RNA–Protein interactions for RNA: ENST00000449600.1

NPHP1-208, Transcript of nephrocystin 1, humanhuman

TSL 3

Gene NPHP1, Length 486 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-208ENST00000449600 CHL1O00533 1208 aa10.37□□□□□ -0.75
NPHP1-208ENST00000449600 IPO8O15397 1037 aaKnown RBP10.37□□□□□ -0.75
NPHP1-208ENST00000449600 ZNF853P0CG23 659 aa10.37□□□□□ -0.75
NPHP1-208ENST00000449600 CST9Q5W186 159 aa10.37□□□□□ -0.75
NPHP1-208ENST00000449600 MBIPQ9NS73 344 aa10.37□□□□□ -0.75
NPHP1-208ENST00000449600 SMC4Q9NTJ3 1288 aa10.37□□□□□ -0.75
NPHP1-208ENST00000449600 RNF123Q5XPI4 1314 aa10.36□□□□□ -0.75
NPHP1-208ENST00000449600 RNMTO43148 476 aaKnown RBP10.36□□□□□ -0.75
NPHP1-208ENST00000449600 TWISTNBQ3B726 338 aaPredicted RBP10.36□□□□□ -0.75
NPHP1-208ENST00000449600 ALDH1L2Q3SY69 923 aa10.36□□□□□ -0.75
NPHP1-208ENST00000449600 C2CD5Q86YS7 1000 aa10.36□□□□□ -0.75
NPHP1-208ENST00000449600 HLA-CQ95604 372 aa10.36□□□□□ -0.75
NPHP1-208ENST00000449600 DLG5Q8TDM6 1919 aa10.35□□□□□ -0.75
NPHP1-208ENST00000449600 MKI67P46013 3256 aaKnown RBP10.35□□□□□ -0.75
NPHP1-208ENST00000449600 C21orf2O43822 256 aa10.35□□□□□ -0.75
NPHP1-208ENST00000449600 RARSP54136 660 aaKnown RBP10.35□□□□□ -0.75
NPHP1-208ENST00000449600 IRX6P78412 446 aaPredicted RBP10.35□□□□□ -0.75
NPHP1-208ENST00000449600 FRAT1Q92837 279 aaPredicted RBP10.35□□□□□ -0.75
NPHP1-208ENST00000449600 KIFC2Q96AC6 838 aa10.35□□□□□ -0.75
NPHP1-208ENST00000449600 SOS1Q07889 1333 aaPredicted RBP10.34□□□□□ -0.75
NPHP1-208ENST00000449600 KIF16BQ96L93 1317 aa10.34□□□□□ -0.75
NPHP1-208ENST00000449600 MYH14Q7Z406 1995 aaKnown RBP10.34□□□□□ -0.75
NPHP1-208ENST00000449600 BTBD11A6QL63 1104 aa10.34□□□□□ -0.75
NPHP1-208ENST00000449600 KDM4AO75164 1064 aa10.34□□□□□ -0.75
NPHP1-208ENST00000449600 PHKG2P15735 406 aa10.34□□□□□ -0.75
NPHP1-208ENST00000449600 WNT7BP56706 349 aa10.34□□□□□ -0.75
NPHP1-208ENST00000449600 GRM1Q13255 1194 aa10.34□□□□□ -0.75
NPHP1-208ENST00000449600 SAPCD2Q86UD0 394 aa10.34□□□□□ -0.75
NPHP1-208ENST00000449600 IL17REQ8NFR9 667 aa10.34□□□□□ -0.75
NPHP1-208ENST00000449600 SAGE1Q9NXZ1 904 aa10.34□□□□□ -0.75
NPHP1-208ENST00000449600 BCAR3O75815 825 aa10.33□□□□□ -0.76
NPHP1-208ENST00000449600 CRKLP46109 303 aaKnown RBP10.33□□□□□ -0.76
NPHP1-208ENST00000449600 CABP4P57796 275 aa10.33□□□□□ -0.76
NPHP1-208ENST00000449600 PLCB2Q00722 1185 aa10.33□□□□□ -0.76
NPHP1-208ENST00000449600 NFIXQ14938 502 aa10.33□□□□□ -0.76
NPHP1-208ENST00000449600 SOGA3Q5TF21 947 aa10.33□□□□□ -0.76
NPHP1-208ENST00000449600 ZKSCAN2Q63HK3 967 aa10.33□□□□□ -0.76
NPHP1-208ENST00000449600 GPIHBP1Q8IV16 184 aa10.33□□□□□ -0.76
NPHP1-208ENST00000449600 FTSJ3Q8IY81 847 aaKnown RBP10.33□□□□□ -0.76
NPHP1-208ENST00000449600 STK31Q9BXU1 1019 aa10.33□□□□□ -0.76
NPHP1-208ENST00000449600 PPP4R2Q9NY27 417 aa10.33□□□□□ -0.76
NPHP1-208ENST00000449600 ELL2O00472 640 aaPredicted RBP10.32□□□□□ -0.76
NPHP1-208ENST00000449600 PLIN1O60240 522 aa10.32□□□□□ -0.76
NPHP1-208ENST00000449600 SERPINB2P05120 415 aa10.32□□□□□ -0.76
NPHP1-208ENST00000449600 PDE3AQ14432 1141 aa10.32□□□□□ -0.76
NPHP1-208ENST00000449600 CIAPIN1Q6FI81 312 aa10.32□□□□□ -0.76
NPHP1-208ENST00000449600 TTC5Q8N0Z6 440 aa10.32□□□□□ -0.76
NPHP1-208ENST00000449600 LGR6Q9HBX8 967 aa10.32□□□□□ -0.76
NPHP1-208ENST00000449600 ZNF541Q9H0D2 1346 aa10.32□□□□□ -0.76
NPHP1-208ENST00000449600 AFDNP55196 1824 aaKnown RBP10.31□□□□□ -0.76
NPHP1-208ENST00000449600 CARMIL3Q8ND23 1372 aa10.31□□□□□ -0.76
NPHP1-208ENST00000449600 CEMIPQ8WUJ3 1361 aa10.31□□□□□ -0.76
NPHP1-208ENST00000449600 ERVV-2B6SEH9 535 aa10.31□□□□□ -0.76
NPHP1-208ENST00000449600 VAMP4O75379 141 aa10.31□□□□□ -0.76
NPHP1-208ENST00000449600 CCDC30Q5VVM6 783 aa10.31□□□□□ -0.76
NPHP1-208ENST00000449600 USPL1Q5W0Q7 1092 aa10.31□□□□□ -0.76
NPHP1-208ENST00000449600 BCL2L13Q9BXK5 485 aa10.31□□□□□ -0.76
NPHP1-208ENST00000449600 CHMP4BQ9H444 224 aaKnown RBP10.31□□□□□ -0.76
NPHP1-208ENST00000449600 MIS18AQ9NYP9 233 aa10.31□□□□□ -0.76
NPHP1-208ENST00000449600 PITPNM2Q9BZ72 1349 aa10.31□□□□□ -0.76
NPHP1-208ENST00000449600 HOXA2O43364 376 aa10.3□□□□□ -0.76
NPHP1-208ENST00000449600 LORP23490 312 aaPredicted RBP10.3□□□□□ -0.76
NPHP1-208ENST00000449600 FMR1Q06787 632 aaKnown RBP eCLIP10.3□□□□□ -0.76
NPHP1-208ENST00000449600 NOGQ13253 232 aa10.3□□□□□ -0.76
NPHP1-208ENST00000449600 INTS5Q6P9B9 1019 aaKnown RBP10.3□□□□□ -0.76
NPHP1-208ENST00000449600 CTU1Q7Z7A3 348 aaKnown RBP10.3□□□□□ -0.76
NPHP1-208ENST00000449600 GPC2Q8N158 579 aa10.3□□□□□ -0.76
NPHP1-208ENST00000449600 CCDC24Q8N4L8 307 aa10.3□□□□□ -0.76
NPHP1-208ENST00000449600 C8orf58Q8NAV2 365 aa10.3□□□□□ -0.76
NPHP1-208ENST00000449600 SLC17A8Q8NDX2 589 aa10.3□□□□□ -0.76
NPHP1-208ENST00000449600 SSH1Q8WYL5 1049 aa10.3□□□□□ -0.76
NPHP1-208ENST00000449600 BRIP1Q9BX63 1249 aa10.3□□□□□ -0.76
NPHP1-208ENST00000449600 SLC52A2Q9HAB3 445 aa10.3□□□□□ -0.76
NPHP1-208ENST00000449600 COL6A3P12111 3177 aa10.29□□□□□ -0.76
NPHP1-208ENST00000449600 FZD9O00144 591 aa10.29□□□□□ -0.76
NPHP1-208ENST00000449600 SIAH2O43255 324 aa10.29□□□□□ -0.76
NPHP1-208ENST00000449600 HOXB7P09629 217 aa10.29□□□□□ -0.76
NPHP1-208ENST00000449600 PDE6BP35913 854 aa10.29□□□□□ -0.76
NPHP1-208ENST00000449600 USP46P62068 366 aa10.29□□□□□ -0.76
NPHP1-208ENST00000449600 AAMPQ13685 434 aa10.29□□□□□ -0.76
NPHP1-208ENST00000449600 PKN2Q16513 984 aaKnown RBP10.29□□□□□ -0.76
NPHP1-208ENST00000449600 DZIP1LQ8IYY4 767 aaKnown RBP10.29□□□□□ -0.76
NPHP1-208ENST00000449600 CCDC136Q96JN2 1154 aa10.29□□□□□ -0.76
NPHP1-208ENST00000449600 API5Q9BZZ5 524 aaKnown RBP10.29□□□□□ -0.76
NPHP1-208ENST00000449600 NARFQ9UHQ1 456 aa10.29□□□□□ -0.76
NPHP1-208ENST00000449600 ATF7IPQ6VMQ6 1270 aa10.28□□□□□ -0.76
NPHP1-208ENST00000449600 TSPYL6Q8N831 410 aa10.28□□□□□ -0.76
NPHP1-208ENST00000449600 ARHGAP45Q92619 1136 aa10.28□□□□□ -0.76
NPHP1-208ENST00000449600 CNKSR1Q969H4 720 aa10.28□□□□□ -0.76
NPHP1-208ENST00000449600 ZNF622Q969S3 477 aaKnown RBP eCLIP10.28□□□□□ -0.76
NPHP1-208ENST00000449600 CRBNQ96SW2 442 aa10.28□□□□□ -0.76
NPHP1-208ENST00000449600 NOB1Q9ULX3 412 aaKnown RBP10.28□□□□□ -0.76
NPHP1-208ENST00000449600 TRAF5O00463 557 aa10.27□□□□□ -0.77
NPHP1-208ENST00000449600 ALDH1A1P00352 501 aa10.27□□□□□ -0.77
NPHP1-208ENST00000449600 JUNDP17535 347 aa10.27□□□□□ -0.77
NPHP1-208ENST00000449600 MAP2K5Q13163 448 aa10.27□□□□□ -0.77
NPHP1-208ENST00000449600 HDGFL1Q5TGJ6 251 aa10.27□□□□□ -0.77
NPHP1-208ENST00000449600 TRIM46Q7Z4K8 759 aa10.27□□□□□ -0.77
NPHP1-208ENST00000449600 NFATC2IPQ8NCF5 419 aa10.27□□□□□ -0.77
NPHP1-208ENST00000449600 EXOC6Q8TAG9 804 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms