RNA–Protein interactions for RNA: ENST00000444987.1

LRRC42-204, Transcript of leucine rich repeat containing 42, humanhuman

TSL 5

Gene LRRC42, Length 1,044 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC42-204ENST00000444987 ATP8B2P98198 1209 aa23.48■■□□□ 1.35
LRRC42-204ENST00000444987 SCARF1Q14162 830 aa23.48■■□□□ 1.35
LRRC42-204ENST00000444987 ATP2B3Q16720 1220 aa23.48■■□□□ 1.35
LRRC42-204ENST00000444987 KRT26Q7Z3Y9 468 aa23.48■■□□□ 1.35
LRRC42-204ENST00000444987 JMYQ8N9B5 988 aa23.48■■□□□ 1.35
LRRC42-204ENST00000444987 MTMR14Q8NCE2 650 aa23.48■■□□□ 1.35
LRRC42-204ENST00000444987 TBC1D22AQ8WUA7 517 aa23.48■■□□□ 1.35
LRRC42-204ENST00000444987 CHMP4BQ9H444 224 aaKnown RBP23.48■■□□□ 1.35
LRRC42-204ENST00000444987 POLR2AP24928 1970 aaKnown RBP23.47■■□□□ 1.35
LRRC42-204ENST00000444987 SULF1Q8IWU6 871 aa23.47■■□□□ 1.35
LRRC42-204ENST00000444987 CERS5Q8N5B7 392 aa23.47■■□□□ 1.35
LRRC42-204ENST00000444987 GGA3Q9NZ52 723 aa23.47■■□□□ 1.35
LRRC42-204ENST00000444987 AKAP2Q9Y2D5 859 aa23.47■■□□□ 1.35
LRRC42-204ENST00000444987 PNMA6EA0A0J9YXQ4 647 aa23.46■■□□□ 1.35
LRRC42-204ENST00000444987 TRAF5O00463 557 aa23.46■■□□□ 1.35
LRRC42-204ENST00000444987 CNTNAP1P78357 1384 aa23.46■■□□□ 1.35
LRRC42-204ENST00000444987 POLA2Q14181 598 aa23.46■■□□□ 1.35
LRRC42-204ENST00000444987 USP48Q86UV5 1035 aa23.46■■□□□ 1.35
LRRC42-204ENST00000444987 PANK1Q8TE04 598 aa23.46■■□□□ 1.35
LRRC42-204ENST00000444987 SSH3Q8TE77 659 aa23.46■■□□□ 1.35
LRRC42-204ENST00000444987 RASSF10A6NK89 507 aa23.45■■□□□ 1.34
LRRC42-204ENST00000444987 WNT10BO00744 389 aa23.45■■□□□ 1.34
LRRC42-204ENST00000444987 FRAT2O75474 233 aaPredicted RBP23.45■■□□□ 1.34
LRRC42-204ENST00000444987 BCAMP50895 628 aa23.45■■□□□ 1.34
LRRC42-204ENST00000444987 MVPQ14764 893 aaKnown RBP23.45■■□□□ 1.34
LRRC42-204ENST00000444987 MFSD14BQ5SR56 506 aa23.45■■□□□ 1.34
LRRC42-204ENST00000444987 CST9Q5W186 159 aa23.45■■□□□ 1.34
LRRC42-204ENST00000444987 DDX19BQ9UMR2 479 aa23.45■■□□□ 1.34
LRRC42-204ENST00000444987 MYH13Q9UKX3 1938 aa23.45■■□□□ 1.34
LRRC42-204ENST00000444987 ECM29Q5VYK3 1845 aa23.45■■□□□ 1.34
LRRC42-204ENST00000444987 CEP350Q5VT06 3117 aa23.44■■□□□ 1.34
LRRC42-204ENST00000444987 G3BP1Q13283 466 aaKnown RBP eCLIP23.44■■□□□ 1.34
LRRC42-204ENST00000444987 PDE3AQ14432 1141 aa23.44■■□□□ 1.34
LRRC42-204ENST00000444987 ANGEL2Q5VTE6 544 aaKnown RBP23.44■■□□□ 1.34
LRRC42-204ENST00000444987 ZBED3Q96IU2 234 aaPredicted RBP23.44■■□□□ 1.34
LRRC42-204ENST00000444987 GNL3LQ9NVN8 582 aaKnown RBP23.44■■□□□ 1.34
LRRC42-204ENST00000444987 SUGT1Q9Y2Z0 365 aa23.44■■□□□ 1.34
LRRC42-204ENST00000444987 SEMA3EO15041 775 aa23.43■■□□□ 1.34
LRRC42-204ENST00000444987 CELF2O95319 508 aaKnown RBP23.43■■□□□ 1.34
LRRC42-204ENST00000444987 DLGAP5Q15398 846 aa23.43■■□□□ 1.34
LRRC42-204ENST00000444987 FMR1Q06787 632 aaKnown RBP eCLIP23.42■■□□□ 1.34
LRRC42-204ENST00000444987 DEFB115Q30KQ5 88 aa23.42■■□□□ 1.34
LRRC42-204ENST00000444987 NBPF9Q3BBW0 867 aa23.42■■□□□ 1.34
LRRC42-204ENST00000444987 HHIPL1Q96JK4 782 aa23.42■■□□□ 1.34
LRRC42-204ENST00000444987 SERPINA10Q9UK55 444 aa23.42■■□□□ 1.34
LRRC42-204ENST00000444987 ABT1Q9ULW3 272 aaKnown RBP23.42■■□□□ 1.34
LRRC42-204ENST00000444987 TLL2Q9Y6L7 1015 aa23.42■■□□□ 1.34
LRRC42-204ENST00000444987 ASTN2O75129 1339 aaPredicted RBP23.4■■□□□ 1.34
LRRC42-204ENST00000444987 ADM5C9JUS6 153 aa23.4■■□□□ 1.34
LRRC42-204ENST00000444987 MYO1BO43795 1136 aa23.4■■□□□ 1.34
LRRC42-204ENST00000444987 HDLBPQ00341 1268 aaKnown RBP23.4■■□□□ 1.34
LRRC42-204ENST00000444987 TFCP2Q12800 502 aa23.4■■□□□ 1.34
LRRC42-204ENST00000444987 APOBEC3FQ8IUX4 373 aaKnown RBP23.4■■□□□ 1.34
LRRC42-204ENST00000444987 WDR66Q8TBY9 1149 aa23.4■■□□□ 1.34
LRRC42-204ENST00000444987 MRIQ9BWK5 157 aa23.4■■□□□ 1.34
LRRC42-204ENST00000444987 MKRN1Q9UHC7 482 aaKnown RBP23.4■■□□□ 1.34
LRRC42-204ENST00000444987 NOP58Q9Y2X3 529 aaKnown RBP23.4■■□□□ 1.34
LRRC42-204ENST00000444987 MAST3O60307 1309 aa23.39■■□□□ 1.34
LRRC42-204ENST00000444987 COL1A1P02452 1464 aaPredicted RBP23.39■■□□□ 1.34
LRRC42-204ENST00000444987 CFAP100Q494V2 611 aa23.39■■□□□ 1.33
LRRC42-204ENST00000444987 C1orf115Q9H7X2 142 aa23.39■■□□□ 1.33
LRRC42-204ENST00000444987 GPR108Q9NPR9 543 aa23.39■■□□□ 1.33
LRRC42-204ENST00000444987 TTF2Q9UNY4 1162 aaKnown RBP23.39■■□□□ 1.33
LRRC42-204ENST00000444987 IQSEC3Q9UPP2 1182 aaPredicted RBP23.39■■□□□ 1.33
LRRC42-204ENST00000444987 JAG2Q9Y219 1238 aa23.39■■□□□ 1.33
LRRC42-204ENST00000444987 A0A1B0GUL7 405 aa23.38■■□□□ 1.33
LRRC42-204ENST00000444987 SPDYE2BA6NHP3 402 aa23.38■■□□□ 1.33
LRRC42-204ENST00000444987 F8W031 263 aaPredicted RBP23.38■■□□□ 1.33
LRRC42-204ENST00000444987 SPDYE6P0CI01 402 aa23.38■■□□□ 1.33
LRRC42-204ENST00000444987 CHAF1AQ13111 956 aaPredicted RBP23.38■■□□□ 1.33
LRRC42-204ENST00000444987 CEP85Q6P2H3 762 aa23.38■■□□□ 1.33
LRRC42-204ENST00000444987 SAPCD2Q86UD0 394 aa23.38■■□□□ 1.33
LRRC42-204ENST00000444987 DENND2AQ9ULE3 1009 aa23.38■■□□□ 1.33
LRRC42-204ENST00000444987 COG6Q9Y2V7 657 aa23.38■■□□□ 1.33
LRRC42-204ENST00000444987 PDS5AQ29RF7 1337 aaKnown RBP23.37■■□□□ 1.33
LRRC42-204ENST00000444987 ECE1P42892 770 aa23.37■■□□□ 1.33
LRRC42-204ENST00000444987 FKBP1BP68106 108 aa23.37■■□□□ 1.33
LRRC42-204ENST00000444987 RPAP2Q8IXW5 612 aaPredicted RBP23.37■■□□□ 1.33
LRRC42-204ENST00000444987 C2orf69Q8N8R5 385 aa23.37■■□□□ 1.33
LRRC42-204ENST00000444987 CDCA5Q96FF9 252 aa23.37■■□□□ 1.33
LRRC42-204ENST00000444987 ZNF408Q9H9D4 720 aa23.37■■□□□ 1.33
LRRC42-204ENST00000444987 ZBTB40Q9NUA8 1239 aa23.37■■□□□ 1.33
LRRC42-204ENST00000444987 SALL1Q9NSC2 1324 aa23.36■■□□□ 1.33
LRRC42-204ENST00000444987 SURF6O75683 361 aaKnown RBP23.36■■□□□ 1.33
LRRC42-204ENST00000444987 TIMM10P62072 90 aa23.36■■□□□ 1.33
LRRC42-204ENST00000444987 CCDC102BQ68D86 513 aa23.36■■□□□ 1.33
LRRC42-204ENST00000444987 GBA2Q9HCG7 927 aaPredicted RBP23.36■■□□□ 1.33
LRRC42-204ENST00000444987 PPP2R3BQ9Y5P8 575 aa23.36■■□□□ 1.33
LRRC42-204ENST00000444987 VEGFBP49765 207 aa23.35■■□□□ 1.33
LRRC42-204ENST00000444987 XAGE2Q96GT9 111 aa23.35■■□□□ 1.33
LRRC42-204ENST00000444987 PHKA1P46020 1223 aa23.34■■□□□ 1.33
LRRC42-204ENST00000444987 RBM5P52756 815 aaKnown RBP eCLIP23.34■■□□□ 1.33
LRRC42-204ENST00000444987 OS9Q13438 667 aaPredicted RBP23.34■■□□□ 1.33
LRRC42-204ENST00000444987 HSP90AB4PQ58FF6 505 aa23.34■■□□□ 1.33
LRRC42-204ENST00000444987 ZGPATQ8N5A5 531 aaKnown RBP23.34■■□□□ 1.33
LRRC42-204ENST00000444987 PRMT6Q96LA8 375 aaPredicted RBP23.34■■□□□ 1.33
LRRC42-204ENST00000444987 PAPPA2Q9BXP8 1791 aa23.33■■□□□ 1.33
LRRC42-204ENST00000444987 HMMRO75330 724 aa23.33■■□□□ 1.33
LRRC42-204ENST00000444987 ADORA1P30542 326 aa23.33■■□□□ 1.33
LRRC42-204ENST00000444987 NF2P35240 595 aa23.33■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms