RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 LDHAL6AQ6ZMR3 332 aa17.32■□□□□ 0.36
PDLIM2-213ENST00000448520 ZNF804AQ7Z570 1209 aa17.32■□□□□ 0.36
PDLIM2-213ENST00000448520 CTU1Q7Z7A3 348 aaKnown RBP17.32■□□□□ 0.36
PDLIM2-213ENST00000448520 SSH1Q8WYL5 1049 aa17.32■□□□□ 0.36
PDLIM2-213ENST00000448520 C9orf78Q9NZ63 289 aaPredicted RBP17.32■□□□□ 0.36
PDLIM2-213ENST00000448520 RCAN3Q9UKA8 241 aa17.32■□□□□ 0.36
PDLIM2-213ENST00000448520 IRS2Q9Y4H2 1338 aa17.31■□□□□ 0.36
PDLIM2-213ENST00000448520 BCAR3O75815 825 aa17.31■□□□□ 0.36
PDLIM2-213ENST00000448520 ALDH1L1O75891 902 aa17.31■□□□□ 0.36
PDLIM2-213ENST00000448520 RARSP54136 660 aaKnown RBP17.31■□□□□ 0.36
PDLIM2-213ENST00000448520 PKN2Q16513 984 aaKnown RBP17.31■□□□□ 0.36
PDLIM2-213ENST00000448520 TAF7LQ5H9L4 462 aa17.31■□□□□ 0.36
PDLIM2-213ENST00000448520 HELBQ8NG08 1087 aaPredicted RBP17.31■□□□□ 0.36
PDLIM2-213ENST00000448520 MYO1BO43795 1136 aa17.3■□□□□ 0.36
PDLIM2-213ENST00000448520 PTPN12Q05209 780 aaKnown RBP17.3■□□□□ 0.36
PDLIM2-213ENST00000448520 SREBF2Q12772 1141 aa17.3■□□□□ 0.36
PDLIM2-213ENST00000448520 NOM1Q5C9Z4 860 aaKnown RBP17.3■□□□□ 0.36
PDLIM2-213ENST00000448520 LDLRAD1Q5T700 205 aa17.3■□□□□ 0.36
PDLIM2-213ENST00000448520 DEFB129Q9H1M3 183 aa17.3■□□□□ 0.36
PDLIM2-213ENST00000448520 CNNM1Q9NRU3 951 aa17.3■□□□□ 0.36
PDLIM2-213ENST00000448520 PPP2R3BQ9Y5P8 575 aa17.3■□□□□ 0.36
PDLIM2-213ENST00000448520 ZNF646O15015 1829 aaPredicted RBP17.3■□□□□ 0.36
PDLIM2-213ENST00000448520 UNCXA6NJT0 531 aa17.29■□□□□ 0.36
PDLIM2-213ENST00000448520 SNAP23O00161 211 aa17.29■□□□□ 0.36
PDLIM2-213ENST00000448520 CT47B1P0C2W7 299 aaPredicted RBP17.29■□□□□ 0.36
PDLIM2-213ENST00000448520 SMC4Q9NTJ3 1288 aa17.29■□□□□ 0.36
PDLIM2-213ENST00000448520 PPP1R12BO60237 982 aaPredicted RBP17.28■□□□□ 0.36
PDLIM2-213ENST00000448520 INHBEP58166 350 aa17.28■□□□□ 0.36
PDLIM2-213ENST00000448520 SUPT20HL1Q3ZLR7 823 aa17.28■□□□□ 0.36
PDLIM2-213ENST00000448520 EPHA10Q5JZY3 1008 aa17.28■□□□□ 0.36
PDLIM2-213ENST00000448520 CERS5Q8N5B7 392 aa17.28■□□□□ 0.36
PDLIM2-213ENST00000448520 MRPL50Q8N5N7 158 aaKnown RBP17.28■□□□□ 0.36
PDLIM2-213ENST00000448520 SRCIN1Q9C0H9 1055 aa17.28■□□□□ 0.36
PDLIM2-213ENST00000448520 ANGEL1Q9UNK9 670 aaKnown RBP17.28■□□□□ 0.36
PDLIM2-213ENST00000448520 COL1A1P02452 1464 aaPredicted RBP17.28■□□□□ 0.36
PDLIM2-213ENST00000448520 PLIN1O60240 522 aa17.27■□□□□ 0.36
PDLIM2-213ENST00000448520 TBC1D8O95759 1140 aa17.27■□□□□ 0.36
PDLIM2-213ENST00000448520 CENPBP07199 599 aaPredicted RBP17.27■□□□□ 0.36
PDLIM2-213ENST00000448520 PRKG1Q13976 671 aa17.27■□□□□ 0.36
PDLIM2-213ENST00000448520 UBE4AQ14139 1066 aa17.27■□□□□ 0.36
PDLIM2-213ENST00000448520 MAP3K11Q16584 847 aa17.27■□□□□ 0.36
PDLIM2-213ENST00000448520 CFAP100Q494V2 611 aa17.27■□□□□ 0.36
PDLIM2-213ENST00000448520 SLC4A10Q6U841 1118 aa17.27■□□□□ 0.36
PDLIM2-213ENST00000448520 SLC10A4Q96EP9 437 aa17.27■□□□□ 0.36
PDLIM2-213ENST00000448520 CFHR5Q9BXR6 569 aa17.27■□□□□ 0.36
PDLIM2-213ENST00000448520 GPR25O00155 361 aa17.26■□□□□ 0.35
PDLIM2-213ENST00000448520 ALDH1A1P00352 501 aa17.26■□□□□ 0.35
PDLIM2-213ENST00000448520 SPRYD7Q5W111 196 aa17.26■□□□□ 0.35
PDLIM2-213ENST00000448520 ZNF296Q8WUU4 475 aaPredicted RBP17.26■□□□□ 0.35
PDLIM2-213ENST00000448520 ZNF594Q96JF6 807 aaPredicted RBP17.26■□□□□ 0.35
PDLIM2-213ENST00000448520 PRMT6Q96LA8 375 aaPredicted RBP17.26■□□□□ 0.35
PDLIM2-213ENST00000448520 TNNQ9UQP3 1299 aa17.26■□□□□ 0.35
PDLIM2-213ENST00000448520 PDE4DIPQ5VU43 2346 aa17.26■□□□□ 0.35
PDLIM2-213ENST00000448520 FAM205AQ6ZU69 1335 aa17.25■□□□□ 0.35
PDLIM2-213ENST00000448520 SPDYE2BA6NHP3 402 aa17.25■□□□□ 0.35
PDLIM2-213ENST00000448520 MANSC4A6NHS7 340 aaPredicted RBP17.25■□□□□ 0.35
PDLIM2-213ENST00000448520 F8W031 263 aaPredicted RBP17.25■□□□□ 0.35
PDLIM2-213ENST00000448520 SPDYE6P0CI01 402 aa17.25■□□□□ 0.35
PDLIM2-213ENST00000448520 ALDH1L2Q3SY69 923 aa17.25■□□□□ 0.35
PDLIM2-213ENST00000448520 TDRD7Q8NHU6 1098 aaKnown RBP17.25■□□□□ 0.35
PDLIM2-213ENST00000448520 HIBADHP31937 336 aaKnown RBP17.24■□□□□ 0.35
PDLIM2-213ENST00000448520 RBM5P52756 815 aaKnown RBP eCLIP17.24■□□□□ 0.35
PDLIM2-213ENST00000448520 MKRN3Q13064 507 aaKnown RBP17.24■□□□□ 0.35
PDLIM2-213ENST00000448520 FKTNO75072 461 aa17.23■□□□□ 0.35
PDLIM2-213ENST00000448520 ZBTB48P10074 688 aaPredicted RBP17.23■□□□□ 0.35
PDLIM2-213ENST00000448520 FRAT1Q92837 279 aaPredicted RBP17.23■□□□□ 0.35
PDLIM2-213ENST00000448520 NOB1Q9ULX3 412 aaKnown RBP17.23■□□□□ 0.35
PDLIM2-213ENST00000448520 RIPOR2Q9Y4F9 1068 aa17.23■□□□□ 0.35
PDLIM2-213ENST00000448520 UTYO14607 1347 aa17.22■□□□□ 0.35
PDLIM2-213ENST00000448520 MROH5Q6ZUA9 1318 aa17.22■□□□□ 0.35
PDLIM2-213ENST00000448520 CLRN2A0PK11 232 aa17.22■□□□□ 0.35
PDLIM2-213ENST00000448520 IREB2P48200 963 aaKnown RBP17.22■□□□□ 0.35
PDLIM2-213ENST00000448520 TNFAIP1Q13829 316 aa17.22■□□□□ 0.35
PDLIM2-213ENST00000448520 MFSD14BQ5SR56 506 aa17.22■□□□□ 0.35
PDLIM2-213ENST00000448520 SUCLG2Q96I99 432 aa17.22■□□□□ 0.35
PDLIM2-213ENST00000448520 FAM84BQ96KN1 310 aaPredicted RBP17.22■□□□□ 0.35
PDLIM2-213ENST00000448520 VEZTQ9HBM0 779 aa17.22■□□□□ 0.35
PDLIM2-213ENST00000448520 SERPINA10Q9UK55 444 aa17.22■□□□□ 0.35
PDLIM2-213ENST00000448520 HPS5Q9UPZ3 1129 aa17.22■□□□□ 0.35
PDLIM2-213ENST00000448520 SUPT16HQ9Y5B9 1047 aaKnown RBP17.22■□□□□ 0.35
PDLIM2-213ENST00000448520 ECM29Q5VYK3 1845 aa17.21■□□□□ 0.35
PDLIM2-213ENST00000448520 RASA3Q14644 834 aa17.21■□□□□ 0.35
PDLIM2-213ENST00000448520 KAZALD1Q96I82 304 aa17.21■□□□□ 0.35
PDLIM2-213ENST00000448520 JAG2Q9Y219 1238 aa17.21■□□□□ 0.35
PDLIM2-213ENST00000448520 PCDHAC2Q9Y5I4 1007 aa17.21■□□□□ 0.35
PDLIM2-213ENST00000448520 USP2O75604 605 aaPredicted RBP17.2■□□□□ 0.34
PDLIM2-213ENST00000448520 NBPF7P0C2Y1 421 aaPredicted RBP17.2■□□□□ 0.34
PDLIM2-213ENST00000448520 GYG1P46976 350 aa17.2■□□□□ 0.34
PDLIM2-213ENST00000448520 SOX10P56693 466 aa17.2■□□□□ 0.34
PDLIM2-213ENST00000448520 RABL6Q3YEC7 729 aaPredicted RBP17.2■□□□□ 0.34
PDLIM2-213ENST00000448520 NBPF12Q5TAG4 269 aaPredicted RBP17.2■□□□□ 0.34
PDLIM2-213ENST00000448520 OTUD7BQ6GQQ9 843 aa17.2■□□□□ 0.34
PDLIM2-213ENST00000448520 FBXO46Q6PJ61 603 aaPredicted RBP17.2■□□□□ 0.34
PDLIM2-213ENST00000448520 VPS37DQ86XT2 251 aa17.2■□□□□ 0.34
PDLIM2-213ENST00000448520 IFNL1Q8IU54 200 aa17.2■□□□□ 0.34
PDLIM2-213ENST00000448520 WNK4Q96J92 1243 aa17.2■□□□□ 0.34
PDLIM2-213ENST00000448520 PUS3Q9BZE2 481 aaKnown RBP17.2■□□□□ 0.34
PDLIM2-213ENST00000448520 TTF2Q9UNY4 1162 aaKnown RBP17.2■□□□□ 0.34
PDLIM2-213ENST00000448520 A0A1B0GUL6 1792 aa17.2■□□□□ 0.34
PDLIM2-213ENST00000448520 SPDYE2Q495Y8 402 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms