RNA–Protein interactions for RNA: ENST00000448183.6

NEDD9-204, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best)

Gene NEDD9, Length 4,934 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-204ENST00000448183 CALM2P0DP24 149 aa8.8□□□□□ -1
NEDD9-204ENST00000448183 CALM3P0DP25 149 aa8.8□□□□□ -1
NEDD9-204ENST00000448183 ARID5AQ03989 594 aa8.8□□□□□ -1
NEDD9-204ENST00000448183 HEATR3Q7Z4Q2 680 aa8.8□□□□□ -1
NEDD9-204ENST00000448183 IQUBQ8NA54 791 aa8.8□□□□□ -1
NEDD9-204ENST00000448183 SERPINA10Q9UK55 444 aa8.8□□□□□ -1
NEDD9-204ENST00000448183 AKR1B15C9JRZ8 316 aaPredicted RBP8.8□□□□□ -1
NEDD9-204ENST00000448183 GSTO1P78417 241 aa8.8□□□□□ -1
NEDD9-204ENST00000448183 IFT81Q8WYA0 676 aa8.8□□□□□ -1
NEDD9-204ENST00000448183 MTRF1LQ9UGC7 380 aaKnown RBP8.8□□□□□ -1
NEDD9-204ENST00000448183 ACEP12821 1306 aa8.8□□□□□ -1
NEDD9-204ENST00000448183 TEX14Q8IWB6 1497 aa8.79□□□□□ -1
NEDD9-204ENST00000448183 TLDC2A0PJX2 215 aa8.79□□□□□ -1
NEDD9-204ENST00000448183 TERF1P54274 439 aa8.79□□□□□ -1
NEDD9-204ENST00000448183 KRT79Q5XKE5 535 aa8.79□□□□□ -1
NEDD9-204ENST00000448183 BICD1Q96G01 975 aa8.79□□□□□ -1
NEDD9-204ENST00000448183 PHF23Q9BUL5 403 aaPredicted RBP8.79□□□□□ -1
NEDD9-204ENST00000448183 SAMD15Q9P1V8 674 aa8.79□□□□□ -1
NEDD9-204ENST00000448183 NAPAP54920 295 aa8.79□□□□□ -1
NEDD9-204ENST00000448183 CCDC152Q4G0S7 254 aa8.79□□□□□ -1
NEDD9-204ENST00000448183 CCDC122Q5T0U0 273 aa8.79□□□□□ -1
NEDD9-204ENST00000448183 PA2G4Q9UQ80 394 aaKnown RBP8.79□□□□□ -1
NEDD9-204ENST00000448183 ELP1O95163 1332 aa8.79□□□□□ -1
NEDD9-204ENST00000448183 SOS1Q07889 1333 aaPredicted RBP8.79□□□□□ -1
NEDD9-204ENST00000448183 RNF113AO15541 343 aaKnown RBP8.79□□□□□ -1
NEDD9-204ENST00000448183 CHMP4BP1P59074 171 aa8.79□□□□□ -1
NEDD9-204ENST00000448183 ZNF445P59923 1031 aa8.79□□□□□ -1
NEDD9-204ENST00000448183 TUBB2AQ13885 445 aa8.79□□□□□ -1
NEDD9-204ENST00000448183 PPP1R9BQ96SB3 815 aa8.79□□□□□ -1
NEDD9-204ENST00000448183 TUBB2BQ9BVA1 445 aa8.79□□□□□ -1
NEDD9-204ENST00000448183 FBLN1P23142 703 aa8.79□□□□□ -1
NEDD9-204ENST00000448183 GBP6Q6ZN66 633 aa8.79□□□□□ -1
NEDD9-204ENST00000448183 SYNCQ9H7C4 482 aa8.79□□□□□ -1
NEDD9-204ENST00000448183 C6orf50Q9HD87 102 aa8.79□□□□□ -1
NEDD9-204ENST00000448183 RTL9Q8NET4 1388 aa8.79□□□□□ -1
NEDD9-204ENST00000448183 EXOC5O00471 708 aa8.78□□□□□ -1
NEDD9-204ENST00000448183 RIOK3O14730 519 aaKnown RBP8.78□□□□□ -1
NEDD9-204ENST00000448183 GABPB1Q06547 395 aaPredicted RBP8.78□□□□□ -1
NEDD9-204ENST00000448183 MYRIPQ8NFW9 859 aa8.78□□□□□ -1
NEDD9-204ENST00000448183 STIM2Q9P246 746 aa8.78□□□□□ -1
NEDD9-204ENST00000448183 MRVI1Q9Y6F6 885 aa8.78□□□□□ -1
NEDD9-204ENST00000448183 UGGT2Q9NYU1 1516 aa8.78□□□□□ -1
NEDD9-204ENST00000448183 A0A1B0GUL7 405 aa8.78□□□□□ -1
NEDD9-204ENST00000448183 A0A1B0GVL5 298 aa8.78□□□□□ -1
NEDD9-204ENST00000448183 KRT2P35908 639 aa8.78□□□□□ -1
NEDD9-204ENST00000448183 SLC4A8Q2Y0W8 1093 aa8.78□□□□□ -1
NEDD9-204ENST00000448183 WDR78Q5VTH9 848 aa8.78□□□□□ -1
NEDD9-204ENST00000448183 TSGA10Q9BZW7 698 aa8.78□□□□□ -1
NEDD9-204ENST00000448183 CEP83Q9Y592 693 aa8.78□□□□□ -1
NEDD9-204ENST00000448183 CTTNBP2Q8WZ74 1663 aa8.78□□□□□ -1
NEDD9-204ENST00000448183 GNAT2P19087 354 aa8.78□□□□□ -1
NEDD9-204ENST00000448183 SETDB1Q15047 1291 aa8.78□□□□□ -1
NEDD9-204ENST00000448183 NAA16Q6N069 864 aaPredicted RBP8.78□□□□□ -1
NEDD9-204ENST00000448183 CHST3Q7LGC8 479 aa8.78□□□□□ -1
NEDD9-204ENST00000448183 RGS22Q8NE09 1264 aa8.78□□□□□ -1
NEDD9-204ENST00000448183 IRX3P78415 501 aaPredicted RBP8.78□□□□□ -1
NEDD9-204ENST00000448183 B4GALNT4Q76KP1 1039 aa8.78□□□□□ -1
NEDD9-204ENST00000448183 HS2ST1Q7LGA3 356 aa8.78□□□□□ -1
NEDD9-204ENST00000448183 GSTA5Q7RTV2 222 aa8.78□□□□□ -1
NEDD9-204ENST00000448183 DAAM2Q86T65 1068 aa8.78□□□□□ -1
NEDD9-204ENST00000448183 TSPYL6Q8N831 410 aa8.78□□□□□ -1
NEDD9-204ENST00000448183 RSRC1Q96IZ7 334 aaKnown RBP8.78□□□□□ -1
NEDD9-204ENST00000448183 ADGRL1O94910 1474 aa8.77□□□□□ -1
NEDD9-204ENST00000448183 SBNO2Q9Y2G9 1366 aa8.77□□□□□ -1
NEDD9-204ENST00000448183 CCDC160A6NGH7 325 aa8.77□□□□□ -1
NEDD9-204ENST00000448183 PLCB3Q01970 1234 aa8.77□□□□□ -1
NEDD9-204ENST00000448183 CALCOCO2Q13137 446 aa8.77□□□□□ -1
NEDD9-204ENST00000448183 FBXO31Q5XUX0 539 aaPredicted RBP8.77□□□□□ -1
NEDD9-204ENST00000448183 KRBA2Q6ZNG9 492 aa8.77□□□□□ -1
NEDD9-204ENST00000448183 AFAP1L1Q8TED9 768 aa8.77□□□□□ -1
NEDD9-204ENST00000448183 SMIM23A6NLE4 172 aa8.77□□□□□ -1.01
NEDD9-204ENST00000448183 A6NNZ2 444 aa8.77□□□□□ -1.01
NEDD9-204ENST00000448183 TUBB8Q3ZCM7 444 aa8.77□□□□□ -1.01
NEDD9-204ENST00000448183 DTHD1Q6ZMT9 781 aa8.77□□□□□ -1.01
NEDD9-204ENST00000448183 NAPGQ99747 312 aaPredicted RBP8.77□□□□□ -1.01
NEDD9-204ENST00000448183 TTF2Q9UNY4 1162 aaKnown RBP8.77□□□□□ -1.01
NEDD9-204ENST00000448183 PPP1R2P41236 205 aa8.77□□□□□ -1.01
NEDD9-204ENST00000448183 LACTBP83111 547 aaPredicted RBP8.77□□□□□ -1.01
NEDD9-204ENST00000448183 TRIM14Q14142 442 aa8.77□□□□□ -1.01
NEDD9-204ENST00000448183 ATP6V0A2Q9Y487 856 aa8.77□□□□□ -1.01
NEDD9-204ENST00000448183 WDHD1O75717 1129 aaPredicted RBP8.77□□□□□ -1.01
NEDD9-204ENST00000448183 IGSF22Q8N9C0 903 aa8.77□□□□□ -1.01
NEDD9-204ENST00000448183 CLSTN2Q9H4D0 955 aa8.77□□□□□ -1.01
NEDD9-204ENST00000448183 DNAJC5BQ9UF47 199 aa8.77□□□□□ -1.01
NEDD9-204ENST00000448183 MTUS1Q9ULD2 1270 aa8.77□□□□□ -1.01
NEDD9-204ENST00000448183 NDUFAB1O14561 156 aa8.76□□□□□ -1.01
NEDD9-204ENST00000448183 MAP3K9P80192 1104 aa8.76□□□□□ -1.01
NEDD9-204ENST00000448183 KRT28Q7Z3Y7 464 aa8.76□□□□□ -1.01
NEDD9-204ENST00000448183 FMNL3Q8IVF7 1028 aa8.76□□□□□ -1.01
NEDD9-204ENST00000448183 PPFIBP2Q8ND30 876 aa8.76□□□□□ -1.01
NEDD9-204ENST00000448183 ZBTB9Q96C00 473 aa8.76□□□□□ -1.01
NEDD9-204ENST00000448183 CARD6Q9BX69 1037 aa8.76□□□□□ -1.01
NEDD9-204ENST00000448183 IMPG2Q9BZV3 1241 aa8.76□□□□□ -1.01
NEDD9-204ENST00000448183 PIK3C2GO75747 1445 aa8.76□□□□□ -1.01
NEDD9-204ENST00000448183 NUP160Q12769 1436 aa8.76□□□□□ -1.01
NEDD9-204ENST00000448183 A0A1B0GUA9 196 aa8.76□□□□□ -1.01
NEDD9-204ENST00000448183 EEF2P13639 858 aaKnown RBP8.76□□□□□ -1.01
NEDD9-204ENST00000448183 ZNF75DP51815 510 aa8.76□□□□□ -1.01
NEDD9-204ENST00000448183 RILPL1Q5EBL4 403 aa8.76□□□□□ -1.01
NEDD9-204ENST00000448183 CCDC26Q8TAB7 109 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms