RNA–Protein interactions for RNA: ENST00000449971.5

FAM3A-216, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 1,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-216ENST00000449971 ANGEL1Q9UNK9 670 aaKnown RBP22.12■■□□□ 1.13
FAM3A-216ENST00000449971 MED23Q9ULK4 1368 aa22.12■■□□□ 1.13
FAM3A-216ENST00000449971 CT47B1P0C2W7 299 aaPredicted RBP22.11■■□□□ 1.13
FAM3A-216ENST00000449971 CCT4P50991 539 aaKnown RBP22.11■■□□□ 1.13
FAM3A-216ENST00000449971 IFIT5Q13325 482 aaKnown RBP22.11■■□□□ 1.13
FAM3A-216ENST00000449971 EPHA10Q5JZY3 1008 aa22.11■■□□□ 1.13
FAM3A-216ENST00000449971 TXNRD3Q86VQ6 643 aa22.1■■□□□ 1.13
FAM3A-216ENST00000449971 TRIM17Q9Y577 477 aa22.1■■□□□ 1.13
FAM3A-216ENST00000449971 SPEF2Q9C093 1822 aa22.09■■□□□ 1.13
FAM3A-216ENST00000449971 STRIP1Q5VSL9 837 aa22.09■■□□□ 1.13
FAM3A-216ENST00000449971 TTLL5Q6EMB2 1281 aa22.09■■□□□ 1.13
FAM3A-216ENST00000449971 APOBEC3FQ8IUX4 373 aaKnown RBP22.09■■□□□ 1.13
FAM3A-216ENST00000449971 ANKRD2Q9GZV1 360 aa22.09■■□□□ 1.13
FAM3A-216ENST00000449971 CENPFP49454 3210 aa22.08■■□□□ 1.13
FAM3A-216ENST00000449971 MYO3BQ8WXR4 1341 aa22.08■■□□□ 1.13
FAM3A-216ENST00000449971 NBPF7P0C2Y1 421 aaPredicted RBP22.08■■□□□ 1.13
FAM3A-216ENST00000449971 KLRK1P26718 216 aa22.08■■□□□ 1.13
FAM3A-216ENST00000449971 HNRNPUQ00839 825 aaKnown RBP eCLIP22.08■■□□□ 1.13
FAM3A-216ENST00000449971 CCDC57Q2TAC2 916 aa22.08■■□□□ 1.13
FAM3A-216ENST00000449971 SPRYD7Q5W111 196 aa22.08■■□□□ 1.13
FAM3A-216ENST00000449971 SUCLG2Q96I99 432 aa22.08■■□□□ 1.13
FAM3A-216ENST00000449971 COA1Q9GZY4 146 aa22.08■■□□□ 1.13
FAM3A-216ENST00000449971 GTF2IP78347 998 aa22.07■■□□□ 1.12
FAM3A-216ENST00000449971 TAF7LQ5H9L4 462 aa22.07■■□□□ 1.12
FAM3A-216ENST00000449971 NOB1Q9ULX3 412 aaKnown RBP22.07■■□□□ 1.12
FAM3A-216ENST00000449971 LEMD3Q9Y2U8 911 aa22.07■■□□□ 1.12
FAM3A-216ENST00000449971 HTTP42858 3142 aa22.07■■□□□ 1.12
FAM3A-216ENST00000449971 NOM1Q5C9Z4 860 aaKnown RBP22.06■■□□□ 1.12
FAM3A-216ENST00000449971 SLC10A4Q96EP9 437 aa22.06■■□□□ 1.12
FAM3A-216ENST00000449971 POTEFA5A3E0 1075 aa22.05■■□□□ 1.12
FAM3A-216ENST00000449971 KCNJ4P48050 445 aa22.05■■□□□ 1.12
FAM3A-216ENST00000449971 CHRNDQ07001 517 aa22.05■■□□□ 1.12
FAM3A-216ENST00000449971 GCC1Q96CN9 775 aa22.05■■□□□ 1.12
FAM3A-216ENST00000449971 ZNF594Q96JF6 807 aaPredicted RBP22.05■■□□□ 1.12
FAM3A-216ENST00000449971 ZNF804BA4D1E1 1349 aa22.05■■□□□ 1.12
FAM3A-216ENST00000449971 UTYO14607 1347 aa22.05■■□□□ 1.12
FAM3A-216ENST00000449971 MYH3P11055 1940 aa22.04■■□□□ 1.12
FAM3A-216ENST00000449971 RARSP54136 660 aaKnown RBP22.04■■□□□ 1.12
FAM3A-216ENST00000449971 HELBQ8NG08 1087 aaPredicted RBP22.04■■□□□ 1.12
FAM3A-216ENST00000449971 KAZALD1Q96I82 304 aa22.04■■□□□ 1.12
FAM3A-216ENST00000449971 CLMNQ96JQ2 1002 aa22.04■■□□□ 1.12
FAM3A-216ENST00000449971 DEFB129Q9H1M3 183 aa22.04■■□□□ 1.12
FAM3A-216ENST00000449971 MANSC4A6NHS7 340 aaPredicted RBP22.03■■□□□ 1.12
FAM3A-216ENST00000449971 F8W031 263 aaPredicted RBP22.03■■□□□ 1.12
FAM3A-216ENST00000449971 ALDH1A1P00352 501 aa22.03■■□□□ 1.12
FAM3A-216ENST00000449971 DLGAP5Q15398 846 aa22.03■■□□□ 1.12
FAM3A-216ENST00000449971 LDLRAD1Q5T700 205 aa22.03■■□□□ 1.12
FAM3A-216ENST00000449971 LDHAL6AQ6ZMR3 332 aa22.03■■□□□ 1.12
FAM3A-216ENST00000449971 OTOP1Q7RTM1 612 aa22.03■■□□□ 1.12
FAM3A-216ENST00000449971 IFNL1Q8IU54 200 aa22.03■■□□□ 1.12
FAM3A-216ENST00000449971 TAF5LO75529 589 aa22.02■■□□□ 1.12
FAM3A-216ENST00000449971 CFHR5Q9BXR6 569 aa22.02■■□□□ 1.12
FAM3A-216ENST00000449971 API5Q9BZZ5 524 aaKnown RBP22.02■■□□□ 1.12
FAM3A-216ENST00000449971 USP44Q9H0E7 712 aa22.02■■□□□ 1.12
FAM3A-216ENST00000449971 BICC1Q9H694 974 aaKnown RBP22.02■■□□□ 1.12
FAM3A-216ENST00000449971 CNNM1Q9NRU3 951 aa22.02■■□□□ 1.12
FAM3A-216ENST00000449971 PCDHAC2Q9Y5I4 1007 aa22.02■■□□□ 1.12
FAM3A-216ENST00000449971 CLRN2A0PK11 232 aa22.01■■□□□ 1.11
FAM3A-216ENST00000449971 PLIN1O60240 522 aa22.01■■□□□ 1.11
FAM3A-216ENST00000449971 CD99L2Q8TCZ2 262 aa22.01■■□□□ 1.11
FAM3A-216ENST00000449971 WNK4Q96J92 1243 aa22.01■■□□□ 1.11
FAM3A-216ENST00000449971 SNAP23O00161 211 aa22■■□□□ 1.11
FAM3A-216ENST00000449971 IGF2BP3O00425 579 aaKnown RBP eCLIP22■■□□□ 1.11
FAM3A-216ENST00000449971 PPP1R12BO60237 982 aaPredicted RBP22■■□□□ 1.11
FAM3A-216ENST00000449971 HABP4Q5JVS0 413 aaKnown RBP22■■□□□ 1.11
FAM3A-216ENST00000449971 VEZTQ9HBM0 779 aa22■■□□□ 1.11
FAM3A-216ENST00000449971 JAG2Q9Y219 1238 aa22■■□□□ 1.11
FAM3A-216ENST00000449971 KIAA0100Q14667 2235 aaKnown RBP21.99■■□□□ 1.11
FAM3A-216ENST00000449971 ZNF646O15015 1829 aaPredicted RBP21.99■■□□□ 1.11
FAM3A-216ENST00000449971 BRCA2P51587 3418 aa21.98■■□□□ 1.11
FAM3A-216ENST00000449971 RABL6Q3YEC7 729 aaPredicted RBP21.98■■□□□ 1.11
FAM3A-216ENST00000449971 ANKRD44Q8N8A2 993 aa21.98■■□□□ 1.11
FAM3A-216ENST00000449971 ZBED3Q96IU2 234 aaPredicted RBP21.98■■□□□ 1.11
FAM3A-216ENST00000449971 CD209Q9NNX6 404 aa21.98■■□□□ 1.11
FAM3A-216ENST00000449971 EN2P19622 333 aaPredicted RBP21.97■■□□□ 1.11
FAM3A-216ENST00000449971 INHBEP58166 350 aa21.97■■□□□ 1.11
FAM3A-216ENST00000449971 INTS3Q68E01 1043 aaKnown RBP21.97■■□□□ 1.11
FAM3A-216ENST00000449971 CERS5Q8N5B7 392 aa21.97■■□□□ 1.11
FAM3A-216ENST00000449971 ERO1AQ96HE7 468 aa21.97■■□□□ 1.11
FAM3A-216ENST00000449971 PUS3Q9BZE2 481 aaKnown RBP21.97■■□□□ 1.11
FAM3A-216ENST00000449971 ZBTB48P10074 688 aaPredicted RBP21.96■■□□□ 1.11
FAM3A-216ENST00000449971 MMP14P50281 582 aa21.96■■□□□ 1.11
FAM3A-216ENST00000449971 RBM5P52756 815 aaKnown RBP eCLIP21.96■■□□□ 1.11
FAM3A-216ENST00000449971 CRHR2Q13324 411 aa21.96■■□□□ 1.11
FAM3A-216ENST00000449971 CFAP100Q494V2 611 aa21.96■■□□□ 1.11
FAM3A-216ENST00000449971 KIF16BQ96L93 1317 aa21.96■■□□□ 1.11
FAM3A-216ENST00000449971 SSC5DA1L4H1 1573 aa21.95■■□□□ 1.11
FAM3A-216ENST00000449971 MYO1BO43795 1136 aa21.95■■□□□ 1.1
FAM3A-216ENST00000449971 GJA5P36382 358 aa21.95■■□□□ 1.1
FAM3A-216ENST00000449971 NBPF12Q5TAG4 269 aaPredicted RBP21.95■■□□□ 1.1
FAM3A-216ENST00000449971 ARHGAP45Q92619 1136 aa21.95■■□□□ 1.1
FAM3A-216ENST00000449971 EFCC1Q9HA90 598 aa21.95■■□□□ 1.1
FAM3A-216ENST00000449971 PTPN22Q9Y2R2 807 aa21.95■■□□□ 1.1
FAM3A-216ENST00000449971 IPO8O15397 1037 aaKnown RBP21.94■■□□□ 1.1
FAM3A-216ENST00000449971 BCAR3O75815 825 aa21.94■■□□□ 1.1
FAM3A-216ENST00000449971 UBTFL1P0CB47 393 aaPredicted RBP21.94■■□□□ 1.1
FAM3A-216ENST00000449971 SUPT20HL1Q3ZLR7 823 aa21.94■■□□□ 1.1
FAM3A-216ENST00000449971 OTUD7BQ6GQQ9 843 aa21.94■■□□□ 1.1
FAM3A-216ENST00000449971 FRAT1Q92837 279 aaPredicted RBP21.94■■□□□ 1.1
FAM3A-216ENST00000449971 AOX1Q06278 1338 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms