RNA–Protein interactions for RNA: ENST00000449943.5

SYVN1-204, Transcript of synoviolin 1, humanhuman

TSL 2

Gene SYVN1, Length 4,547 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-204ENST00000449943 CCDC57Q2TAC2 916 aa13.2□□□□□ -0.3
SYVN1-204ENST00000449943 CCDC158Q5M9N0 1113 aa13.2□□□□□ -0.3
SYVN1-204ENST00000449943 PI16Q6UXB8 463 aa13.2□□□□□ -0.3
SYVN1-204ENST00000449943 TOMM22Q9NS69 142 aa13.2□□□□□ -0.3
SYVN1-204ENST00000449943 FDPSP14324 419 aaKnown RBP13.19□□□□□ -0.3
SYVN1-204ENST00000449943 NDUFA8P51970 172 aa13.19□□□□□ -0.3
SYVN1-204ENST00000449943 NCBP1Q09161 790 aaKnown RBP13.19□□□□□ -0.3
SYVN1-204ENST00000449943 ISM2Q6H9L7 571 aa13.19□□□□□ -0.3
SYVN1-204ENST00000449943 ZHX1Q9UKY1 873 aaPredicted RBP13.19□□□□□ -0.3
SYVN1-204ENST00000449943 PRC1O43663 620 aa13.19□□□□□ -0.3
SYVN1-204ENST00000449943 SMC2O95347 1197 aa13.19□□□□□ -0.3
SYVN1-204ENST00000449943 IMMTQ16891 758 aaKnown RBP13.19□□□□□ -0.3
SYVN1-204ENST00000449943 ZNF274Q96GC6 653 aaPredicted RBP13.19□□□□□ -0.3
SYVN1-204ENST00000449943 ORC3Q9UBD5 711 aaPredicted RBP13.19□□□□□ -0.3
SYVN1-204ENST00000449943 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.19□□□□□ -0.31e-8■□□□□ 11
SYVN1-204ENST00000449943 V9GYY5 206 aaPredicted RBP13.19□□□□□ -0.3
SYVN1-204ENST00000449943 CDC25BP30305 580 aa13.18□□□□□ -0.3
SYVN1-204ENST00000449943 ENGASEQ8NFI3 743 aa13.18□□□□□ -0.3
SYVN1-204ENST00000449943 CTIFO43310 598 aaKnown RBP13.18□□□□□ -0.3
SYVN1-204ENST00000449943 RALYLQ86SE5 291 aaKnown RBP13.18□□□□□ -0.3
SYVN1-204ENST00000449943 MRFAP1L1Q96HT8 127 aa13.18□□□□□ -0.3
SYVN1-204ENST00000449943 NAT10Q9H0A0 1025 aaKnown RBP13.18□□□□□ -0.3
SYVN1-204ENST00000449943 SALL1Q9NSC2 1324 aa13.18□□□□□ -0.3
SYVN1-204ENST00000449943 SCARF1Q14162 830 aa13.18□□□□□ -0.3
SYVN1-204ENST00000449943 SARM1Q6SZW1 724 aa13.18□□□□□ -0.3
SYVN1-204ENST00000449943 ANKRD7Q92527 254 aa13.18□□□□□ -0.3
SYVN1-204ENST00000449943 XAGE2Q96GT9 111 aa13.18□□□□□ -0.3
SYVN1-204ENST00000449943 CAMTA1Q9Y6Y1 1673 aa13.18□□□□□ -0.3
SYVN1-204ENST00000449943 AGXT2Q9BYV1 514 aa13.18□□□□□ -0.3
SYVN1-204ENST00000449943 G3V3G9 751 aa13.17□□□□□ -0.3
SYVN1-204ENST00000449943 ZAP70P43403 619 aa13.17□□□□□ -0.3
SYVN1-204ENST00000449943 PTPN14Q15678 1187 aa13.17□□□□□ -0.3
SYVN1-204ENST00000449943 DPCR1Q3MIW9 517 aa13.17□□□□□ -0.3
SYVN1-204ENST00000449943 DCAF8Q5TAQ9 597 aa13.17□□□□□ -0.3
SYVN1-204ENST00000449943 GPR108Q9NPR9 543 aa13.17□□□□□ -0.3
SYVN1-204ENST00000449943 SCN11AQ9UI33 1791 aa13.17□□□□□ -0.3
SYVN1-204ENST00000449943 NRDCO43847 1150 aa13.17□□□□□ -0.3
SYVN1-204ENST00000449943 FGAP02671 866 aa13.17□□□□□ -0.3
SYVN1-204ENST00000449943 RXRAP19793 462 aa13.17□□□□□ -0.3
SYVN1-204ENST00000449943 SYNE3Q6ZMZ3 975 aa13.17□□□□□ -0.3
SYVN1-204ENST00000449943 FMR1NBQ8N0W7 255 aaPredicted RBP13.17□□□□□ -0.3
SYVN1-204ENST00000449943 FAM89AQ96GI7 184 aa13.17□□□□□ -0.3
SYVN1-204ENST00000449943 PUS7LQ9H0K6 701 aaKnown RBP13.17□□□□□ -0.3
SYVN1-204ENST00000449943 CTNNA3Q9UI47 895 aa13.17□□□□□ -0.3
SYVN1-204ENST00000449943 ADAMTS7Q9UKP4 1686 aa13.16□□□□□ -0.3
SYVN1-204ENST00000449943 CCDC191Q8NCU4 936 aa13.16□□□□□ -0.3
SYVN1-204ENST00000449943 PAXBP1Q9Y5B6 917 aa13.16□□□□□ -0.3
SYVN1-204ENST00000449943 MARCKSP29966 332 aaPredicted RBP13.16□□□□□ -0.3
SYVN1-204ENST00000449943 ARFGEF2Q9Y6D5 1785 aa13.16□□□□□ -0.3
SYVN1-204ENST00000449943 SPTLC2O15270 562 aa13.16□□□□□ -0.3
SYVN1-204ENST00000449943 IGSF3O75054 1194 aa13.16□□□□□ -0.3
SYVN1-204ENST00000449943 APPP05067 770 aa13.16□□□□□ -0.3
SYVN1-204ENST00000449943 ATL3Q6DD88 541 aa13.16□□□□□ -0.3
SYVN1-204ENST00000449943 LINC00301Q8NCQ3 95 aa13.16□□□□□ -0.3
SYVN1-204ENST00000449943 RTEL1Q9NZ71 1219 aa13.16□□□□□ -0.3
SYVN1-204ENST00000449943 PRDM4Q9UKN5 801 aa13.16□□□□□ -0.3
SYVN1-204ENST00000449943 TRPM3Q9HCF6 1732 aaPredicted RBP13.16□□□□□ -0.3
SYVN1-204ENST00000449943 NUTM2BA6NNL0 878 aaPredicted RBP13.16□□□□□ -0.3
SYVN1-204ENST00000449943 NUTM2EB1AL46 878 aaPredicted RBP13.16□□□□□ -0.3
SYVN1-204ENST00000449943 ADALQ6DHV7 355 aa13.16□□□□□ -0.3
SYVN1-204ENST00000449943 NUTM2AQ8IVF1 878 aaPredicted RBP13.16□□□□□ -0.3
SYVN1-204ENST00000449943 CPLX2Q6PUV4 134 aaKnown RBP13.15□□□□□ -0.3
SYVN1-204ENST00000449943 TMC6Q7Z403 805 aa13.15□□□□□ -0.3
SYVN1-204ENST00000449943 VPS37DQ86XT2 251 aa13.15□□□□□ -0.3
SYVN1-204ENST00000449943 ZCRB1Q8TBF4 217 aaKnown RBP13.15□□□□□ -0.3
SYVN1-204ENST00000449943 KIF28PB7ZC32 967 aa13.15□□□□□ -0.3
SYVN1-204ENST00000449943 ZNF213O14771 459 aa13.15□□□□□ -0.3
SYVN1-204ENST00000449943 AIFM3Q96NN9 605 aa13.15□□□□□ -0.3
SYVN1-204ENST00000449943 IFNKQ9P0W0 207 aa13.15□□□□□ -0.3
SYVN1-204ENST00000449943 DENND2AQ9ULE3 1009 aa13.15□□□□□ -0.3
SYVN1-204ENST00000449943 DHX16O60231 1041 aaKnown RBP13.15□□□□□ -0.3
SYVN1-204ENST00000449943 NEMFO60524 1076 aa13.14□□□□□ -0.31
SYVN1-204ENST00000449943 SLC3A2P08195 630 aaKnown RBP13.14□□□□□ -0.31
SYVN1-204ENST00000449943 CCZ1BP86790 482 aa13.14□□□□□ -0.31
SYVN1-204ENST00000449943 CCZ1P86791 482 aaPredicted RBP13.14□□□□□ -0.31
SYVN1-204ENST00000449943 MYSM1Q5VVJ2 828 aa13.14□□□□□ -0.31
SYVN1-204ENST00000449943 NCOA7Q8NI08 942 aa13.14□□□□□ -0.31
SYVN1-204ENST00000449943 KIAA1468Q9P260 1216 aa13.14□□□□□ -0.31
SYVN1-204ENST00000449943 FOXP2O15409 715 aa13.14□□□□□ -0.31
SYVN1-204ENST00000449943 TRDNQ13061 729 aa13.14□□□□□ -0.31
SYVN1-204ENST00000449943 KCNG4Q8TDN1 519 aa13.14□□□□□ -0.31
SYVN1-204ENST00000449943 XPO4Q9C0E2 1151 aaKnown RBP13.14□□□□□ -0.31
SYVN1-204ENST00000449943 GPAA1O43292 621 aa13.14□□□□□ -0.31
SYVN1-204ENST00000449943 ZSCAN20P17040 1043 aaPredicted RBP13.14□□□□□ -0.31
SYVN1-204ENST00000449943 SYNE4Q8N205 404 aa13.14□□□□□ -0.31
SYVN1-204ENST00000449943 FBXO18Q8NFZ0 1043 aa13.14□□□□□ -0.31
SYVN1-204ENST00000449943 CIAO1O76071 339 aa13.14□□□□□ -0.31
SYVN1-204ENST00000449943 STARD3NLO95772 234 aa13.14□□□□□ -0.31
SYVN1-204ENST00000449943 GPTP24298 496 aa13.14□□□□□ -0.31
SYVN1-204ENST00000449943 ANTXR2P58335 489 aa13.14□□□□□ -0.31
SYVN1-204ENST00000449943 HPS5Q9UPZ3 1129 aa13.14□□□□□ -0.31
SYVN1-204ENST00000449943 AKAP2Q9Y2D5 859 aa13.14□□□□□ -0.31
SYVN1-204ENST00000449943 LMTK3Q96Q04 1460 aa13.14□□□□□ -0.31
SYVN1-204ENST00000449943 METTL24Q5JXM2 366 aa13.13□□□□□ -0.31
SYVN1-204ENST00000449943 ZNF202O95125 648 aa13.13□□□□□ -0.31
SYVN1-204ENST00000449943 MB21D2Q8IYB1 491 aaPredicted RBP13.13□□□□□ -0.31
SYVN1-204ENST00000449943 ZNF215Q9UL58 517 aaPredicted RBP13.13□□□□□ -0.31
SYVN1-204ENST00000449943 IDH1O75874 414 aaKnown RBP13.13□□□□□ -0.31
SYVN1-204ENST00000449943 LMOD1P29536 600 aaPredicted RBP13.13□□□□□ -0.31
SYVN1-204ENST00000449943 IFIT5Q13325 482 aaKnown RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms