RNA–Protein interactions for RNA: ENST00000447098.6

PTCH2-203, Transcript of patched 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTCH2, Length 4,298 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2-203ENST00000447098 ARHGAP23Q9P227 1491 aa13.1□□□□□ -0.31
PTCH2-203ENST00000447098 ADORA1P30542 326 aa13.1□□□□□ -0.31
PTCH2-203ENST00000447098 LRMPQ12912 555 aa13.1□□□□□ -0.31
PTCH2-203ENST00000447098 CREB3L3Q68CJ9 461 aa13.1□□□□□ -0.31
PTCH2-203ENST00000447098 KRT222Q8N1A0 295 aa13.1□□□□□ -0.31
PTCH2-203ENST00000447098 ZC3H12CQ9C0D7 883 aaKnown RBP13.1□□□□□ -0.31
PTCH2-203ENST00000447098 SNX14Q9Y5W7 946 aa13.1□□□□□ -0.31
PTCH2-203ENST00000447098 CRB1P82279 1406 aa13.09□□□□□ -0.31
PTCH2-203ENST00000447098 KIF13AQ9H1H9 1805 aa13.09□□□□□ -0.31
PTCH2-203ENST00000447098 RNF113AO15541 343 aaKnown RBP13.09□□□□□ -0.31
PTCH2-203ENST00000447098 XBP1P17861 261 aa13.09□□□□□ -0.31
PTCH2-203ENST00000447098 RXRAP19793 462 aa13.09□□□□□ -0.31
PTCH2-203ENST00000447098 CRACR2BQ8N4Y2 399 aaPredicted RBP13.09□□□□□ -0.31
PTCH2-203ENST00000447098 PALLDQ8WX93 1383 aa13.09□□□□□ -0.31
PTCH2-203ENST00000447098 PI16Q6UXB8 463 aa13.09□□□□□ -0.31
PTCH2-203ENST00000447098 IL6STP40189 918 aaPredicted RBP13.09□□□□□ -0.31
PTCH2-203ENST00000447098 TNNT3P45378 269 aaPredicted RBP13.09□□□□□ -0.31
PTCH2-203ENST00000447098 PICALMQ13492 652 aa13.09□□□□□ -0.31
PTCH2-203ENST00000447098 TMEM67Q5HYA8 995 aa13.09□□□□□ -0.31
PTCH2-203ENST00000447098 HOMER1Q86YM7 354 aa13.09□□□□□ -0.31
PTCH2-203ENST00000447098 SCAND2PQ9GZW5 306 aaPredicted RBP13.09□□□□□ -0.31
PTCH2-203ENST00000447098 UFL1O94874 794 aa13.08□□□□□ -0.31
PTCH2-203ENST00000447098 CERKQ8TCT0 537 aa13.08□□□□□ -0.31
PTCH2-203ENST00000447098 DBNLQ9UJU6 430 aaKnown RBP13.08□□□□□ -0.31
PTCH2-203ENST00000447098 CCDC171Q6TFL3 1326 aa13.08□□□□□ -0.31
PTCH2-203ENST00000447098 MST1RQ04912 1400 aa13.08□□□□□ -0.31
PTCH2-203ENST00000447098 SLIT1O75093 1534 aa13.08□□□□□ -0.31
PTCH2-203ENST00000447098 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.08□□□□□ -0.32
PTCH2-203ENST00000447098 MBD4O95243 580 aa13.08□□□□□ -0.32
PTCH2-203ENST00000447098 PCCAP05165 728 aaPredicted RBP13.08□□□□□ -0.32
PTCH2-203ENST00000447098 GYG1P46976 350 aa13.08□□□□□ -0.32
PTCH2-203ENST00000447098 PUM3Q15397 648 aaKnown RBP13.08□□□□□ -0.32
PTCH2-203ENST00000447098 FAM173BQ6P4H8 233 aa13.08□□□□□ -0.32
PTCH2-203ENST00000447098 KRT27Q7Z3Y8 459 aa13.08□□□□□ -0.32
PTCH2-203ENST00000447098 NLRP10Q86W26 655 aa13.08□□□□□ -0.32
PTCH2-203ENST00000447098 STX8Q9UNK0 236 aa13.08□□□□□ -0.32
PTCH2-203ENST00000447098 KLF18A0A0U1RQI7 1052 aa13.08□□□□□ -0.32
PTCH2-203ENST00000447098 MFSD6Q6ZSS7 791 aa13.08□□□□□ -0.32
PTCH2-203ENST00000447098 Q6ZUG5 572 aa13.08□□□□□ -0.32
PTCH2-203ENST00000447098 DNAJC25Q9H1X3 360 aa13.08□□□□□ -0.32
PTCH2-203ENST00000447098 DDX19AQ9NUU7 478 aaKnown RBP13.08□□□□□ -0.32
PTCH2-203ENST00000447098 TSPY2A6NKD2 308 aa13.07□□□□□ -0.32
PTCH2-203ENST00000447098 SGSM2O43147 1006 aa13.07□□□□□ -0.32
PTCH2-203ENST00000447098 ZKSCAN3Q9BRR0 538 aa13.07□□□□□ -0.32
PTCH2-203ENST00000447098 BRMS1Q9HCU9 246 aa13.07□□□□□ -0.32
PTCH2-203ENST00000447098 SLC12A7Q9Y666 1083 aa13.07□□□□□ -0.32
PTCH2-203ENST00000447098 C3P01024 1663 aa13.07□□□□□ -0.32
PTCH2-203ENST00000447098 A0A0D9SFI3 127 aa13.07□□□□□ -0.32
PTCH2-203ENST00000447098 ZFYP08048 801 aaPredicted RBP13.07□□□□□ -0.32
PTCH2-203ENST00000447098 TMEM87AQ8NBN3 555 aa13.07□□□□□ -0.32
PTCH2-203ENST00000447098 NEURL4Q96JN8 1562 aa13.07□□□□□ -0.32
PTCH2-203ENST00000447098 RPS8P62241 208 aaKnown RBP13.07□□□□□ -0.32
PTCH2-203ENST00000447098 GABPB1Q06547 395 aaPredicted RBP13.07□□□□□ -0.32
PTCH2-203ENST00000447098 IQCA1Q86XH1 822 aa13.07□□□□□ -0.32
PTCH2-203ENST00000447098 ZNF444Q8N0Y2 327 aaPredicted RBP13.07□□□□□ -0.32
PTCH2-203ENST00000447098 RAD50Q92878 1312 aa13.06□□□□□ -0.32
PTCH2-203ENST00000447098 GOLGA8AA7E2F4 631 aa13.06□□□□□ -0.32
PTCH2-203ENST00000447098 BCAMP50895 628 aa13.06□□□□□ -0.32
PTCH2-203ENST00000447098 RUFY3Q7L099 469 aa13.06□□□□□ -0.32
PTCH2-203ENST00000447098 MARCH10Q8NA82 808 aaPredicted RBP13.06□□□□□ -0.32
PTCH2-203ENST00000447098 NCOA7Q8NI08 942 aa13.06□□□□□ -0.32
PTCH2-203ENST00000447098 KIF18AQ8NI77 898 aa13.06□□□□□ -0.32
PTCH2-203ENST00000447098 KCNF1Q9H3M0 494 aa13.06□□□□□ -0.32
PTCH2-203ENST00000447098 ARMT1Q9H993 441 aa13.06□□□□□ -0.32
PTCH2-203ENST00000447098 CBX8Q9HC52 389 aa13.06□□□□□ -0.32
PTCH2-203ENST00000447098 PRDM1O75626 825 aa13.06□□□□□ -0.32
PTCH2-203ENST00000447098 TEX35Q5T0J7 233 aa13.06□□□□□ -0.32
PTCH2-203ENST00000447098 SSH2Q76I76 1423 aa13.06□□□□□ -0.32
PTCH2-203ENST00000447098 SASH1O94885 1247 aa13.06□□□□□ -0.32
PTCH2-203ENST00000447098 KBTBD3Q8NAB2 608 aa13.06□□□□□ -0.32
PTCH2-203ENST00000447098 TRERF1Q96PN7 1200 aa13.06□□□□□ -0.32
PTCH2-203ENST00000447098 VAT1LQ9HCJ6 419 aa13.06□□□□□ -0.32
PTCH2-203ENST00000447098 TMOD2Q9NZR1 351 aa13.06□□□□□ -0.32
PTCH2-203ENST00000447098 NRBP1Q9UHY1 535 aa13.06□□□□□ -0.32
PTCH2-203ENST00000447098 ATP10DQ9P241 1426 aa13.05□□□□□ -0.32
PTCH2-203ENST00000447098 TPM4P67936 248 aa13.05□□□□□ -0.32
PTCH2-203ENST00000447098 PTPN12Q05209 780 aaKnown RBP13.05□□□□□ -0.32
PTCH2-203ENST00000447098 APOBRQ0VD83 1088 aa13.05□□□□□ -0.32
PTCH2-203ENST00000447098 SUSD4Q5VX71 490 aa13.05□□□□□ -0.32
PTCH2-203ENST00000447098 KINO60870 393 aaKnown RBP13.05□□□□□ -0.32
PTCH2-203ENST00000447098 NCBP1Q09161 790 aaKnown RBP13.05□□□□□ -0.32
PTCH2-203ENST00000447098 C8orf76Q96K31 380 aa13.05□□□□□ -0.32
PTCH2-203ENST00000447098 COPRSQ9NQ92 184 aa13.05□□□□□ -0.32
PTCH2-203ENST00000447098 NRKQ7Z2Y5 1582 aa13.05□□□□□ -0.32
PTCH2-203ENST00000447098 PHKA1P46020 1223 aa13.05□□□□□ -0.32
PTCH2-203ENST00000447098 PTH1RQ03431 593 aa13.05□□□□□ -0.32
PTCH2-203ENST00000447098 ERFEQ4G0M1 354 aa13.05□□□□□ -0.32
PTCH2-203ENST00000447098 ZNF397Q8NF99 534 aaPredicted RBP13.05□□□□□ -0.32
PTCH2-203ENST00000447098 STK32BQ9NY57 414 aa13.05□□□□□ -0.32
PTCH2-203ENST00000447098 MTMR6Q9Y217 621 aa13.05□□□□□ -0.32
PTCH2-203ENST00000447098 GPAA1O43292 621 aa13.05□□□□□ -0.32
PTCH2-203ENST00000447098 SKILP12757 684 aa13.05□□□□□ -0.32
PTCH2-203ENST00000447098 ZNF75DP51815 510 aa13.05□□□□□ -0.32
PTCH2-203ENST00000447098 RASEFQ8IZ41 740 aa13.05□□□□□ -0.32
PTCH2-203ENST00000447098 LPIN2Q92539 896 aa13.05□□□□□ -0.32
PTCH2-203ENST00000447098 ORC3Q9UBD5 711 aaPredicted RBP13.05□□□□□ -0.32
PTCH2-203ENST00000447098 ADCY9O60503 1353 aa13.05□□□□□ -0.32
PTCH2-203ENST00000447098 UBR1Q8IWV7 1749 aa13.04□□□□□ -0.32
PTCH2-203ENST00000447098 COL3A1P02461 1466 aaPredicted RBP13.04□□□□□ -0.32
PTCH2-203ENST00000447098 BAG3O95817 575 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms