RNA–Protein interactions for RNA: ENST00000449082.2

SCN10A-201, Transcript of sodium voltage-gated channel alpha subunit 10, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN10A, Length 6,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10A-201ENST00000449082 GJA3Q9Y6H8 435 aa11.6□□□□□ -0.55
SCN10A-201ENST00000449082 MAST3O60307 1309 aa11.59□□□□□ -0.55
SCN10A-201ENST00000449082 SMC1AQ14683 1233 aaKnown RBP11.59□□□□□ -0.55
SCN10A-201ENST00000449082 PUM3Q15397 648 aaKnown RBP11.59□□□□□ -0.55
SCN10A-201ENST00000449082 KRT24Q2M2I5 525 aa11.59□□□□□ -0.55
SCN10A-201ENST00000449082 BCCIPQ9P287 314 aaKnown RBP eCLIP11.59□□□□□ -0.55
SCN10A-201ENST00000449082 GGA1Q9UJY5 639 aa11.59□□□□□ -0.55
SCN10A-201ENST00000449082 PABPN1LA6NDY0 278 aaKnown RBP11.59□□□□□ -0.55
SCN10A-201ENST00000449082 HOXB7P09629 217 aa11.59□□□□□ -0.55
SCN10A-201ENST00000449082 LMAN1P49257 510 aa11.59□□□□□ -0.55
SCN10A-201ENST00000449082 FAM89AQ96GI7 184 aa11.59□□□□□ -0.55
SCN10A-201ENST00000449082 TESK2Q96S53 571 aa11.59□□□□□ -0.55
SCN10A-201ENST00000449082 GOLGA6L10A0A0M3HER8 536 aa11.59□□□□□ -0.55
SCN10A-201ENST00000449082 CARD14Q9BXL6 1004 aa11.59□□□□□ -0.55
SCN10A-201ENST00000449082 JADE2Q9NQC1 790 aa11.59□□□□□ -0.55
SCN10A-201ENST00000449082 CNPY2Q9Y2B0 182 aa11.59□□□□□ -0.55
SCN10A-201ENST00000449082 EYA2O00167 538 aa11.59□□□□□ -0.55
SCN10A-201ENST00000449082 SPTLC2O15270 562 aa11.59□□□□□ -0.55
SCN10A-201ENST00000449082 SNW1Q13573 536 aaKnown RBP11.59□□□□□ -0.55
SCN10A-201ENST00000449082 JAG2Q9Y219 1238 aa11.59□□□□□ -0.55
SCN10A-201ENST00000449082 MBD4O95243 580 aa11.59□□□□□ -0.55
SCN10A-201ENST00000449082 F13A1P00488 732 aa11.59□□□□□ -0.55
SCN10A-201ENST00000449082 GIMAP6Q6P9H5 292 aa11.59□□□□□ -0.55
SCN10A-201ENST00000449082 DDX12PQ92771 950 aa11.59□□□□□ -0.55
SCN10A-201ENST00000449082 DHX58Q96C10 678 aa11.59□□□□□ -0.55
SCN10A-201ENST00000449082 ARHGEF12Q9NZN5 1544 aa11.58□□□□□ -0.56
SCN10A-201ENST00000449082 APOBRQ0VD83 1088 aa11.58□□□□□ -0.56
SCN10A-201ENST00000449082 CERS3Q8IU89 383 aa11.58□□□□□ -0.56
SCN10A-201ENST00000449082 PICK1Q9NRD5 415 aa11.58□□□□□ -0.56
SCN10A-201ENST00000449082 FSD2A1L4K1 749 aa11.58□□□□□ -0.56
SCN10A-201ENST00000449082 TSNARE1Q96NA8 513 aa11.58□□□□□ -0.56
SCN10A-201ENST00000449082 KIAA0753Q2KHM9 967 aa11.58□□□□□ -0.56
SCN10A-201ENST00000449082 CHST3Q7LGC8 479 aa11.58□□□□□ -0.56
SCN10A-201ENST00000449082 C16orf45Q96MC5 204 aaPredicted RBP11.58□□□□□ -0.56
SCN10A-201ENST00000449082 ORAI2Q96SN7 254 aa11.58□□□□□ -0.56
SCN10A-201ENST00000449082 MAST1Q9Y2H9 1570 aa11.58□□□□□ -0.56
SCN10A-201ENST00000449082 BICDL2A1A5D9 508 aa11.58□□□□□ -0.56
SCN10A-201ENST00000449082 KIF4AO95239 1232 aa11.58□□□□□ -0.56
SCN10A-201ENST00000449082 GIGYF2Q6Y7W6 1299 aaKnown RBP11.58□□□□□ -0.56
SCN10A-201ENST00000449082 HS2ST1Q7LGA3 356 aa11.58□□□□□ -0.56
SCN10A-201ENST00000449082 SLC52A2Q9HAB3 445 aa11.58□□□□□ -0.56
SCN10A-201ENST00000449082 CCDC87Q9NVE4 849 aa11.58□□□□□ -0.56
SCN10A-201ENST00000449082 MRVI1Q9Y6F6 885 aa11.58□□□□□ -0.56
SCN10A-201ENST00000449082 H0YIN7 160 aa11.57□□□□□ -0.56
SCN10A-201ENST00000449082 PRPHP41219 470 aa11.57□□□□□ -0.56
SCN10A-201ENST00000449082 DTHD1Q6ZMT9 781 aa11.57□□□□□ -0.56
SCN10A-201ENST00000449082 TMOD4Q9NZQ9 345 aa11.57□□□□□ -0.56
SCN10A-201ENST00000449082 RUFY3Q7L099 469 aa11.57□□□□□ -0.56
SCN10A-201ENST00000449082 BRAPQ7Z569 592 aa11.57□□□□□ -0.56
SCN10A-201ENST00000449082 SUPT20HQ8NEM7 779 aa11.57□□□□□ -0.56
SCN10A-201ENST00000449082 A0A1B0GUL7 405 aa11.57□□□□□ -0.56
SCN10A-201ENST00000449082 MCM7P33993 719 aa11.57□□□□□ -0.56
SCN10A-201ENST00000449082 USP48Q86UV5 1035 aa11.57□□□□□ -0.56
SCN10A-201ENST00000449082 ARHGEF10LQ9HCE6 1279 aa11.57□□□□□ -0.56
SCN10A-201ENST00000449082 INCENPQ9NQS7 918 aa11.57□□□□□ -0.56
SCN10A-201ENST00000449082 SAP30BPQ9UHR5 308 aaKnown RBP11.57□□□□□ -0.56
SCN10A-201ENST00000449082 HCLS1P14317 486 aaPredicted RBP11.57□□□□□ -0.56
SCN10A-201ENST00000449082 RAB3GAP1Q15042 981 aa11.57□□□□□ -0.56
SCN10A-201ENST00000449082 ZSCAN23Q3MJ62 389 aa11.57□□□□□ -0.56
SCN10A-201ENST00000449082 HOMER2Q9NSB8 354 aa11.57□□□□□ -0.56
SCN10A-201ENST00000449082 RTL1A6NKG5 1358 aa11.57□□□□□ -0.56
SCN10A-201ENST00000449082 FAM98CQ17RN3 349 aaKnown RBP11.57□□□□□ -0.56
SCN10A-201ENST00000449082 LRSAM1Q6UWE0 723 aa11.57□□□□□ -0.56
SCN10A-201ENST00000449082 CGNQ9P2M7 1197 aaKnown RBP11.57□□□□□ -0.56
SCN10A-201ENST00000449082 ATP7AQ04656 1500 aa11.56□□□□□ -0.56
SCN10A-201ENST00000449082 CALRP27797 417 aaKnown RBP11.56□□□□□ -0.56
SCN10A-201ENST00000449082 EIF6P56537 245 aaKnown RBP11.56□□□□□ -0.56
SCN10A-201ENST00000449082 ANO6Q4KMQ2 910 aa11.56□□□□□ -0.56
SCN10A-201ENST00000449082 WDR66Q8TBY9 1149 aa11.56□□□□□ -0.56
SCN10A-201ENST00000449082 SNX21Q969T3 373 aa11.56□□□□□ -0.56
SCN10A-201ENST00000449082 HOOK2Q96ED9 719 aa11.56□□□□□ -0.56
SCN10A-201ENST00000449082 ZBTB40Q9NUA8 1239 aa11.56□□□□□ -0.56
SCN10A-201ENST00000449082 COL17A1Q9UMD9 1497 aaPredicted RBP11.56□□□□□ -0.56
SCN10A-201ENST00000449082 BACH1O14867 736 aa11.56□□□□□ -0.56
SCN10A-201ENST00000449082 APBB1IPQ7Z5R6 666 aaPredicted RBP11.56□□□□□ -0.56
SCN10A-201ENST00000449082 MAPKBP1O60336 1514 aa11.56□□□□□ -0.56
SCN10A-201ENST00000449082 AK2P54819 239 aa11.56□□□□□ -0.56
SCN10A-201ENST00000449082 SSX2IPQ9Y2D8 614 aa11.56□□□□□ -0.56
SCN10A-201ENST00000449082 PTPDC1A2A3K4 754 aa11.56□□□□□ -0.56
SCN10A-201ENST00000449082 IL13P35225 146 aa11.56□□□□□ -0.56
SCN10A-201ENST00000449082 GNG11P61952 73 aa11.56□□□□□ -0.56
SCN10A-201ENST00000449082 CKAP4Q07065 602 aaKnown RBP11.56□□□□□ -0.56
SCN10A-201ENST00000449082 ZNF354CQ86Y25 554 aa11.56□□□□□ -0.56
SCN10A-201ENST00000449082 BBXQ8WY36 941 aaPredicted RBP11.56□□□□□ -0.56
SCN10A-201ENST00000449082 SELENOOQ9BVL4 669 aa11.56□□□□□ -0.56
SCN10A-201ENST00000449082 IKBKGQ9Y6K9 419 aa11.56□□□□□ -0.56
SCN10A-201ENST00000449082 CFAP43Q8NDM7 1665 aa11.56□□□□□ -0.56
SCN10A-201ENST00000449082 PRIM1P49642 420 aaKnown RBP11.56□□□□□ -0.56
SCN10A-201ENST00000449082 UBE4AQ14139 1066 aa11.56□□□□□ -0.56
SCN10A-201ENST00000449082 DPP8Q6V1X1 898 aaPredicted RBP11.56□□□□□ -0.56
SCN10A-201ENST00000449082 CHMLP26374 656 aa11.55□□□□□ -0.56
SCN10A-201ENST00000449082 TNNI3KQ59H18 835 aa11.55□□□□□ -0.56
SCN10A-201ENST00000449082 FAM212AQ96EL1 285 aa11.55□□□□□ -0.56
SCN10A-201ENST00000449082 FPGT-TNNI3KV9GXZ4 949 aa11.55□□□□□ -0.56
SCN10A-201ENST00000449082 DNM1Q05193 864 aaKnown RBP11.55□□□□□ -0.56
SCN10A-201ENST00000449082 USP21Q9UK80 565 aa11.55□□□□□ -0.56
SCN10A-201ENST00000449082 ZBTB21Q9ULJ3 1066 aa11.55□□□□□ -0.56
SCN10A-201ENST00000449082 PLEKHM2Q8IWE5 1019 aa11.55□□□□□ -0.56
SCN10A-201ENST00000449082 DACT1Q9NYF0 836 aa11.55□□□□□ -0.56
SCN10A-201ENST00000449082 PDE6BP35913 854 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms