RNA–Protein interactions for RNA: ENST00000453040.5

CHL1-208, Transcript of cell adhesion molecule L1 like, humanhuman

TSL 2

Gene CHL1, Length 3,960 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1-208ENST00000453040 CLIP2Q9UDT6 1046 aa12.68□□□□□ -0.38
CHL1-208ENST00000453040 PLEKHG3A1L390 1219 aa12.67□□□□□ -0.38
CHL1-208ENST00000453040 PHAXQ9H814 394 aaKnown RBP12.67□□□□□ -0.38
CHL1-208ENST00000453040 CCDC61Q9Y6R9 512 aa12.67□□□□□ -0.38
CHL1-208ENST00000453040 GOLGA6L6A8MZA4 724 aa12.67□□□□□ -0.38
CHL1-208ENST00000453040 PRPF6O94906 941 aaKnown RBP12.67□□□□□ -0.38
CHL1-208ENST00000453040 CREB3L3Q68CJ9 461 aa12.67□□□□□ -0.38
CHL1-208ENST00000453040 NGDNQ8NEJ9 315 aaKnown RBP12.67□□□□□ -0.38
CHL1-208ENST00000453040 SMARCC2Q8TAQ2 1214 aa12.67□□□□□ -0.38
CHL1-208ENST00000453040 DDX19AQ9NUU7 478 aaKnown RBP12.67□□□□□ -0.38
CHL1-208ENST00000453040 SLC27A2O14975 620 aa12.67□□□□□ -0.38
CHL1-208ENST00000453040 HTATSF1O43719 755 aaKnown RBP12.67□□□□□ -0.38
CHL1-208ENST00000453040 TRMT1Q9NXH9 659 aaKnown RBP12.67□□□□□ -0.38
CHL1-208ENST00000453040 LMAN1P49257 510 aa12.66□□□□□ -0.38
CHL1-208ENST00000453040 PRDM16Q9HAZ2 1276 aa12.66□□□□□ -0.38
CHL1-208ENST00000453040 LMTK3Q96Q04 1460 aa12.66□□□□□ -0.38
CHL1-208ENST00000453040 PARP4Q9UKK3 1724 aaKnown RBP12.66□□□□□ -0.38
CHL1-208ENST00000453040 SBNO1A3KN83 1393 aa12.66□□□□□ -0.38
CHL1-208ENST00000453040 CTDNEP1O95476 244 aa12.66□□□□□ -0.38
CHL1-208ENST00000453040 NCAPHQ15003 741 aa12.66□□□□□ -0.38
CHL1-208ENST00000453040 ARMC3Q5W041 872 aa12.66□□□□□ -0.38
CHL1-208ENST00000453040 ANKRD23Q86SG2 305 aa12.66□□□□□ -0.38
CHL1-208ENST00000453040 TMEM139Q8IV31 216 aa12.66□□□□□ -0.38
CHL1-208ENST00000453040 RBM33Q96EV2 1170 aaKnown RBP12.66□□□□□ -0.38
CHL1-208ENST00000453040 SLC24A3Q9HC58 644 aa12.66□□□□□ -0.38
CHL1-208ENST00000453040 ZNF165P49910 485 aa12.66□□□□□ -0.38
CHL1-208ENST00000453040 BEND6Q5SZJ8 279 aaPredicted RBP12.66□□□□□ -0.38
CHL1-208ENST00000453040 PTPN14Q15678 1187 aa12.65□□□□□ -0.38
CHL1-208ENST00000453040 SLC5A9Q2M3M2 681 aa12.65□□□□□ -0.38
CHL1-208ENST00000453040 EFCAB13Q8IY85 973 aa12.65□□□□□ -0.38
CHL1-208ENST00000453040 UTYO14607 1347 aa12.65□□□□□ -0.38
CHL1-208ENST00000453040 MYBL2P10244 700 aa12.65□□□□□ -0.38
CHL1-208ENST00000453040 ADCY2Q08462 1091 aa12.65□□□□□ -0.38
CHL1-208ENST00000453040 PRPF40BQ6NWY9 871 aaKnown RBP12.65□□□□□ -0.38
CHL1-208ENST00000453040 BABAM1Q9NWV8 329 aa12.65□□□□□ -0.38
CHL1-208ENST00000453040 MRPL12P52815 198 aaKnown RBP12.65□□□□□ -0.38
CHL1-208ENST00000453040 KRT85P78386 507 aa12.65□□□□□ -0.38
CHL1-208ENST00000453040 NBPF5PQ86XG9 351 aaPredicted RBP12.65□□□□□ -0.38
CHL1-208ENST00000453040 JAKMIP1Q96N16 626 aaKnown RBP12.65□□□□□ -0.38
CHL1-208ENST00000453040 ANKZF1Q9H8Y5 726 aa12.65□□□□□ -0.38
CHL1-208ENST00000453040 NFAT5O94916 1531 aa12.65□□□□□ -0.38
CHL1-208ENST00000453040 LAMB4A4D0S4 1761 aa12.64□□□□□ -0.39
CHL1-208ENST00000453040 A0A087WWV3 80 aa12.64□□□□□ -0.39
CHL1-208ENST00000453040 EIF2S2P20042 333 aaKnown RBP12.64□□□□□ -0.39
CHL1-208ENST00000453040 MSL3Q8N5Y2 521 aaKnown RBP12.64□□□□□ -0.39
CHL1-208ENST00000453040 FAM227BQ96M60 508 aa12.64□□□□□ -0.39
CHL1-208ENST00000453040 TNMDQ9H2S6 317 aa12.64□□□□□ -0.39
CHL1-208ENST00000453040 RPS6KB1P23443 525 aa12.64□□□□□ -0.39
CHL1-208ENST00000453040 CCDC26Q8TAB7 109 aa12.64□□□□□ -0.39
CHL1-208ENST00000453040 EYA1Q99502 592 aa12.64□□□□□ -0.39
CHL1-208ENST00000453040 TSPYL4Q9UJ04 414 aa12.64□□□□□ -0.39
CHL1-208ENST00000453040 RCOR1Q9UKL0 485 aa12.64□□□□□ -0.39
CHL1-208ENST00000453040 SHOX2O60902 331 aaPredicted RBP12.64□□□□□ -0.39
CHL1-208ENST00000453040 TPM4P67936 248 aa12.64□□□□□ -0.39
CHL1-208ENST00000453040 CCDC158Q5M9N0 1113 aa12.64□□□□□ -0.39
CHL1-208ENST00000453040 CCDC30Q5VVM6 783 aa12.64□□□□□ -0.39
CHL1-208ENST00000453040 AGXT2Q9BYV1 514 aa12.64□□□□□ -0.39
CHL1-208ENST00000453040 CAND2O75155 1236 aa12.63□□□□□ -0.39
CHL1-208ENST00000453040 CAVIN2O95810 425 aa12.63□□□□□ -0.39
CHL1-208ENST00000453040 DEF6Q9H4E7 631 aa12.63□□□□□ -0.39
CHL1-208ENST00000453040 CD248Q9HCU0 757 aa12.63□□□□□ -0.39
CHL1-208ENST00000453040 RBM8AQ9Y5S9 174 aaKnown RBP12.63□□□□□ -0.39
CHL1-208ENST00000453040 SKILP12757 684 aa12.63□□□□□ -0.39
CHL1-208ENST00000453040 KIFC2Q96AC6 838 aa12.63□□□□□ -0.39
CHL1-208ENST00000453040 BPIFA3Q9BQP9 254 aa12.63□□□□□ -0.39
CHL1-208ENST00000453040 SCAND2PQ9GZW5 306 aaPredicted RBP12.63□□□□□ -0.39
CHL1-208ENST00000453040 GNL3LQ9NVN8 582 aaKnown RBP12.63□□□□□ -0.39
CHL1-208ENST00000453040 A0A0D9SFI3 127 aa12.63□□□□□ -0.39
CHL1-208ENST00000453040 NEMFO60524 1076 aa12.63□□□□□ -0.39
CHL1-208ENST00000453040 SASH1O94885 1247 aa12.63□□□□□ -0.39
CHL1-208ENST00000453040 ELF1P32519 619 aa12.63□□□□□ -0.39
CHL1-208ENST00000453040 APOBRQ0VD83 1088 aa12.63□□□□□ -0.39
CHL1-208ENST00000453040 MTA1Q13330 715 aa12.63□□□□□ -0.39
CHL1-208ENST00000453040 PREPLQ4J6C6 727 aaPredicted RBP12.63□□□□□ -0.39
CHL1-208ENST00000453040 ZNF589Q86UQ0 364 aaPredicted RBP12.63□□□□□ -0.39
CHL1-208ENST00000453040 DRC7Q8IY82 874 aa12.63□□□□□ -0.39
CHL1-208ENST00000453040 CNTROBQ8N137 903 aa12.63□□□□□ -0.39
CHL1-208ENST00000453040 PARD6BQ9BYG5 372 aa12.63□□□□□ -0.39
CHL1-208ENST00000453040 GRIN2DO15399 1336 aa12.63□□□□□ -0.39
CHL1-208ENST00000453040 CCDC69A6NI79 296 aa12.62□□□□□ -0.39
CHL1-208ENST00000453040 SNX1Q13596 522 aa12.62□□□□□ -0.39
CHL1-208ENST00000453040 FERMT3Q86UX7 667 aa12.62□□□□□ -0.39
CHL1-208ENST00000453040 FLT4P35916 1363 aa12.62□□□□□ -0.39
CHL1-208ENST00000453040 TJP1Q07157 1748 aa12.62□□□□□ -0.39
CHL1-208ENST00000453040 JAK2O60674 1132 aa12.62□□□□□ -0.39
CHL1-208ENST00000453040 SYF2O95926 243 aaKnown RBP12.62□□□□□ -0.39
CHL1-208ENST00000453040 LARP1BQ659C4 914 aaKnown RBP12.62□□□□□ -0.39
CHL1-208ENST00000453040 TEX13AQ9BXU3 409 aaPredicted RBP12.62□□□□□ -0.39
CHL1-208ENST00000453040 FTOQ9C0B1 505 aaKnown RBP eCLIP12.62□□□□□ -0.39
CHL1-208ENST00000453040 ETAA1Q9NY74 926 aa12.62□□□□□ -0.39
CHL1-208ENST00000453040 TFIP11Q9UBB9 837 aaKnown RBP12.62□□□□□ -0.39
CHL1-208ENST00000453040 RNF20Q5VTR2 975 aa12.62□□□□□ -0.39
CHL1-208ENST00000453040 FMR1NBQ8N0W7 255 aaPredicted RBP12.62□□□□□ -0.39
CHL1-208ENST00000453040 TRIM5Q9C035 493 aa12.62□□□□□ -0.39
CHL1-208ENST00000453040 EHD4Q9H223 541 aa12.62□□□□□ -0.39
CHL1-208ENST00000453040 CYP46A1Q9Y6A2 500 aa12.62□□□□□ -0.39
CHL1-208ENST00000453040 FER1L4A9Z1Z3 1794 aa12.61□□□□□ -0.39
CHL1-208ENST00000453040 A0A087WUV0 522 aaPredicted RBP12.61□□□□□ -0.39
CHL1-208ENST00000453040 PSDA5PKW4 1024 aaPredicted RBP12.61□□□□□ -0.39
CHL1-208ENST00000453040 PNKPQ96T60 521 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms