RNA–Protein interactions for RNA: ENST00000451823.2

HMGB3P22-202, Transcript of high mobility group box 3 pseudogene 22, humanhuman

BASIC

Gene HMGB3P22, Length 572 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-202ENST00000451823 NFIAQ12857 509 aa5.73□□□□□ -1.49
HMGB3P22-202ENST00000451823 PDE12Q6L8Q7 609 aaKnown RBP5.73□□□□□ -1.49
HMGB3P22-202ENST00000451823 EDEM1Q92611 657 aa5.73□□□□□ -1.49
HMGB3P22-202ENST00000451823 UTP4Q969X6 686 aaKnown RBP5.73□□□□□ -1.49
HMGB3P22-202ENST00000451823 FAM46AQ96IP4 442 aaKnown RBP5.73□□□□□ -1.49
HMGB3P22-202ENST00000451823 ZMYND15Q9H091 742 aa5.73□□□□□ -1.49
HMGB3P22-202ENST00000451823 A6NHS1 94 aa5.72□□□□□ -1.49
HMGB3P22-202ENST00000451823 NFKBIEO00221 500 aa5.72□□□□□ -1.49
HMGB3P22-202ENST00000451823 ADAM11O75078 769 aa5.72□□□□□ -1.49
HMGB3P22-202ENST00000451823 NEFLP07196 543 aa5.72□□□□□ -1.49
HMGB3P22-202ENST00000451823 ACPPP15309 386 aa5.72□□□□□ -1.49
HMGB3P22-202ENST00000451823 ATP2B4P23634 1241 aa5.72□□□□□ -1.49
HMGB3P22-202ENST00000451823 C8orf34Q49A92 452 aa5.72□□□□□ -1.49
HMGB3P22-202ENST00000451823 XKR5Q6UX68 686 aa5.72□□□□□ -1.49
HMGB3P22-202ENST00000451823 TTC16Q8NEE8 873 aa5.72□□□□□ -1.49
HMGB3P22-202ENST00000451823 UBASH3BQ8TF42 649 aa5.72□□□□□ -1.49
HMGB3P22-202ENST00000451823 FOXD4L4Q8WXT5 416 aaPredicted RBP5.72□□□□□ -1.49
HMGB3P22-202ENST00000451823 SLC7A3Q8WY07 619 aa5.72□□□□□ -1.49
HMGB3P22-202ENST00000451823 KRTAP4-12Q9BQ66 201 aa5.72□□□□□ -1.49
HMGB3P22-202ENST00000451823 KCNF1Q9H3M0 494 aa5.72□□□□□ -1.49
HMGB3P22-202ENST00000451823 C7orf69Q9H7B7 122 aa5.72□□□□□ -1.49
HMGB3P22-202ENST00000451823 COL17A1Q9UMD9 1497 aaPredicted RBP5.71□□□□□ -1.49
HMGB3P22-202ENST00000451823 KDM5BQ9UGL1 1544 aa5.71□□□□□ -1.5
HMGB3P22-202ENST00000451823 BMP3P12645 472 aa5.71□□□□□ -1.5
HMGB3P22-202ENST00000451823 CABP4P57796 275 aa5.71□□□□□ -1.5
HMGB3P22-202ENST00000451823 DDX10Q13206 875 aaKnown RBP5.71□□□□□ -1.5
HMGB3P22-202ENST00000451823 NOM1Q5C9Z4 860 aaKnown RBP5.71□□□□□ -1.5
HMGB3P22-202ENST00000451823 HGSNATQ68CP4 663 aa5.71□□□□□ -1.5
HMGB3P22-202ENST00000451823 RNF43Q68DV7 783 aa5.71□□□□□ -1.5
HMGB3P22-202ENST00000451823 MCTP1Q6DN14 999 aa5.71□□□□□ -1.5
HMGB3P22-202ENST00000451823 CLEC10AQ8IUN9 316 aa5.71□□□□□ -1.5
HMGB3P22-202ENST00000451823 PBXIP1Q96AQ6 731 aa5.71□□□□□ -1.5
HMGB3P22-202ENST00000451823 FAM83CQ9BQN1 747 aa5.71□□□□□ -1.5
HMGB3P22-202ENST00000451823 DZANK1Q9NVP4 752 aa5.71□□□□□ -1.5
HMGB3P22-202ENST00000451823 CFAP43Q8NDM7 1665 aa5.71□□□□□ -1.5
HMGB3P22-202ENST00000451823 PRR19A6NJB7 356 aa5.7□□□□□ -1.5
HMGB3P22-202ENST00000451823 PDE2AO00408 941 aaPredicted RBP5.7□□□□□ -1.5
HMGB3P22-202ENST00000451823 ADAMTS4O75173 837 aa5.7□□□□□ -1.5
HMGB3P22-202ENST00000451823 RPLP1P05386 114 aaKnown RBP5.7□□□□□ -1.5
HMGB3P22-202ENST00000451823 PCSK2P16519 638 aa5.7□□□□□ -1.5
HMGB3P22-202ENST00000451823 ARL4DP49703 201 aa5.7□□□□□ -1.5
HMGB3P22-202ENST00000451823 NLRP12P59046 1061 aa5.7□□□□□ -1.5
HMGB3P22-202ENST00000451823 ZDHHC13Q8IUH4 622 aa5.7□□□□□ -1.5
HMGB3P22-202ENST00000451823 FAM20CQ8IXL6 584 aa5.7□□□□□ -1.5
HMGB3P22-202ENST00000451823 PMEPA1Q969W9 287 aa5.7□□□□□ -1.5
HMGB3P22-202ENST00000451823 MYRFLQ96LU7 910 aa5.7□□□□□ -1.5
HMGB3P22-202ENST00000451823 OSGEPQ9NPF4 335 aa5.7□□□□□ -1.5
HMGB3P22-202ENST00000451823 LRRC9Q6ZRR7 1453 aa5.7□□□□□ -1.5
HMGB3P22-202ENST00000451823 H3BRJ5 948 aa5.69□□□□□ -1.5
HMGB3P22-202ENST00000451823 SOX1O00570 391 aaPredicted RBP5.69□□□□□ -1.5
HMGB3P22-202ENST00000451823 TAL1P17542 331 aaPredicted RBP5.69□□□□□ -1.5
HMGB3P22-202ENST00000451823 IRAK1P51617 712 aa5.69□□□□□ -1.5
HMGB3P22-202ENST00000451823 GP2P55259 537 aaKnown RBP5.69□□□□□ -1.5
HMGB3P22-202ENST00000451823 PIP4K2BP78356 416 aa5.69□□□□□ -1.5
HMGB3P22-202ENST00000451823 AAMPQ13685 434 aa5.69□□□□□ -1.5
HMGB3P22-202ENST00000451823 UVSSAQ2YD98 709 aa5.69□□□□□ -1.5
HMGB3P22-202ENST00000451823 LCE3BQ5TA77 95 aa5.69□□□□□ -1.5
HMGB3P22-202ENST00000451823 BEND4Q6ZU67 534 aa5.69□□□□□ -1.5
HMGB3P22-202ENST00000451823 C14orf37Q86TY3 774 aa5.69□□□□□ -1.5
HMGB3P22-202ENST00000451823 WNT8BQ93098 351 aa5.69□□□□□ -1.5
HMGB3P22-202ENST00000451823 HHIPQ96QV1 700 aa5.69□□□□□ -1.5
HMGB3P22-202ENST00000451823 OAS3Q9Y6K5 1087 aaKnown RBP5.69□□□□□ -1.5
HMGB3P22-202ENST00000451823 CUX1P39880 1505 aa5.69□□□□□ -1.5
HMGB3P22-202ENST00000451823 KIF27Q86VH2 1401 aa5.68□□□□□ -1.5
HMGB3P22-202ENST00000451823 ANP32CO43423 234 aa5.68□□□□□ -1.5
HMGB3P22-202ENST00000451823 PDGFAP04085 211 aa5.68□□□□□ -1.5
HMGB3P22-202ENST00000451823 ITGAEP38570 1179 aa5.68□□□□□ -1.5
HMGB3P22-202ENST00000451823 INTS5Q6P9B9 1019 aaKnown RBP5.68□□□□□ -1.5
HMGB3P22-202ENST00000451823 C12orf50Q8NA57 414 aaPredicted RBP5.68□□□□□ -1.5
HMGB3P22-202ENST00000451823 NXPE3Q969Y0 559 aa5.68□□□□□ -1.5
HMGB3P22-202ENST00000451823 CCDC97Q96F63 343 aaPredicted RBP5.68□□□□□ -1.5
HMGB3P22-202ENST00000451823 OSMRQ99650 979 aa5.68□□□□□ -1.5
HMGB3P22-202ENST00000451823 DBNDD2Q9BQY9 259 aa5.68□□□□□ -1.5
HMGB3P22-202ENST00000451823 RUSC1Q9BVN2 902 aa5.68□□□□□ -1.5
HMGB3P22-202ENST00000451823 RNF208Q9H0X6 261 aa5.68□□□□□ -1.5
HMGB3P22-202ENST00000451823 SERPINA10Q9UK55 444 aa5.68□□□□□ -1.5
HMGB3P22-202ENST00000451823 NCAPD3P42695 1498 aa5.68□□□□□ -1.5
HMGB3P22-202ENST00000451823 NCOA2Q15596 1464 aa5.68□□□□□ -1.5
HMGB3P22-202ENST00000451823 PHLDB1Q86UU1 1377 aa5.67□□□□□ -1.5
HMGB3P22-202ENST00000451823 FHAD1B1AJZ9 1412 aa5.67□□□□□ -1.5
HMGB3P22-202ENST00000451823 WDR64B1ANS9 1081 aa5.67□□□□□ -1.5
HMGB3P22-202ENST00000451823 PAX4O43316 350 aa5.67□□□□□ -1.5
HMGB3P22-202ENST00000451823 MZF1P28698 734 aaPredicted RBP5.67□□□□□ -1.5
HMGB3P22-202ENST00000451823 GRIK1P39086 918 aa5.67□□□□□ -1.5
HMGB3P22-202ENST00000451823 EIF1AXP47813 144 aaKnown RBP5.67□□□□□ -1.5
HMGB3P22-202ENST00000451823 PREPP48147 710 aa5.67□□□□□ -1.5
HMGB3P22-202ENST00000451823 C19orf57Q0VDD7 668 aa5.67□□□□□ -1.5
HMGB3P22-202ENST00000451823 SHKBP1Q8TBC3 707 aa5.67□□□□□ -1.5
HMGB3P22-202ENST00000451823 GTF3C2Q8WUA4 911 aaPredicted RBP5.67□□□□□ -1.5
HMGB3P22-202ENST00000451823 SIN3AQ96ST3 1273 aa5.67□□□□□ -1.5
HMGB3P22-202ENST00000451823 CHRDQ9H2X0 955 aa5.67□□□□□ -1.5
HMGB3P22-202ENST00000451823 GOLGA2P5Q9HBQ8 144 aa5.67□□□□□ -1.5
HMGB3P22-202ENST00000451823 POLIQ9UNA4 740 aa5.67□□□□□ -1.5
HMGB3P22-202ENST00000451823 CDK11AQ9UQ88 783 aaPredicted RBP5.67□□□□□ -1.5
HMGB3P22-202ENST00000451823 MEGF11A6BM72 1044 aa5.66□□□□□ -1.5
HMGB3P22-202ENST00000451823 ARID3CA6NKF2 412 aa5.66□□□□□ -1.5
HMGB3P22-202ENST00000451823 KIAA1324LA8MWY0 1029 aaPredicted RBP5.66□□□□□ -1.5
HMGB3P22-202ENST00000451823 EREGO14944 169 aa5.66□□□□□ -1.5
HMGB3P22-202ENST00000451823 WNT11O96014 354 aa5.66□□□□□ -1.5
HMGB3P22-202ENST00000451823 MPSTP25325 297 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms