RNA–Protein interactions for RNA: ENST00000444677.5

GARNL3-208, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-208ENST00000444677 ZNF609O15014 1411 aa16.83■□□□□ 0.28
GARNL3-208ENST00000444677 IFIT1P09914 478 aaKnown RBP16.83■□□□□ 0.28
GARNL3-208ENST00000444677 TFCP2Q12800 502 aa16.83■□□□□ 0.28
GARNL3-208ENST00000444677 CHAF1AQ13111 956 aaPredicted RBP16.83■□□□□ 0.28
GARNL3-208ENST00000444677 GRIK5Q16478 980 aa16.83■□□□□ 0.28
GARNL3-208ENST00000444677 NBPF9Q3BBW0 867 aa16.83■□□□□ 0.28
GARNL3-208ENST00000444677 CST9Q5W186 159 aa16.83■□□□□ 0.28
GARNL3-208ENST00000444677 LPIN2Q92539 896 aa16.83■□□□□ 0.28
GARNL3-208ENST00000444677 CREBZFQ9NS37 354 aa16.83■□□□□ 0.28
GARNL3-208ENST00000444677 FAM205AQ6ZU69 1335 aa16.82■□□□□ 0.28
GARNL3-208ENST00000444677 MYO3BQ8WXR4 1341 aa16.82■□□□□ 0.28
GARNL3-208ENST00000444677 TMEM88BA6NKF7 163 aa16.82■□□□□ 0.28
GARNL3-208ENST00000444677 SLC5A1P13866 664 aa16.82■□□□□ 0.28
GARNL3-208ENST00000444677 ADORA1P30542 326 aa16.82■□□□□ 0.28
GARNL3-208ENST00000444677 POLA2Q14181 598 aa16.82■□□□□ 0.28
GARNL3-208ENST00000444677 ATP2B3Q16720 1220 aa16.82■□□□□ 0.28
GARNL3-208ENST00000444677 CAVIN4Q5BKX8 364 aa16.82■□□□□ 0.28
GARNL3-208ENST00000444677 ANGEL2Q5VTE6 544 aaKnown RBP16.82■□□□□ 0.28
GARNL3-208ENST00000444677 CDC37L1Q7L3B6 337 aa16.82■□□□□ 0.28
GARNL3-208ENST00000444677 VPS37DQ86XT2 251 aa16.82■□□□□ 0.28
GARNL3-208ENST00000444677 JMYQ8N9B5 988 aa16.82■□□□□ 0.28
GARNL3-208ENST00000444677 GGA3Q9NZ52 723 aa16.82■□□□□ 0.28
GARNL3-208ENST00000444677 MKRN1Q9UHC7 482 aaKnown RBP16.82■□□□□ 0.28
GARNL3-208ENST00000444677 TIMM10P62072 90 aa16.81■□□□□ 0.28
GARNL3-208ENST00000444677 A0A1B0GUL6 1792 aa16.81■□□□□ 0.28
GARNL3-208ENST00000444677 WNT10BO00744 389 aa16.8■□□□□ 0.28
GARNL3-208ENST00000444677 CELF2O95319 508 aaKnown RBP16.8■□□□□ 0.28
GARNL3-208ENST00000444677 MVPQ14764 893 aaKnown RBP16.8■□□□□ 0.28
GARNL3-208ENST00000444677 KRT26Q7Z3Y9 468 aa16.8■□□□□ 0.28
GARNL3-208ENST00000444677 OGFOD1Q8N543 542 aa16.8■□□□□ 0.28
GARNL3-208ENST00000444677 SSH3Q8TE77 659 aa16.8■□□□□ 0.28
GARNL3-208ENST00000444677 DCPSQ96C86 337 aaKnown RBP16.8■□□□□ 0.28
GARNL3-208ENST00000444677 ZBED3Q96IU2 234 aaPredicted RBP16.8■□□□□ 0.28
GARNL3-208ENST00000444677 ZNF408Q9H9D4 720 aa16.8■□□□□ 0.28
GARNL3-208ENST00000444677 AOX1Q06278 1338 aa16.79■□□□□ 0.28
GARNL3-208ENST00000444677 FRAT2O75474 233 aaPredicted RBP16.79■□□□□ 0.28
GARNL3-208ENST00000444677 MS4A1P11836 297 aa16.79■□□□□ 0.28
GARNL3-208ENST00000444677 FKBP1AP62942 108 aaKnown RBP16.79■□□□□ 0.28
GARNL3-208ENST00000444677 G3BP1Q13283 466 aaKnown RBP eCLIP16.79■□□□□ 0.28
GARNL3-208ENST00000444677 MFSD14BQ5SR56 506 aa16.79■□□□□ 0.28
GARNL3-208ENST00000444677 CEP85Q6P2H3 762 aa16.79■□□□□ 0.28
GARNL3-208ENST00000444677 HDAC9Q9UKV0 1011 aa16.79■□□□□ 0.28
GARNL3-208ENST00000444677 PHKA1P46020 1223 aa16.78■□□□□ 0.28
GARNL3-208ENST00000444677 CFAP100Q494V2 611 aa16.78■□□□□ 0.28
GARNL3-208ENST00000444677 PRAMEF18Q5VWM3 479 aa16.78■□□□□ 0.28
GARNL3-208ENST00000444677 A0A1B0GUL7 405 aa16.77■□□□□ 0.28
GARNL3-208ENST00000444677 ABT1Q9ULW3 272 aaKnown RBP16.77■□□□□ 0.28
GARNL3-208ENST00000444677 ZNF646O15015 1829 aaPredicted RBP16.77■□□□□ 0.27
GARNL3-208ENST00000444677 CNTNAP1P78357 1384 aa16.77■□□□□ 0.27
GARNL3-208ENST00000444677 PCNTO95613 3336 aa16.76■□□□□ 0.27
GARNL3-208ENST00000444677 SURF6O75683 361 aaKnown RBP16.76■□□□□ 0.27
GARNL3-208ENST00000444677 DLGAP5Q15398 846 aa16.76■□□□□ 0.27
GARNL3-208ENST00000444677 CCDC102BQ68D86 513 aa16.76■□□□□ 0.27
GARNL3-208ENST00000444677 SULF1Q8IWU6 871 aa16.76■□□□□ 0.27
GARNL3-208ENST00000444677 XAGE2Q96GT9 111 aa16.76■□□□□ 0.27
GARNL3-208ENST00000444677 PRMT6Q96LA8 375 aaPredicted RBP16.76■□□□□ 0.27
GARNL3-208ENST00000444677 NEUROD6Q96NK8 337 aa16.76■□□□□ 0.27
GARNL3-208ENST00000444677 ZBTB40Q9NUA8 1239 aa16.76■□□□□ 0.27
GARNL3-208ENST00000444677 TTF2Q9UNY4 1162 aaKnown RBP16.76■□□□□ 0.27
GARNL3-208ENST00000444677 POLR2AP24928 1970 aaKnown RBP16.75■□□□□ 0.27
GARNL3-208ENST00000444677 VEGFBP49765 207 aa16.75■□□□□ 0.27
GARNL3-208ENST00000444677 RBM5P52756 815 aaKnown RBP eCLIP16.75■□□□□ 0.27
GARNL3-208ENST00000444677 CDCA5Q96FF9 252 aa16.75■□□□□ 0.27
GARNL3-208ENST00000444677 DDX19BQ9UMR2 479 aa16.75■□□□□ 0.27
GARNL3-208ENST00000444677 COL1A1P02452 1464 aaPredicted RBP16.74■□□□□ 0.27
GARNL3-208ENST00000444677 CLRN2A0PK11 232 aa16.74■□□□□ 0.27
GARNL3-208ENST00000444677 HSPA1AP0DMV8 641 aaKnown RBP16.74■□□□□ 0.27
GARNL3-208ENST00000444677 HSPA1BP0DMV9 641 aaKnown RBP16.74■□□□□ 0.27
GARNL3-208ENST00000444677 OS9Q13438 667 aaPredicted RBP16.74■□□□□ 0.27
GARNL3-208ENST00000444677 PDE3AQ14432 1141 aa16.74■□□□□ 0.27
GARNL3-208ENST00000444677 DEFB115Q30KQ5 88 aa16.74■□□□□ 0.27
GARNL3-208ENST00000444677 SIRT2Q8IXJ6 389 aa16.74■□□□□ 0.27
GARNL3-208ENST00000444677 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.74■□□□□ 0.27
GARNL3-208ENST00000444677 MTMR14Q8NCE2 650 aa16.74■□□□□ 0.27
GARNL3-208ENST00000444677 AKAP2Q9Y2D5 859 aa16.74■□□□□ 0.27
GARNL3-208ENST00000444677 NOP58Q9Y2X3 529 aaKnown RBP16.74■□□□□ 0.27
GARNL3-208ENST00000444677 TLL2Q9Y6L7 1015 aa16.74■□□□□ 0.27
GARNL3-208ENST00000444677 SPDYE2BA6NHP3 402 aa16.73■□□□□ 0.27
GARNL3-208ENST00000444677 RASSF10A6NK89 507 aa16.73■□□□□ 0.27
GARNL3-208ENST00000444677 SPDYE6P0CI01 402 aa16.73■□□□□ 0.27
GARNL3-208ENST00000444677 MMP14P50281 582 aa16.73■□□□□ 0.27
GARNL3-208ENST00000444677 THSD7BQ9C0I4 1608 aa16.73■□□□□ 0.27
GARNL3-208ENST00000444677 PITPNM2Q9BZ72 1349 aa16.72■□□□□ 0.27
GARNL3-208ENST00000444677 CRKP46108 304 aa16.72■□□□□ 0.27
GARNL3-208ENST00000444677 CYP4F22Q6NT55 531 aa16.72■□□□□ 0.27
GARNL3-208ENST00000444677 SAPCD2Q86UD0 394 aa16.72■□□□□ 0.27
GARNL3-208ENST00000444677 TBC1D22AQ8WUA7 517 aa16.72■□□□□ 0.27
GARNL3-208ENST00000444677 GNL3LQ9NVN8 582 aaKnown RBP16.72■□□□□ 0.27
GARNL3-208ENST00000444677 EXOC6BQ9Y2D4 811 aa16.72■□□□□ 0.27
GARNL3-208ENST00000444677 GRM1Q13255 1194 aa16.71■□□□□ 0.27
GARNL3-208ENST00000444677 RASGRF1Q13972 1273 aa16.71■□□□□ 0.27
GARNL3-208ENST00000444677 TNNI3KQ59H18 835 aa16.71■□□□□ 0.27
GARNL3-208ENST00000444677 IFFO2Q5TF58 517 aa16.71■□□□□ 0.27
GARNL3-208ENST00000444677 PAXIP1Q6ZW49 1069 aaPredicted RBP16.71■□□□□ 0.27
GARNL3-208ENST00000444677 MOB2Q70IA6 237 aa16.71■□□□□ 0.27
GARNL3-208ENST00000444677 WDR66Q8TBY9 1149 aa16.71■□□□□ 0.27
GARNL3-208ENST00000444677 TDRD3Q9H7E2 651 aaKnown RBP16.71■□□□□ 0.27
GARNL3-208ENST00000444677 GBA2Q9HCG7 927 aaPredicted RBP16.71■□□□□ 0.27
GARNL3-208ENST00000444677 SERPINA10Q9UK55 444 aa16.71■□□□□ 0.27
GARNL3-208ENST00000444677 FPGT-TNNI3KV9GXZ4 949 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms