ENST00000455554 CLP1Q92989 425 aaKnown RBP5.1□□□□□ -1.59
LINC02540-201ENST00000455554 ZKSCAN3Q9BRR0 538 aa5.1□□□□□ -1.59
LINC02540-201ENST00000455554 GGNBP2Q9H3C7 697 aa5.1□□□□□ -1.59
LINC02540-201ENST00000455554 ZNF777Q9ULD5 760 aaPredicted RBP5.1□□□□□ -1.59
LINC02540-201ENST00000455554 CYP27A1Q02318 531 aa5.09□□□□□ -1.59
LINC02540-201ENST00000455554 C8orf34Q49A92 452 aa5.09□□□□□ -1.59
LINC02540-201ENST00000455554 LRRC4CQ9HCJ2 640 aa5.09□□□□□ -1.59
LINC02540-201ENST00000455554 ZC3H7BQ9UGR2 993 aaKnown RBP5.09□□□□□ -1.59
LINC02540-201ENST00000455554 SEPT3Q9UH03 358 aa5.09□□□□□ -1.59
LINC02540-201ENST00000455554 EIF4EBP3O60516 100 aaPredicted RBP5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms