RNA–Protein interactions for RNA: ENST00000454569.5

SCN9A-205, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,585 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-205ENST00000454569 FBXO33Q7Z6M2 555 aa13.41□□□□□ -0.26
SCN9A-205ENST00000454569 MPNDQ8N594 471 aa13.41□□□□□ -0.26
SCN9A-205ENST00000454569 PIM2Q9P1W9 311 aa13.41□□□□□ -0.26
SCN9A-205ENST00000454569 LEMD3Q9Y2U8 911 aa13.41□□□□□ -0.26
SCN9A-205ENST00000454569 DOCK2Q92608 1830 aa13.41□□□□□ -0.26
SCN9A-205ENST00000454569 RIMBP2O15034 1052 aa13.41□□□□□ -0.26
SCN9A-205ENST00000454569 GLRX3O76003 335 aaKnown RBP13.41□□□□□ -0.26
SCN9A-205ENST00000454569 KCNJ4P48050 445 aa13.41□□□□□ -0.26
SCN9A-205ENST00000454569 TTC39AQ5SRH9 613 aa13.41□□□□□ -0.26
SCN9A-205ENST00000454569 TMC4Q7Z404 712 aa13.41□□□□□ -0.26
SCN9A-205ENST00000454569 GGA1Q9UJY5 639 aa13.41□□□□□ -0.26
SCN9A-205ENST00000454569 ZNF646O15015 1829 aaPredicted RBP13.4□□□□□ -0.26
SCN9A-205ENST00000454569 TRIM6-TRIM34B2RNG4 842 aa13.4□□□□□ -0.26
SCN9A-205ENST00000454569 C6orf229H3BNL8 230 aa13.4□□□□□ -0.26
SCN9A-205ENST00000454569 SEC24BO95487 1268 aa13.4□□□□□ -0.26
SCN9A-205ENST00000454569 ATP2B4P23634 1241 aa13.4□□□□□ -0.26
SCN9A-205ENST00000454569 ARID4AP29374 1257 aaPredicted RBP13.4□□□□□ -0.26
SCN9A-205ENST00000454569 ZAP70P43403 619 aa13.4□□□□□ -0.26
SCN9A-205ENST00000454569 RASGRF1Q13972 1273 aa13.4□□□□□ -0.26
SCN9A-205ENST00000454569 SLFNL1Q499Z3 407 aa13.4□□□□□ -0.26
SCN9A-205ENST00000454569 CCDC158Q5M9N0 1113 aa13.4□□□□□ -0.26
SCN9A-205ENST00000454569 RILPL2Q969X0 211 aa13.4□□□□□ -0.26
SCN9A-205ENST00000454569 DNAJC2Q99543 621 aaKnown RBP13.4□□□□□ -0.26
SCN9A-205ENST00000454569 HAUS7Q99871 368 aa13.4□□□□□ -0.26
SCN9A-205ENST00000454569 HMG20BQ9P0W2 317 aa13.4□□□□□ -0.26
SCN9A-205ENST00000454569 COL4A5P29400 1685 aa13.39□□□□□ -0.27
SCN9A-205ENST00000454569 STK25O00506 426 aa13.39□□□□□ -0.27
SCN9A-205ENST00000454569 ERC2O15083 957 aa13.39□□□□□ -0.27
SCN9A-205ENST00000454569 DPP8Q6V1X1 898 aaPredicted RBP13.39□□□□□ -0.27
SCN9A-205ENST00000454569 GOLIM4O00461 696 aa13.38□□□□□ -0.27
SCN9A-205ENST00000454569 GTPBP6O43824 516 aaPredicted RBP13.38□□□□□ -0.27
SCN9A-205ENST00000454569 DALRD3Q5D0E6 543 aaKnown RBP13.38□□□□□ -0.27
SCN9A-205ENST00000454569 TBC1D9Q6ZT07 1266 aa13.38□□□□□ -0.27
SCN9A-205ENST00000454569 GPATCH3Q96I76 525 aa13.38□□□□□ -0.27
SCN9A-205ENST00000454569 ZNF512BQ96KM6 892 aaPredicted RBP13.38□□□□□ -0.27
SCN9A-205ENST00000454569 SYT17Q9BSW7 474 aa13.38□□□□□ -0.27
SCN9A-205ENST00000454569 JAG2Q9Y219 1238 aa13.38□□□□□ -0.27
SCN9A-205ENST00000454569 CYP2E1P05181 493 aaPredicted RBP13.37□□□□□ -0.27
SCN9A-205ENST00000454569 HIBADHP31937 336 aaKnown RBP13.37□□□□□ -0.27
SCN9A-205ENST00000454569 FKBP4Q02790 459 aaKnown RBP eCLIP13.37□□□□□ -0.27
SCN9A-205ENST00000454569 C15orf52Q6ZUT6 534 aaKnown RBP13.37□□□□□ -0.27
SCN9A-205ENST00000454569 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.37□□□□□ -0.27
SCN9A-205ENST00000454569 IL25Q9H293 177 aa13.37□□□□□ -0.27
SCN9A-205ENST00000454569 PIH1D3Q9NQM4 214 aaKnown RBP13.37□□□□□ -0.27
SCN9A-205ENST00000454569 BCS1LQ9Y276 419 aa13.37□□□□□ -0.27
SCN9A-205ENST00000454569 SBF1O95248 1867 aa13.37□□□□□ -0.27
SCN9A-205ENST00000454569 PYGBP11216 843 aa13.37□□□□□ -0.27
SCN9A-205ENST00000454569 DOK7Q18PE1 504 aa13.37□□□□□ -0.27
SCN9A-205ENST00000454569 SPATA5Q8NB90 893 aa13.37□□□□□ -0.27
SCN9A-205ENST00000454569 RTFDC1Q9BY42 306 aaPredicted RBP13.37□□□□□ -0.27
SCN9A-205ENST00000454569 KCNQ5Q9NR82 932 aa13.37□□□□□ -0.27
SCN9A-205ENST00000454569 PAG1Q9NWQ8 432 aa13.37□□□□□ -0.27
SCN9A-205ENST00000454569 MED23Q9ULK4 1368 aa13.36□□□□□ -0.27
SCN9A-205ENST00000454569 PRELPP51888 382 aa13.36□□□□□ -0.27
SCN9A-205ENST00000454569 CAVIN4Q5BKX8 364 aa13.36□□□□□ -0.27
SCN9A-205ENST00000454569 TDRD7Q8NHU6 1098 aaKnown RBP13.36□□□□□ -0.27
SCN9A-205ENST00000454569 BACH2Q9BYV9 841 aa13.36□□□□□ -0.27
SCN9A-205ENST00000454569 CD209Q9NNX6 404 aa13.36□□□□□ -0.27
SCN9A-205ENST00000454569 UQCRFS1P1P0C7P4 283 aa13.35□□□□□ -0.27
SCN9A-205ENST00000454569 CHMLP26374 656 aa13.35□□□□□ -0.27
SCN9A-205ENST00000454569 GRIK5Q16478 980 aa13.35□□□□□ -0.27
SCN9A-205ENST00000454569 AOC3Q16853 763 aa13.35□□□□□ -0.27
SCN9A-205ENST00000454569 WASHC4Q2M389 1173 aa13.35□□□□□ -0.27
SCN9A-205ENST00000454569 CCDC93Q567U6 631 aa13.35□□□□□ -0.27
SCN9A-205ENST00000454569 EVI5LQ96CN4 794 aa13.35□□□□□ -0.27
SCN9A-205ENST00000454569 PSME4Q14997 1843 aa13.35□□□□□ -0.27
SCN9A-205ENST00000454569 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.34□□□□□ -0.27
SCN9A-205ENST00000454569 NFKBIEO00221 500 aa13.34□□□□□ -0.27
SCN9A-205ENST00000454569 VPS37DQ86XT2 251 aa13.34□□□□□ -0.27
SCN9A-205ENST00000454569 CNTROBQ8N137 903 aa13.34□□□□□ -0.27
SCN9A-205ENST00000454569 ZFP91Q96JP5 570 aaPredicted RBP13.34□□□□□ -0.27
SCN9A-205ENST00000454569 DBNDD1Q9H9R9 158 aa13.34□□□□□ -0.27
SCN9A-205ENST00000454569 ZNF277Q9NRM2 450 aaPredicted RBP13.34□□□□□ -0.27
SCN9A-205ENST00000454569 PRKCSHP14314 528 aaPredicted RBP13.33□□□□□ -0.28
SCN9A-205ENST00000454569 IL1R1P14778 569 aa13.33□□□□□ -0.28
SCN9A-205ENST00000454569 CHAF1AQ13111 956 aaPredicted RBP13.33□□□□□ -0.28
SCN9A-205ENST00000454569 CC2D2BQ6DHV5 1058 aa13.33□□□□□ -0.28
SCN9A-205ENST00000454569 CHADLQ6NUI6 762 aa13.33□□□□□ -0.28
SCN9A-205ENST00000454569 KBTBD3Q8NAB2 608 aa13.33□□□□□ -0.28
SCN9A-205ENST00000454569 FAM227BQ96M60 508 aa13.33□□□□□ -0.28
SCN9A-205ENST00000454569 FSD1Q9BTV5 496 aa13.33□□□□□ -0.28
SCN9A-205ENST00000454569 ZC3H12CQ9C0D7 883 aaKnown RBP13.33□□□□□ -0.28
SCN9A-205ENST00000454569 TMX4Q9H1E5 349 aaPredicted RBP13.33□□□□□ -0.28
SCN9A-205ENST00000454569 MYH2Q9UKX2 1941 aa13.33□□□□□ -0.28
SCN9A-205ENST00000454569 CDC45O75419 566 aa13.32□□□□□ -0.28
SCN9A-205ENST00000454569 RASSF7Q02833 373 aa13.32□□□□□ -0.28
SCN9A-205ENST00000454569 ZNF804AQ7Z570 1209 aa13.32□□□□□ -0.28
SCN9A-205ENST00000454569 RTKN2Q8IZC4 609 aa13.32□□□□□ -0.28
SCN9A-205ENST00000454569 ZNF384Q8TF68 577 aa13.32□□□□□ -0.28
SCN9A-205ENST00000454569 SEC62Q99442 399 aaKnown RBP13.32□□□□□ -0.28
SCN9A-205ENST00000454569 PSMD1Q99460 953 aa13.32□□□□□ -0.28
SCN9A-205ENST00000454569 MXD3Q9BW11 206 aa13.32□□□□□ -0.28
SCN9A-205ENST00000454569 DICER1Q9UPY3 1922 aaKnown RBP13.32□□□□□ -0.28
SCN9A-205ENST00000454569 ADAMTSL1Q8N6G6 1762 aa13.32□□□□□ -0.28
SCN9A-205ENST00000454569 YDJCA8MPS7 323 aa13.32□□□□□ -0.28
SCN9A-205ENST00000454569 YBX3P16989 372 aaKnown RBP eCLIP13.32□□□□□ -0.28
SCN9A-205ENST00000454569 KIAA2012Q0VF49 1180 aa13.32□□□□□ -0.28
SCN9A-205ENST00000454569 GNL3LQ9NVN8 582 aaKnown RBP13.32□□□□□ -0.28
SCN9A-205ENST00000454569 A0A0D9SFI3 127 aa13.31□□□□□ -0.28
SCN9A-205ENST00000454569 FRAT2O75474 233 aaPredicted RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms