RNA–Protein interactions for RNA: ENST00000448878.6

CHCHD3-203, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5 BASIC

Gene CHCHD3, Length 1,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-203ENST00000448878 SUPT20HL1Q3ZLR7 823 aa23■■□□□ 1.27
CHCHD3-203ENST00000448878 CFAP100Q494V2 611 aa23■■□□□ 1.27
CHCHD3-203ENST00000448878 PLA2G12BQ9BX93 195 aa23■■□□□ 1.27
CHCHD3-203ENST00000448878 JAG2Q9Y219 1238 aa23■■□□□ 1.27
CHCHD3-203ENST00000448878 PLIN1O60240 522 aa22.99■■□□□ 1.27
CHCHD3-203ENST00000448878 CSF1RP07333 972 aa22.99■■□□□ 1.27
CHCHD3-203ENST00000448878 ZBTB48P10074 688 aaPredicted RBP22.99■■□□□ 1.27
CHCHD3-203ENST00000448878 OTUD7BQ6GQQ9 843 aa22.99■■□□□ 1.27
CHCHD3-203ENST00000448878 OTOP1Q7RTM1 612 aa22.99■■□□□ 1.27
CHCHD3-203ENST00000448878 ZNF804AQ7Z570 1209 aa22.99■■□□□ 1.27
CHCHD3-203ENST00000448878 CERS5Q8N5B7 392 aa22.99■■□□□ 1.27
CHCHD3-203ENST00000448878 GCC1Q96CN9 775 aa22.99■■□□□ 1.27
CHCHD3-203ENST00000448878 COL1A1P02452 1464 aaPredicted RBP22.98■■□□□ 1.27
CHCHD3-203ENST00000448878 FLIIQ13045 1269 aa22.98■■□□□ 1.27
CHCHD3-203ENST00000448878 DNAAF4Q8WXU2 420 aa22.98■■□□□ 1.27
CHCHD3-203ENST00000448878 PPP2R3BQ9Y5P8 575 aa22.98■■□□□ 1.27
CHCHD3-203ENST00000448878 IGF2BP3O00425 579 aaKnown RBP eCLIP22.97■■□□□ 1.27
CHCHD3-203ENST00000448878 IREB2P48200 963 aaKnown RBP22.97■■□□□ 1.27
CHCHD3-203ENST00000448878 IFIT5Q13325 482 aaKnown RBP22.97■■□□□ 1.27
CHCHD3-203ENST00000448878 MAP3K11Q16584 847 aa22.97■■□□□ 1.27
CHCHD3-203ENST00000448878 NBPF12Q5TAG4 269 aaPredicted RBP22.97■■□□□ 1.27
CHCHD3-203ENST00000448878 INTS3Q68E01 1043 aaKnown RBP22.97■■□□□ 1.27
CHCHD3-203ENST00000448878 ERO1AQ96HE7 468 aa22.97■■□□□ 1.27
CHCHD3-203ENST00000448878 PRMT6Q96LA8 375 aaPredicted RBP22.97■■□□□ 1.27
CHCHD3-203ENST00000448878 POTEFA5A3E0 1075 aa22.96■■□□□ 1.27
CHCHD3-203ENST00000448878 CASP7P55210 303 aa22.96■■□□□ 1.27
CHCHD3-203ENST00000448878 MTMR14Q8NCE2 650 aa22.96■■□□□ 1.27
CHCHD3-203ENST00000448878 CD99L2Q8TCZ2 262 aa22.96■■□□□ 1.27
CHCHD3-203ENST00000448878 TAF7LQ5H9L4 462 aa22.95■■□□□ 1.26
CHCHD3-203ENST00000448878 LINS1Q8NG48 757 aa22.95■■□□□ 1.26
CHCHD3-203ENST00000448878 SPDYE2BA6NHP3 402 aa22.94■■□□□ 1.26
CHCHD3-203ENST00000448878 SPDYE6P0CI01 402 aa22.94■■□□□ 1.26
CHCHD3-203ENST00000448878 CRHR2Q13324 411 aa22.94■■□□□ 1.26
CHCHD3-203ENST00000448878 USP2O75604 605 aaPredicted RBP22.93■■□□□ 1.26
CHCHD3-203ENST00000448878 IL1R1P14778 569 aa22.93■■□□□ 1.26
CHCHD3-203ENST00000448878 RASA3Q14644 834 aa22.93■■□□□ 1.26
CHCHD3-203ENST00000448878 ANKRD13AQ8IZ07 590 aa22.93■■□□□ 1.26
CHCHD3-203ENST00000448878 EFCC1Q9HA90 598 aa22.93■■□□□ 1.26
CHCHD3-203ENST00000448878 PTPN22Q9Y2R2 807 aa22.93■■□□□ 1.26
CHCHD3-203ENST00000448878 SSC5DA1L4H1 1573 aa22.93■■□□□ 1.26
CHCHD3-203ENST00000448878 C15orf52Q6ZUT6 534 aaKnown RBP22.92■■□□□ 1.26
CHCHD3-203ENST00000448878 WWC1Q8IX03 1113 aa22.92■■□□□ 1.26
CHCHD3-203ENST00000448878 ELP3Q9H9T3 547 aa22.92■■□□□ 1.26
CHCHD3-203ENST00000448878 CNNM1Q9NRU3 951 aa22.92■■□□□ 1.26
CHCHD3-203ENST00000448878 UNCXA6NJT0 531 aa22.91■■□□□ 1.26
CHCHD3-203ENST00000448878 GJA5P36382 358 aa22.91■■□□□ 1.26
CHCHD3-203ENST00000448878 SP3Q02447 781 aa22.91■■□□□ 1.26
CHCHD3-203ENST00000448878 CCDC57Q2TAC2 916 aa22.91■■□□□ 1.26
CHCHD3-203ENST00000448878 LDHAL6AQ6ZMR3 332 aa22.91■■□□□ 1.26
CHCHD3-203ENST00000448878 ZNF594Q96JF6 807 aaPredicted RBP22.91■■□□□ 1.26
CHCHD3-203ENST00000448878 AOX1Q06278 1338 aa22.9■■□□□ 1.26
CHCHD3-203ENST00000448878 FKBP1AP62942 108 aaKnown RBP22.9■■□□□ 1.26
CHCHD3-203ENST00000448878 FOXO4P98177 505 aa22.9■■□□□ 1.26
CHCHD3-203ENST00000448878 LMBR1LQ6UX01 489 aa22.9■■□□□ 1.26
CHCHD3-203ENST00000448878 ECM29Q5VYK3 1845 aa22.89■■□□□ 1.26
CHCHD3-203ENST00000448878 IRS2Q9Y4H2 1338 aa22.89■■□□□ 1.26
CHCHD3-203ENST00000448878 EN2P19622 333 aaPredicted RBP22.89■■□□□ 1.25
CHCHD3-203ENST00000448878 TNFAIP1Q13829 316 aa22.89■■□□□ 1.25
CHCHD3-203ENST00000448878 HABP4Q5JVS0 413 aaKnown RBP22.89■■□□□ 1.25
CHCHD3-203ENST00000448878 OPTNQ96CV9 577 aa22.89■■□□□ 1.25
CHCHD3-203ENST00000448878 TMEM106CQ9BVX2 250 aa22.89■■□□□ 1.25
CHCHD3-203ENST00000448878 TDRD3Q9H7E2 651 aaKnown RBP22.89■■□□□ 1.25
CHCHD3-203ENST00000448878 SALL2Q9Y467 1007 aaPredicted RBP22.89■■□□□ 1.25
CHCHD3-203ENST00000448878 F6X3S4 739 aa22.88■■□□□ 1.25
CHCHD3-203ENST00000448878 CCDC27Q2M243 656 aa22.88■■□□□ 1.25
CHCHD3-203ENST00000448878 PTPN18Q99952 460 aa22.88■■□□□ 1.25
CHCHD3-203ENST00000448878 ZNF70Q9UC06 446 aaPredicted RBP22.88■■□□□ 1.25
CHCHD3-203ENST00000448878 TTF2Q9UNY4 1162 aaKnown RBP22.88■■□□□ 1.25
CHCHD3-203ENST00000448878 MFSD14BQ5SR56 506 aa22.87■■□□□ 1.25
CHCHD3-203ENST00000448878 TCP10L2B9ZVM9 353 aa22.86■■□□□ 1.25
CHCHD3-203ENST00000448878 GYG1P46976 350 aa22.85■■□□□ 1.25
CHCHD3-203ENST00000448878 ARHGEF6Q15052 776 aa22.85■■□□□ 1.25
CHCHD3-203ENST00000448878 TAF1CQ15572 869 aaPredicted RBP22.85■■□□□ 1.25
CHCHD3-203ENST00000448878 CCDC184Q52MB2 194 aa22.85■■□□□ 1.25
CHCHD3-203ENST00000448878 C9orf78Q9NZ63 289 aaPredicted RBP22.85■■□□□ 1.25
CHCHD3-203ENST00000448878 IL16Q14005 1332 aa22.84■■□□□ 1.25
CHCHD3-203ENST00000448878 TESPA1A2RU30 521 aaPredicted RBP22.84■■□□□ 1.25
CHCHD3-203ENST00000448878 VAMP4O75379 141 aa22.84■■□□□ 1.25
CHCHD3-203ENST00000448878 MYCP01106 439 aaPredicted RBP22.84■■□□□ 1.25
CHCHD3-203ENST00000448878 HIBADHP31937 336 aaKnown RBP22.84■■□□□ 1.25
CHCHD3-203ENST00000448878 TNNI2P48788 182 aa22.84■■□□□ 1.25
CHCHD3-203ENST00000448878 SPDYE2Q495Y8 402 aa22.84■■□□□ 1.25
CHCHD3-203ENST00000448878 EPHA10Q5JZY3 1008 aa22.84■■□□□ 1.25
CHCHD3-203ENST00000448878 BEND3Q5T5X7 828 aa22.84■■□□□ 1.25
CHCHD3-203ENST00000448878 CNKSR2Q8WXI2 1034 aa22.84■■□□□ 1.25
CHCHD3-203ENST00000448878 ZFYVE28Q9HCC9 887 aa22.84■■□□□ 1.25
CHCHD3-203ENST00000448878 FANCIQ9NVI1 1328 aa22.83■■□□□ 1.25
CHCHD3-203ENST00000448878 CCL15-CCL14A0A0B4J2E2 113 aa22.83■■□□□ 1.25
CHCHD3-203ENST00000448878 EXOSC9Q06265 439 aaKnown RBP22.83■■□□□ 1.25
CHCHD3-203ENST00000448878 CCL15Q16663 113 aa22.83■■□□□ 1.25
CHCHD3-203ENST00000448878 SLC4A8Q2Y0W8 1093 aa22.83■■□□□ 1.25
CHCHD3-203ENST00000448878 SLC9C1Q4G0N8 1177 aa22.83■■□□□ 1.25
CHCHD3-203ENST00000448878 NBPF11Q86T75 865 aa22.83■■□□□ 1.25
CHCHD3-203ENST00000448878 DZIP1LQ8IYY4 767 aaKnown RBP22.83■■□□□ 1.25
CHCHD3-203ENST00000448878 ARMC5Q96C12 935 aa22.83■■□□□ 1.25
CHCHD3-203ENST00000448878 SERPINA10Q9UK55 444 aa22.83■■□□□ 1.25
CHCHD3-203ENST00000448878 CSADQ9Y600 493 aa22.83■■□□□ 1.25
CHCHD3-203ENST00000448878 FAM205AQ6ZU69 1335 aa22.82■■□□□ 1.24
CHCHD3-203ENST00000448878 GTF2A2P52657 109 aa22.82■■□□□ 1.24
CHCHD3-203ENST00000448878 MAP3K9P80192 1104 aa22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 120.1 ms