RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 BOLA2Q9H3K6 86 aa21.98■■□□□ 1.11
TRAPPC4-203ENST00000447216 KCNQ5Q9NR82 932 aa21.98■■□□□ 1.11
TRAPPC4-203ENST00000447216 TTC41PQ6P2S7 1318 aa21.98■■□□□ 1.11
TRAPPC4-203ENST00000447216 YDJCA8MPS7 323 aa21.97■■□□□ 1.11
TRAPPC4-203ENST00000447216 ATP5JP18859 108 aa21.97■■□□□ 1.11
TRAPPC4-203ENST00000447216 CHAF1AQ13111 956 aaPredicted RBP21.97■■□□□ 1.11
TRAPPC4-203ENST00000447216 HMG20BQ9P0W2 317 aa21.97■■□□□ 1.11
TRAPPC4-203ENST00000447216 FBXW7Q969H0 707 aa21.96■■□□□ 1.11
TRAPPC4-203ENST00000447216 ZNF512BQ96KM6 892 aaPredicted RBP21.96■■□□□ 1.11
TRAPPC4-203ENST00000447216 RNF181Q9P0P0 153 aa21.96■■□□□ 1.11
TRAPPC4-203ENST00000447216 MAP4K4O95819 1239 aaPredicted RBP21.95■■□□□ 1.1
TRAPPC4-203ENST00000447216 C9orf131Q5VYM1 1079 aa21.95■■□□□ 1.1
TRAPPC4-203ENST00000447216 JDP2Q8WYK2 163 aa21.95■■□□□ 1.1
TRAPPC4-203ENST00000447216 DNAJC2Q99543 621 aaKnown RBP21.95■■□□□ 1.1
TRAPPC4-203ENST00000447216 OSBPL3Q9H4L5 887 aa21.95■■□□□ 1.1
TRAPPC4-203ENST00000447216 MYH7P12883 1935 aa21.95■■□□□ 1.1
TRAPPC4-203ENST00000447216 AOX1Q06278 1338 aa21.95■■□□□ 1.1
TRAPPC4-203ENST00000447216 ERC2O15083 957 aa21.94■■□□□ 1.1
TRAPPC4-203ENST00000447216 GLRX3O76003 335 aaKnown RBP21.94■■□□□ 1.1
TRAPPC4-203ENST00000447216 ZAP70P43403 619 aa21.94■■□□□ 1.1
TRAPPC4-203ENST00000447216 GTF2IP78347 998 aa21.94■■□□□ 1.1
TRAPPC4-203ENST00000447216 PODNQ7Z5L7 613 aa21.94■■□□□ 1.1
TRAPPC4-203ENST00000447216 SPATA5Q8NB90 893 aa21.94■■□□□ 1.1
TRAPPC4-203ENST00000447216 EDC3Q96F86 508 aaKnown RBP21.94■■□□□ 1.1
TRAPPC4-203ENST00000447216 DENND2AQ9ULE3 1009 aa21.94■■□□□ 1.1
TRAPPC4-203ENST00000447216 ZNRF3Q9ULT6 936 aa21.94■■□□□ 1.1
TRAPPC4-203ENST00000447216 DCAF8L1A6NGE4 600 aa21.93■■□□□ 1.1
TRAPPC4-203ENST00000447216 SEMA3EO15041 775 aa21.93■■□□□ 1.1
TRAPPC4-203ENST00000447216 RAD17O75943 681 aa21.93■■□□□ 1.1
TRAPPC4-203ENST00000447216 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.93■■□□□ 1.1
TRAPPC4-203ENST00000447216 DOCK2Q92608 1830 aa21.93■■□□□ 1.1
TRAPPC4-203ENST00000447216 HAUS7Q99871 368 aa21.93■■□□□ 1.1
TRAPPC4-203ENST00000447216 UTRNP46939 3433 aa21.92■■□□□ 1.1
TRAPPC4-203ENST00000447216 MXD3Q9BW11 206 aa21.92■■□□□ 1.1
TRAPPC4-203ENST00000447216 FAM205AQ6ZU69 1335 aa21.91■■□□□ 1.1
TRAPPC4-203ENST00000447216 GOLIM4O00461 696 aa21.91■■□□□ 1.1
TRAPPC4-203ENST00000447216 TTC22Q5TAA0 569 aa21.91■■□□□ 1.1
TRAPPC4-203ENST00000447216 TTLL5Q6EMB2 1281 aa21.91■■□□□ 1.1
TRAPPC4-203ENST00000447216 TBC1D9Q6ZT07 1266 aa21.91■■□□□ 1.1
TRAPPC4-203ENST00000447216 ANTXR1Q9H6X2 564 aa21.91■■□□□ 1.1
TRAPPC4-203ENST00000447216 ZNF541Q9H0D2 1346 aa21.9■■□□□ 1.1
TRAPPC4-203ENST00000447216 USP17L3A6NCW0 530 aa21.9■■□□□ 1.1
TRAPPC4-203ENST00000447216 USP17L4A6NCW7 530 aa21.9■■□□□ 1.1
TRAPPC4-203ENST00000447216 FZD9O00144 591 aa21.9■■□□□ 1.1
TRAPPC4-203ENST00000447216 CYP2E1P05181 493 aaPredicted RBP21.9■■□□□ 1.1
TRAPPC4-203ENST00000447216 GSPT1P15170 499 aaKnown RBP21.9■■□□□ 1.1
TRAPPC4-203ENST00000447216 CXCL9Q07325 125 aa21.9■■□□□ 1.1
TRAPPC4-203ENST00000447216 USP17L1Q7RTZ2 530 aa21.9■■□□□ 1.1
TRAPPC4-203ENST00000447216 PIH1D3Q9NQM4 214 aaKnown RBP21.9■■□□□ 1.1
TRAPPC4-203ENST00000447216 PSMD14O00487 310 aa21.89■■□□□ 1.09
TRAPPC4-203ENST00000447216 ZBTB22O15209 634 aa21.89■■□□□ 1.09
TRAPPC4-203ENST00000447216 PAG1Q9NWQ8 432 aa21.89■■□□□ 1.09
TRAPPC4-203ENST00000447216 PDS5AQ29RF7 1337 aaKnown RBP21.88■■□□□ 1.09
TRAPPC4-203ENST00000447216 EIF6P56537 245 aaKnown RBP21.88■■□□□ 1.09
TRAPPC4-203ENST00000447216 GRIK5Q16478 980 aa21.88■■□□□ 1.09
TRAPPC4-203ENST00000447216 DACT2Q5SW24 774 aa21.88■■□□□ 1.09
TRAPPC4-203ENST00000447216 STRIP1Q5VSL9 837 aa21.88■■□□□ 1.09
TRAPPC4-203ENST00000447216 CIAPIN1Q6FI81 312 aa21.88■■□□□ 1.09
TRAPPC4-203ENST00000447216 CERS5Q8N5B7 392 aa21.88■■□□□ 1.09
TRAPPC4-203ENST00000447216 WDR66Q8TBY9 1149 aa21.88■■□□□ 1.09
TRAPPC4-203ENST00000447216 MYH2Q9UKX2 1941 aa21.88■■□□□ 1.09
TRAPPC4-203ENST00000447216 TRIM6-TRIM34B2RNG4 842 aa21.87■■□□□ 1.09
TRAPPC4-203ENST00000447216 MFSD14BQ5SR56 506 aa21.87■■□□□ 1.09
TRAPPC4-203ENST00000447216 ABCF2Q9UG63 623 aa21.87■■□□□ 1.09
TRAPPC4-203ENST00000447216 RILPL2Q969X0 211 aa21.86■■□□□ 1.09
TRAPPC4-203ENST00000447216 GJA3Q9Y6H8 435 aa21.86■■□□□ 1.09
TRAPPC4-203ENST00000447216 MAST2Q6P0Q8 1798 aa21.86■■□□□ 1.09
TRAPPC4-203ENST00000447216 ADAMTSL1Q8N6G6 1762 aa21.86■■□□□ 1.09
TRAPPC4-203ENST00000447216 VIL1P09327 827 aaKnown RBP21.85■■□□□ 1.09
TRAPPC4-203ENST00000447216 TBC1D22AQ8WUA7 517 aa21.85■■□□□ 1.09
TRAPPC4-203ENST00000447216 ZBTB12Q9Y330 459 aaPredicted RBP21.85■■□□□ 1.09
TRAPPC4-203ENST00000447216 SALL1Q9NSC2 1324 aa21.84■■□□□ 1.09
TRAPPC4-203ENST00000447216 SDSP20132 328 aa21.84■■□□□ 1.09
TRAPPC4-203ENST00000447216 PRDX5P30044 214 aa21.84■■□□□ 1.09
TRAPPC4-203ENST00000447216 TNIP1Q15025 636 aa21.84■■□□□ 1.09
TRAPPC4-203ENST00000447216 RSBN1LQ6PCB5 846 aaPredicted RBP21.84■■□□□ 1.09
TRAPPC4-203ENST00000447216 F8W031 263 aaPredicted RBP21.83■■□□□ 1.09
TRAPPC4-203ENST00000447216 IDH1O75874 414 aaKnown RBP21.83■■□□□ 1.09
TRAPPC4-203ENST00000447216 TTF1Q15361 905 aaPredicted RBP21.83■■□□□ 1.09
TRAPPC4-203ENST00000447216 RAI14Q9P0K7 980 aa21.83■■□□□ 1.09
TRAPPC4-203ENST00000447216 LRP2BPQ9P2M1 347 aa21.83■■□□□ 1.09
TRAPPC4-203ENST00000447216 LDHBP07195 334 aaKnown RBP21.82■■□□□ 1.08
TRAPPC4-203ENST00000447216 FKBP1AP62942 108 aaKnown RBP21.82■■□□□ 1.08
TRAPPC4-203ENST00000447216 ERICH6Q7L0X2 663 aa21.82■■□□□ 1.08
TRAPPC4-203ENST00000447216 CNTROBQ8N137 903 aa21.82■■□□□ 1.08
TRAPPC4-203ENST00000447216 ZGPATQ8N5A5 531 aaKnown RBP21.82■■□□□ 1.08
TRAPPC4-203ENST00000447216 KBTBD3Q8NAB2 608 aa21.82■■□□□ 1.08
TRAPPC4-203ENST00000447216 EVI5LQ96CN4 794 aa21.82■■□□□ 1.08
TRAPPC4-203ENST00000447216 FSD1Q9BTV5 496 aa21.82■■□□□ 1.08
TRAPPC4-203ENST00000447216 CHGBP05060 677 aa21.81■■□□□ 1.08
TRAPPC4-203ENST00000447216 SLFNL1Q499Z3 407 aa21.81■■□□□ 1.08
TRAPPC4-203ENST00000447216 BMP2KLQ5H9B9 411 aa21.81■■□□□ 1.08
TRAPPC4-203ENST00000447216 SPTY2D1Q68D10 685 aaPredicted RBP21.81■■□□□ 1.08
TRAPPC4-203ENST00000447216 KIAA0825Q8IV33 1275 aa21.81■■□□□ 1.08
TRAPPC4-203ENST00000447216 GMLQ99445 158 aa21.81■■□□□ 1.08
TRAPPC4-203ENST00000447216 DDNO94850 711 aaPredicted RBP21.8■■□□□ 1.08
TRAPPC4-203ENST00000447216 GMPSP49915 693 aaPredicted RBP21.8■■□□□ 1.08
TRAPPC4-203ENST00000447216 SHTN1A0MZ66 631 aa21.79■■□□□ 1.08
TRAPPC4-203ENST00000447216 SCNN1DP51172 638 aa21.79■■□□□ 1.08
TRAPPC4-203ENST00000447216 MECOMQ03112 1051 aa21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms