RNA–Protein interactions for RNA: ENST00000455069.1

HDAC9-217, Transcript of histone deacetylase 9, humanhuman

TSL 4

Gene HDAC9, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-217ENST00000455069 COL1A1P02452 1464 aaPredicted RBP14.09□□□□□ -0.15
HDAC9-217ENST00000455069 MVPQ14764 893 aaKnown RBP14.08□□□□□ -0.16
HDAC9-217ENST00000455069 PUM3Q15397 648 aaKnown RBP14.08□□□□□ -0.16
HDAC9-217ENST00000455069 KIF4BQ2VIQ3 1234 aa14.08□□□□□ -0.16
HDAC9-217ENST00000455069 FBXO33Q7Z6M2 555 aa14.08□□□□□ -0.16
HDAC9-217ENST00000455069 JAG2Q9Y219 1238 aa14.08□□□□□ -0.16
HDAC9-217ENST00000455069 ASTN2O75129 1339 aaPredicted RBP14.08□□□□□ -0.16
HDAC9-217ENST00000455069 CNTNAP1P78357 1384 aa14.08□□□□□ -0.16
HDAC9-217ENST00000455069 USP17L8P0C7I0 530 aa14.07□□□□□ -0.16
HDAC9-217ENST00000455069 HIBADHP31937 336 aaKnown RBP14.07□□□□□ -0.16
HDAC9-217ENST00000455069 IL15P40933 162 aaPredicted RBP14.07□□□□□ -0.16
HDAC9-217ENST00000455069 POLA2Q14181 598 aa14.07□□□□□ -0.16
HDAC9-217ENST00000455069 RBM26Q5T8P6 1007 aaKnown RBP14.07□□□□□ -0.16
HDAC9-217ENST00000455069 COG6Q9Y2V7 657 aa14.07□□□□□ -0.16
HDAC9-217ENST00000455069 MYO3BQ8WXR4 1341 aa14.07□□□□□ -0.16
HDAC9-217ENST00000455069 TMEM88BA6NKF7 163 aa14.06□□□□□ -0.16
HDAC9-217ENST00000455069 TRAF5O00463 557 aa14.06□□□□□ -0.16
HDAC9-217ENST00000455069 BCAMP50895 628 aa14.06□□□□□ -0.16
HDAC9-217ENST00000455069 KIAA0825Q8IV33 1275 aa14.06□□□□□ -0.16
HDAC9-217ENST00000455069 SSH3Q8TE77 659 aa14.06□□□□□ -0.16
HDAC9-217ENST00000455069 ZC3H15Q8WU90 426 aaKnown RBP14.06□□□□□ -0.16
HDAC9-217ENST00000455069 LPIN2Q92539 896 aa14.06□□□□□ -0.16
HDAC9-217ENST00000455069 GLIS2Q9BZE0 524 aaPredicted RBP14.06□□□□□ -0.16
HDAC9-217ENST00000455069 IQSEC3Q9UPP2 1182 aaPredicted RBP14.06□□□□□ -0.16
HDAC9-217ENST00000455069 FAM205AQ6ZU69 1335 aa14.06□□□□□ -0.16
HDAC9-217ENST00000455069 SASH1O94885 1247 aa14.05□□□□□ -0.16
HDAC9-217ENST00000455069 ATP8B2P98198 1209 aa14.05□□□□□ -0.16
HDAC9-217ENST00000455069 ATP2B3Q16720 1220 aa14.05□□□□□ -0.16
HDAC9-217ENST00000455069 CEP85Q6P2H3 762 aa14.05□□□□□ -0.16
HDAC9-217ENST00000455069 DLK2Q6UY11 383 aa14.05□□□□□ -0.16
HDAC9-217ENST00000455069 MYOZ2Q9NPC6 264 aa14.05□□□□□ -0.16
HDAC9-217ENST00000455069 CEP126Q9P2H0 1117 aa14.05□□□□□ -0.16
HDAC9-217ENST00000455069 IFIT1P09914 478 aaKnown RBP14.04□□□□□ -0.16
HDAC9-217ENST00000455069 MS4A1P11836 297 aa14.04□□□□□ -0.16
HDAC9-217ENST00000455069 SLC5A1P13866 664 aa14.04□□□□□ -0.16
HDAC9-217ENST00000455069 ADORA1P30542 326 aa14.04□□□□□ -0.16
HDAC9-217ENST00000455069 FKBP1AP62942 108 aaKnown RBP14.04□□□□□ -0.16
HDAC9-217ENST00000455069 TFCP2Q12800 502 aa14.04□□□□□ -0.16
HDAC9-217ENST00000455069 TNS4Q8IZW8 715 aa14.04□□□□□ -0.16
HDAC9-217ENST00000455069 GGA3Q9NZ52 723 aa14.04□□□□□ -0.16
HDAC9-217ENST00000455069 PDE3AQ14432 1141 aa14.03□□□□□ -0.16
HDAC9-217ENST00000455069 GRIK5Q16478 980 aa14.03□□□□□ -0.16
HDAC9-217ENST00000455069 CAVIN4Q5BKX8 364 aa14.03□□□□□ -0.16
HDAC9-217ENST00000455069 ZBED3Q96IU2 234 aaPredicted RBP14.03□□□□□ -0.16
HDAC9-217ENST00000455069 ZBTB40Q9NUA8 1239 aa14.03□□□□□ -0.16
HDAC9-217ENST00000455069 DDX19BQ9UMR2 479 aa14.03□□□□□ -0.16
HDAC9-217ENST00000455069 PCDHAC2Q9Y5I4 1007 aa14.03□□□□□ -0.16
HDAC9-217ENST00000455069 AKAP11Q9UKA4 1901 aa14.02□□□□□ -0.16
HDAC9-217ENST00000455069 AOX1Q06278 1338 aa14.02□□□□□ -0.17
HDAC9-217ENST00000455069 A0A1B0GUL7 405 aa14.02□□□□□ -0.17
HDAC9-217ENST00000455069 ADM5C9JUS6 153 aa14.02□□□□□ -0.17
HDAC9-217ENST00000455069 F8W031 263 aaPredicted RBP14.02□□□□□ -0.17
HDAC9-217ENST00000455069 WNT10BO00744 389 aa14.02□□□□□ -0.17
HDAC9-217ENST00000455069 PHKA1P46020 1223 aa14.02□□□□□ -0.17
HDAC9-217ENST00000455069 VEGFBP49765 207 aa14.02□□□□□ -0.17
HDAC9-217ENST00000455069 SCARF1Q14162 830 aa14.02□□□□□ -0.17
HDAC9-217ENST00000455069 NBPF9Q3BBW0 867 aa14.02□□□□□ -0.17
HDAC9-217ENST00000455069 MFSD14BQ5SR56 506 aa14.02□□□□□ -0.17
HDAC9-217ENST00000455069 CST9Q5W186 159 aa14.02□□□□□ -0.17
HDAC9-217ENST00000455069 VPS37DQ86XT2 251 aa14.02□□□□□ -0.17
HDAC9-217ENST00000455069 RASSF10A6NK89 507 aa14.01□□□□□ -0.17
HDAC9-217ENST00000455069 TIMM10P62072 90 aa14.01□□□□□ -0.17
HDAC9-217ENST00000455069 CHAF1AQ13111 956 aaPredicted RBP14.01□□□□□ -0.17
HDAC9-217ENST00000455069 ANGEL2Q5VTE6 544 aaKnown RBP14.01□□□□□ -0.17
HDAC9-217ENST00000455069 CDC37L1Q7L3B6 337 aa14.01□□□□□ -0.17
HDAC9-217ENST00000455069 USP48Q86UV5 1035 aa14.01□□□□□ -0.17
HDAC9-217ENST00000455069 SIRT2Q8IXJ6 389 aa14.01□□□□□ -0.17
HDAC9-217ENST00000455069 OGFOD1Q8N543 542 aa14.01□□□□□ -0.17
HDAC9-217ENST00000455069 SCAF8Q9UPN6 1271 aaKnown RBP14.01□□□□□ -0.17
HDAC9-217ENST00000455069 NOP58Q9Y2X3 529 aaKnown RBP14.01□□□□□ -0.17
HDAC9-217ENST00000455069 MYO5AQ9Y4I1 1855 aaKnown RBP14.01□□□□□ -0.17
HDAC9-217ENST00000455069 FOXN1O15353 648 aa14□□□□□ -0.17
HDAC9-217ENST00000455069 KRT26Q7Z3Y9 468 aa14□□□□□ -0.17
HDAC9-217ENST00000455069 GOLGA6L2Q8N9W4 650 aaPredicted RBP14□□□□□ -0.17
HDAC9-217ENST00000455069 THSD7BQ9C0I4 1608 aa14□□□□□ -0.17
HDAC9-217ENST00000455069 PITPNM2Q9BZ72 1349 aa13.99□□□□□ -0.17
HDAC9-217ENST00000455069 SURF6O75683 361 aaKnown RBP13.99□□□□□ -0.17
HDAC9-217ENST00000455069 MMP14P50281 582 aa13.99□□□□□ -0.17
HDAC9-217ENST00000455069 RRP1P56182 461 aaKnown RBP13.99□□□□□ -0.17
HDAC9-217ENST00000455069 G3BP1Q13283 466 aaKnown RBP eCLIP13.99□□□□□ -0.17
HDAC9-217ENST00000455069 DEFB115Q30KQ5 88 aa13.99□□□□□ -0.17
HDAC9-217ENST00000455069 CCDC102BQ68D86 513 aa13.99□□□□□ -0.17
HDAC9-217ENST00000455069 MTMR14Q8NCE2 650 aa13.99□□□□□ -0.17
HDAC9-217ENST00000455069 DCPSQ96C86 337 aaKnown RBP13.99□□□□□ -0.17
HDAC9-217ENST00000455069 XAGE2Q96GT9 111 aa13.99□□□□□ -0.17
HDAC9-217ENST00000455069 HDAC9Q9UKV0 1011 aa13.99□□□□□ -0.17
HDAC9-217ENST00000455069 MYH2Q9UKX2 1941 aa13.99□□□□□ -0.17
HDAC9-217ENST00000455069 SPDYE2BA6NHP3 402 aa13.98□□□□□ -0.17
HDAC9-217ENST00000455069 ZBTB22O15209 634 aa13.98□□□□□ -0.17
HDAC9-217ENST00000455069 FRAT2O75474 233 aaPredicted RBP13.98□□□□□ -0.17
HDAC9-217ENST00000455069 SPDYE6P0CI01 402 aa13.98□□□□□ -0.17
HDAC9-217ENST00000455069 RASGRF1Q13972 1273 aa13.98□□□□□ -0.17
HDAC9-217ENST00000455069 CFAP100Q494V2 611 aa13.98□□□□□ -0.17
HDAC9-217ENST00000455069 WBP1LQ9NX94 342 aa13.98□□□□□ -0.17
HDAC9-217ENST00000455069 TTF2Q9UNY4 1162 aaKnown RBP13.98□□□□□ -0.17
HDAC9-217ENST00000455069 EXOC6BQ9Y2D4 811 aa13.98□□□□□ -0.17
HDAC9-217ENST00000455069 AKAP2Q9Y2D5 859 aa13.98□□□□□ -0.17
HDAC9-217ENST00000455069 PAPPA2Q9BXP8 1791 aa13.97□□□□□ -0.17
HDAC9-217ENST00000455069 CELF2O95319 508 aaKnown RBP13.97□□□□□ -0.17
HDAC9-217ENST00000455069 DLGAP5Q15398 846 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms