RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 GALNT6Q8NCL4 622 aa6.98□□□□□ -1.29
HMGB1P16-201ENST00000447155 RSRP1Q9BUV0 290 aa6.98□□□□□ -1.29
HMGB1P16-201ENST00000447155 LACRTQ9GZZ8 138 aa6.98□□□□□ -1.29
HMGB1P16-201ENST00000447155 CCSER2Q9H7U1 834 aa6.98□□□□□ -1.29
HMGB1P16-201ENST00000447155 JPH1Q9HDC5 661 aaPredicted RBP6.98□□□□□ -1.29
HMGB1P16-201ENST00000447155 SEC31BQ9NQW1 1179 aa6.98□□□□□ -1.29
HMGB1P16-201ENST00000447155 DDX41Q9UJV9 622 aaKnown RBP6.98□□□□□ -1.29
HMGB1P16-201ENST00000447155 ALBP02768 609 aa6.97□□□□□ -1.29
HMGB1P16-201ENST00000447155 GMPRP36959 345 aa6.97□□□□□ -1.29
HMGB1P16-201ENST00000447155 CABP4P57796 275 aa6.97□□□□□ -1.29
HMGB1P16-201ENST00000447155 PCDH1Q08174 1060 aa6.97□□□□□ -1.29
HMGB1P16-201ENST00000447155 GDF6Q6KF10 455 aaPredicted RBP6.97□□□□□ -1.29
HMGB1P16-201ENST00000447155 ADAMTSL4Q6UY14 1074 aa6.97□□□□□ -1.29
HMGB1P16-201ENST00000447155 CHSY3Q70JA7 882 aa6.97□□□□□ -1.29
HMGB1P16-201ENST00000447155 VN1R5Q7Z5H4 357 aa6.97□□□□□ -1.29
HMGB1P16-201ENST00000447155 ZNF654Q8IZM8 581 aa6.97□□□□□ -1.29
HMGB1P16-201ENST00000447155 NECAB3Q96P71 396 aaPredicted RBP6.97□□□□□ -1.29
HMGB1P16-201ENST00000447155 TMEM39AQ9NV64 488 aa6.97□□□□□ -1.29
HMGB1P16-201ENST00000447155 GPN3Q9UHW5 284 aaPredicted RBP6.97□□□□□ -1.29
HMGB1P16-201ENST00000447155 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.97□□□□□ -1.29
HMGB1P16-201ENST00000447155 LILRB5O75023 590 aa6.96□□□□□ -1.3
HMGB1P16-201ENST00000447155 WFS1O76024 890 aa6.96□□□□□ -1.3
HMGB1P16-201ENST00000447155 B3GALT4O96024 378 aa6.96□□□□□ -1.3
HMGB1P16-201ENST00000447155 FAAP100Q0VG06 881 aa6.96□□□□□ -1.3
HMGB1P16-201ENST00000447155 GRIK5Q16478 980 aa6.96□□□□□ -1.3
HMGB1P16-201ENST00000447155 ZNF394Q53GI3 561 aa6.96□□□□□ -1.3
HMGB1P16-201ENST00000447155 RELL1Q8IUW5 271 aa6.96□□□□□ -1.3
HMGB1P16-201ENST00000447155 BTBD6Q96KE9 485 aa6.96□□□□□ -1.3
HMGB1P16-201ENST00000447155 SRA1Q9HD15 236 aaKnown RBP6.96□□□□□ -1.3
HMGB1P16-201ENST00000447155 PRDM6Q9NQX0 595 aa6.96□□□□□ -1.3
HMGB1P16-201ENST00000447155 SH2B1Q9NRF2 756 aaPredicted RBP6.96□□□□□ -1.3
HMGB1P16-201ENST00000447155 M0R082 166 aa6.95□□□□□ -1.3
HMGB1P16-201ENST00000447155 ENC1O14682 589 aa6.95□□□□□ -1.3
HMGB1P16-201ENST00000447155 ESRRAP11474 423 aaPredicted RBP6.95□□□□□ -1.3
HMGB1P16-201ENST00000447155 EPHA1P21709 976 aa6.95□□□□□ -1.3
HMGB1P16-201ENST00000447155 AFF1P51825 1210 aaKnown RBP6.95□□□□□ -1.3
HMGB1P16-201ENST00000447155 PPP2R3AQ06190 1150 aa6.95□□□□□ -1.3
HMGB1P16-201ENST00000447155 ZNF423Q2M1K9 1284 aa6.95□□□□□ -1.3
HMGB1P16-201ENST00000447155 NAALADL2Q58DX5 795 aa6.95□□□□□ -1.3
HMGB1P16-201ENST00000447155 LCE2CQ5TA81 110 aa6.95□□□□□ -1.3
HMGB1P16-201ENST00000447155 IL22RA1Q8N6P7 574 aa6.95□□□□□ -1.3
HMGB1P16-201ENST00000447155 ZNF417Q8TAU3 575 aa6.95□□□□□ -1.3
HMGB1P16-201ENST00000447155 ZNF587Q96SQ5 575 aaPredicted RBP6.95□□□□□ -1.3
HMGB1P16-201ENST00000447155 COPRSQ9NQ92 184 aa6.95□□□□□ -1.3
HMGB1P16-201ENST00000447155 KBTBD4Q9NVX7 518 aa6.95□□□□□ -1.3
HMGB1P16-201ENST00000447155 PCDHGB7Q9Y5F8 929 aa6.95□□□□□ -1.3
HMGB1P16-201ENST00000447155 SHISA8B8ZZ34 492 aa6.94□□□□□ -1.3
HMGB1P16-201ENST00000447155 H3BRJ5 948 aa6.94□□□□□ -1.3
HMGB1P16-201ENST00000447155 CELA2BP08218 269 aaPredicted RBP6.94□□□□□ -1.3
HMGB1P16-201ENST00000447155 CELA3AP09093 270 aa6.94□□□□□ -1.3
HMGB1P16-201ENST00000447155 RACK1P63244 317 aaKnown RBP6.94□□□□□ -1.3
HMGB1P16-201ENST00000447155 IKBKEQ14164 716 aa6.94□□□□□ -1.3
HMGB1P16-201ENST00000447155 DDX54Q8TDD1 881 aaKnown RBP6.94□□□□□ -1.3
HMGB1P16-201ENST00000447155 TMEM74Q96NL1 305 aa6.94□□□□□ -1.3
HMGB1P16-201ENST00000447155 TRIM56Q9BRZ2 755 aaKnown RBP6.94□□□□□ -1.3
HMGB1P16-201ENST00000447155 SAMM50Q9Y512 469 aa6.94□□□□□ -1.3
HMGB1P16-201ENST00000447155 EIF4EBP3O60516 100 aaPredicted RBP6.93□□□□□ -1.3
HMGB1P16-201ENST00000447155 AMPD1P23109 780 aa6.93□□□□□ -1.3
HMGB1P16-201ENST00000447155 GBP2P32456 591 aaPredicted RBP6.93□□□□□ -1.3
HMGB1P16-201ENST00000447155 BAG6P46379 1132 aa6.93□□□□□ -1.3
HMGB1P16-201ENST00000447155 LIG3P49916 1009 aa6.93□□□□□ -1.3
HMGB1P16-201ENST00000447155 ZNF157P51786 506 aaPredicted RBP6.93□□□□□ -1.3
HMGB1P16-201ENST00000447155 MAP3K11Q16584 847 aa6.93□□□□□ -1.3
HMGB1P16-201ENST00000447155 FAM117BQ6P1L5 589 aa6.93□□□□□ -1.3
HMGB1P16-201ENST00000447155 LYPD4Q6UWN0 246 aa6.93□□□□□ -1.3
HMGB1P16-201ENST00000447155 WFDC8Q8IUA0 241 aa6.93□□□□□ -1.3
HMGB1P16-201ENST00000447155 PHC3Q8NDX5 983 aa6.93□□□□□ -1.3
HMGB1P16-201ENST00000447155 WNT8BQ93098 351 aa6.93□□□□□ -1.3
HMGB1P16-201ENST00000447155 ACBD3Q9H3P7 528 aa6.93□□□□□ -1.3
HMGB1P16-201ENST00000447155 SOX17Q9H6I2 414 aaPredicted RBP6.93□□□□□ -1.3
HMGB1P16-201ENST00000447155 PPME1Q9Y570 386 aa6.93□□□□□ -1.3
HMGB1P16-201ENST00000447155 SOX1O00570 391 aaPredicted RBP6.92□□□□□ -1.3
HMGB1P16-201ENST00000447155 PAGE1O75459 146 aa6.92□□□□□ -1.3
HMGB1P16-201ENST00000447155 RPS26P62854 115 aaKnown RBP6.92□□□□□ -1.3
HMGB1P16-201ENST00000447155 PIP4K2BP78356 416 aa6.92□□□□□ -1.3
HMGB1P16-201ENST00000447155 GNL2Q13823 731 aaKnown RBP6.92□□□□□ -1.3
HMGB1P16-201ENST00000447155 TTBK2Q6IQ55 1244 aa6.92□□□□□ -1.3
HMGB1P16-201ENST00000447155 TREML4Q6UXN2 200 aa6.92□□□□□ -1.3
HMGB1P16-201ENST00000447155 C8orf86Q6ZUL3 223 aa6.92□□□□□ -1.3
HMGB1P16-201ENST00000447155 ZNF775Q96BV0 537 aaPredicted RBP6.92□□□□□ -1.3
HMGB1P16-201ENST00000447155 TINF2Q9BSI4 451 aa6.92□□□□□ -1.3
HMGB1P16-201ENST00000447155 CAPN10Q9HC96 672 aa6.92□□□□□ -1.3
HMGB1P16-201ENST00000447155 NME2P22392 152 aa6.91□□□□□ -1.3
HMGB1P16-201ENST00000447155 ARL4DP49703 201 aa6.91□□□□□ -1.3
HMGB1P16-201ENST00000447155 C19orf57Q0VDD7 668 aa6.91□□□□□ -1.3
HMGB1P16-201ENST00000447155 PCNX4Q63HM2 1172 aa6.91□□□□□ -1.3
HMGB1P16-201ENST00000447155 MSL1Q68DK7 614 aa6.91□□□□□ -1.3
HMGB1P16-201ENST00000447155 AGMOQ6ZNB7 445 aa6.91□□□□□ -1.3
HMGB1P16-201ENST00000447155 SLC43A3Q8NBI5 491 aa6.91□□□□□ -1.3
HMGB1P16-201ENST00000447155 RHOVQ96L33 236 aa6.91□□□□□ -1.3
HMGB1P16-201ENST00000447155 INPP5FQ9Y2H2 1132 aa6.91□□□□□ -1.3
HMGB1P16-201ENST00000447155 MINDY4BA8MYZ0 360 aa6.9□□□□□ -1.3
HMGB1P16-201ENST00000447155 LINC01387J3KSC0 135 aa6.9□□□□□ -1.3
HMGB1P16-201ENST00000447155 NID1P14543 1247 aa6.9□□□□□ -1.3
HMGB1P16-201ENST00000447155 CDC25BP30305 580 aa6.9□□□□□ -1.3
HMGB1P16-201ENST00000447155 EIF4A3P38919 411 aaKnown RBP6.9□□□□□ -1.3
HMGB1P16-201ENST00000447155 LMNB2Q03252 620 aa6.9□□□□□ -1.3
HMGB1P16-201ENST00000447155 AP3B2Q13367 1082 aa6.9□□□□□ -1.3
HMGB1P16-201ENST00000447155 SULF2Q8IWU5 870 aa6.9□□□□□ -1.3
HMGB1P16-201ENST00000447155 WHAMMQ8TF30 809 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms