RNA–Protein interactions for RNA: ENST00000448611.6

LMNA-208, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 1,943 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-208ENST00000448611 MINPP1Q9UNW1 487 aa21.1■□□□□ 0.97
LMNA-208ENST00000448611 TRAK2O60296 914 aa21.1■□□□□ 0.97
LMNA-208ENST00000448611 ST3GAL1Q11201 340 aa21.1■□□□□ 0.97
LMNA-208ENST00000448611 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.1■□□□□ 0.97
LMNA-208ENST00000448611 IDH1O75874 414 aaKnown RBP21.09■□□□□ 0.97
LMNA-208ENST00000448611 CCDC24Q8N4L8 307 aa21.09■□□□□ 0.97
LMNA-208ENST00000448611 UPF1Q92900 1129 aaKnown RBP eCLIP21.09■□□□□ 0.973e-9■■■■■ 28.3
LMNA-208ENST00000448611 MYO5AQ9Y4I1 1855 aaKnown RBP21.09■□□□□ 0.97
LMNA-208ENST00000448611 ZNF804BA4D1E1 1349 aa21.08■□□□□ 0.97
LMNA-208ENST00000448611 A0A0G2JLW4 131 aa21.08■□□□□ 0.97
LMNA-208ENST00000448611 TCRBV5S4A2TA0A5A2 114 aa21.08■□□□□ 0.97
LMNA-208ENST00000448611 GPAA1O43292 621 aa21.08■□□□□ 0.97
LMNA-208ENST00000448611 PDE6AP16499 860 aa21.08■□□□□ 0.97
LMNA-208ENST00000448611 TM4SF1P30408 202 aa21.08■□□□□ 0.97
LMNA-208ENST00000448611 RPS8P62241 208 aaKnown RBP21.08■□□□□ 0.97
LMNA-208ENST00000448611 UBE4AQ14139 1066 aa21.08■□□□□ 0.97
LMNA-208ENST00000448611 CAMKK2Q96RR4 588 aa21.08■□□□□ 0.97
LMNA-208ENST00000448611 TNRC6CQ9HCJ0 1690 aaKnown RBP21.08■□□□□ 0.96
LMNA-208ENST00000448611 DOCK2Q92608 1830 aa21.08■□□□□ 0.96
LMNA-208ENST00000448611 PTMSP20962 102 aa21.08■□□□□ 0.96
LMNA-208ENST00000448611 CCDC83Q8IWF9 413 aa21.08■□□□□ 0.96
LMNA-208ENST00000448611 WWC3Q9ULE0 1092 aa21.08■□□□□ 0.96
LMNA-208ENST00000448611 ZNF532Q9HCE3 1301 aa21.07■□□□□ 0.96
LMNA-208ENST00000448611 HMGB1P09429 215 aaKnown RBP21.07■□□□□ 0.96
LMNA-208ENST00000448611 TTLL5Q6EMB2 1281 aa21.07■□□□□ 0.96
LMNA-208ENST00000448611 CTNNA3Q9UI47 895 aa21.07■□□□□ 0.96
LMNA-208ENST00000448611 RGPD3A6NKT7 1758 aaPredicted RBP21.07■□□□□ 0.96
LMNA-208ENST00000448611 RGPD4Q7Z3J3 1758 aa21.07■□□□□ 0.96
LMNA-208ENST00000448611 WTIPA6NIX2 430 aaPredicted RBP21.06■□□□□ 0.96
LMNA-208ENST00000448611 E7EWF7 191 aa21.06■□□□□ 0.96
LMNA-208ENST00000448611 GOLGA6L22H0YM25 854 aa21.05■□□□□ 0.96
LMNA-208ENST00000448611 FGAP02671 866 aa21.05■□□□□ 0.96
LMNA-208ENST00000448611 GYS1P13807 737 aa21.05■□□□□ 0.96
LMNA-208ENST00000448611 SMC3Q9UQE7 1217 aa21.05■□□□□ 0.96
LMNA-208ENST00000448611 LAMA4Q16363 1823 aa21.04■□□□□ 0.96
LMNA-208ENST00000448611 EXOSC10Q01780 885 aaKnown RBP21.04■□□□□ 0.96
LMNA-208ENST00000448611 MAP3K12Q12852 859 aa21.04■□□□□ 0.96
LMNA-208ENST00000448611 DHX32Q7L7V1 743 aaKnown RBP21.04■□□□□ 0.96
LMNA-208ENST00000448611 NECAB1Q8N987 351 aa21.04■□□□□ 0.96
LMNA-208ENST00000448611 CNBD1Q8NA66 436 aa21.04■□□□□ 0.96
LMNA-208ENST00000448611 NPHP1O15259 732 aa21.04■□□□□ 0.96
LMNA-208ENST00000448611 GYG1P46976 350 aa21.04■□□□□ 0.96
LMNA-208ENST00000448611 Q6ZUG5 572 aa21.04■□□□□ 0.96
LMNA-208ENST00000448611 IMMTQ16891 758 aaKnown RBP21.03■□□□□ 0.96
LMNA-208ENST00000448611 WDR33Q9C0J8 1336 aaKnown RBP21.03■□□□□ 0.96
LMNA-208ENST00000448611 HMGB2P26583 209 aaKnown RBP21.02■□□□□ 0.96
LMNA-208ENST00000448611 FOXD4L5Q5VV16 416 aaPredicted RBP21.02■□□□□ 0.96
LMNA-208ENST00000448611 MCTP1Q6DN14 999 aa21.02■□□□□ 0.96
LMNA-208ENST00000448611 MAGEB6Q8N7X4 407 aa21.02■□□□□ 0.96
LMNA-208ENST00000448611 FOXD4L4Q8WXT5 416 aaPredicted RBP21.02■□□□□ 0.96
LMNA-208ENST00000448611 GJB2P29033 226 aa21.02■□□□□ 0.95
LMNA-208ENST00000448611 SKOR2Q2VWA4 1001 aaPredicted RBP21.02■□□□□ 0.95
LMNA-208ENST00000448611 PRR5LQ6MZQ0 368 aa21.02■□□□□ 0.95
LMNA-208ENST00000448611 ANKRD2Q9GZV1 360 aa21.02■□□□□ 0.95
LMNA-208ENST00000448611 GNL3LQ9NVN8 582 aaKnown RBP21.02■□□□□ 0.95
LMNA-208ENST00000448611 COL1A1P02452 1464 aaPredicted RBP21.01■□□□□ 0.95
LMNA-208ENST00000448611 CAVIN4Q5BKX8 364 aa21.01■□□□□ 0.95
LMNA-208ENST00000448611 FAM84BQ96KN1 310 aaPredicted RBP21.01■□□□□ 0.95
LMNA-208ENST00000448611 STRBPQ96SI9 672 aaKnown RBP21.01■□□□□ 0.95
LMNA-208ENST00000448611 AGXT2Q9BYV1 514 aa21.01■□□□□ 0.95
LMNA-208ENST00000448611 SYT1P21579 422 aa21■□□□□ 0.95
LMNA-208ENST00000448611 IQSEC3Q9UPP2 1182 aaPredicted RBP21■□□□□ 0.95
LMNA-208ENST00000448611 HAND2P61296 217 aa21■□□□□ 0.95
LMNA-208ENST00000448611 FBXO33Q7Z6M2 555 aa21■□□□□ 0.95
LMNA-208ENST00000448611 BRF1Q92994 677 aa21■□□□□ 0.95
LMNA-208ENST00000448611 AIDAQ96BJ3 306 aa21■□□□□ 0.95
LMNA-208ENST00000448611 LRRC2Q9BYS8 371 aa21■□□□□ 0.95
LMNA-208ENST00000448611 STX6O43752 255 aa20.99■□□□□ 0.95
LMNA-208ENST00000448611 CHAMP1Q96JM3 812 aa20.99■□□□□ 0.95
LMNA-208ENST00000448611 LMBRD1Q9NUN5 540 aa20.99■□□□□ 0.95
LMNA-208ENST00000448611 ZNF213O14771 459 aa20.98■□□□□ 0.95
LMNA-208ENST00000448611 SERPINB2P05120 415 aa20.98■□□□□ 0.95
LMNA-208ENST00000448611 KLRK1P26718 216 aa20.98■□□□□ 0.95
LMNA-208ENST00000448611 GRAPQ13588 217 aa20.98■□□□□ 0.95
LMNA-208ENST00000448611 GRAPLQ8TC17 118 aaPredicted RBP20.98■□□□□ 0.95
LMNA-208ENST00000448611 GTF3C6Q969F1 213 aa20.98■□□□□ 0.95
LMNA-208ENST00000448611 FBXL16Q8N461 479 aa20.98■□□□□ 0.95
LMNA-208ENST00000448611 TFCP2L1Q9NZI6 479 aa20.98■□□□□ 0.95
LMNA-208ENST00000448611 LRP2BPQ9P2M1 347 aa20.98■□□□□ 0.95
LMNA-208ENST00000448611 DTNBO60941 627 aa20.97■□□□□ 0.95
LMNA-208ENST00000448611 MBD4O95243 580 aa20.97■□□□□ 0.95
LMNA-208ENST00000448611 ZSCAN22P10073 491 aaPredicted RBP20.97■□□□□ 0.95
LMNA-208ENST00000448611 STK3Q13188 491 aa20.97■□□□□ 0.95
LMNA-208ENST00000448611 ALX1Q15699 326 aa20.97■□□□□ 0.95
LMNA-208ENST00000448611 ZNF827Q17R98 1081 aa20.97■□□□□ 0.95
LMNA-208ENST00000448611 CRY2Q49AN0 593 aa20.97■□□□□ 0.95
LMNA-208ENST00000448611 VPS37DQ86XT2 251 aa20.97■□□□□ 0.95
LMNA-208ENST00000448611 NBPF3Q9H094 633 aa20.97■□□□□ 0.95
LMNA-208ENST00000448611 GZF1Q9H116 711 aaPredicted RBP20.97■□□□□ 0.95
LMNA-208ENST00000448611 DENND2AQ9ULE3 1009 aa20.97■□□□□ 0.95
LMNA-208ENST00000448611 ZMYM6O95789 1325 aa20.97■□□□□ 0.95
LMNA-208ENST00000448611 SEMA3EO15041 775 aa20.96■□□□□ 0.95
LMNA-208ENST00000448611 FGD1P98174 961 aa20.96■□□□□ 0.95
LMNA-208ENST00000448611 IRS2Q9Y4H2 1338 aa20.96■□□□□ 0.95
LMNA-208ENST00000448611 PATL2C9JE40 543 aaKnown RBP20.96■□□□□ 0.95
LMNA-208ENST00000448611 DDR1Q08345 913 aa20.96■□□□□ 0.95
LMNA-208ENST00000448611 MB21D2Q8IYB1 491 aaPredicted RBP20.96■□□□□ 0.95
LMNA-208ENST00000448611 AKT1S1Q96B36 256 aa20.96■□□□□ 0.95
LMNA-208ENST00000448611 ARMT1Q9H993 441 aa20.96■□□□□ 0.95
LMNA-208ENST00000448611 PDS5AQ29RF7 1337 aaKnown RBP20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms