RNA–Protein interactions for RNA: ENST00000444272.1

SYNCRIP-203, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 3

Gene SYNCRIP, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-203ENST00000444272 DACT2Q5SW24 774 aa18.94■□□□□ 0.62
SYNCRIP-203ENST00000444272 CNKSR2Q8WXI2 1034 aa18.94■□□□□ 0.62
SYNCRIP-203ENST00000444272 THUMPD2Q9BTF0 503 aaKnown RBP18.94■□□□□ 0.62
SYNCRIP-203ENST00000444272 HOXD10P28358 340 aa18.93■□□□□ 0.62
SYNCRIP-203ENST00000444272 GTF2A2P52657 109 aa18.93■□□□□ 0.62
SYNCRIP-203ENST00000444272 RPS8P62241 208 aaKnown RBP18.93■□□□□ 0.62
SYNCRIP-203ENST00000444272 NECAB2Q7Z6G3 386 aa18.93■□□□□ 0.62
SYNCRIP-203ENST00000444272 DIS3LQ8TF46 1054 aaKnown RBP18.93■□□□□ 0.62
SYNCRIP-203ENST00000444272 DEFB118Q96PH6 123 aa18.93■□□□□ 0.62
SYNCRIP-203ENST00000444272 COL2A1P02458 1487 aaPredicted RBP18.92■□□□□ 0.62
SYNCRIP-203ENST00000444272 SF3B3Q15393 1217 aaKnown RBP18.92■□□□□ 0.62
SYNCRIP-203ENST00000444272 SUPT20HL1Q3ZLR7 823 aa18.92■□□□□ 0.62
SYNCRIP-203ENST00000444272 NBPF12Q5TAG4 269 aaPredicted RBP18.92■□□□□ 0.62
SYNCRIP-203ENST00000444272 MYO3BQ8WXR4 1341 aa18.92■□□□□ 0.62
SYNCRIP-203ENST00000444272 FMNL1O95466 1100 aaPredicted RBP18.91■□□□□ 0.62
SYNCRIP-203ENST00000444272 TAF7Q15545 349 aaPredicted RBP18.91■□□□□ 0.62
SYNCRIP-203ENST00000444272 HSP90AB3PQ58FF7 597 aa18.91■□□□□ 0.62
SYNCRIP-203ENST00000444272 ZBED3Q96IU2 234 aaPredicted RBP18.91■□□□□ 0.62
SYNCRIP-203ENST00000444272 PPP2R3BQ9Y5P8 575 aa18.91■□□□□ 0.62
SYNCRIP-203ENST00000444272 ECM29Q5VYK3 1845 aa18.9■□□□□ 0.62
SYNCRIP-203ENST00000444272 COL3A1P02461 1466 aaPredicted RBP18.9■□□□□ 0.62
SYNCRIP-203ENST00000444272 PRKAR2BP31323 418 aa18.9■□□□□ 0.62
SYNCRIP-203ENST00000444272 MYLIPQ8WY64 445 aa18.9■□□□□ 0.62
SYNCRIP-203ENST00000444272 KIAA0825Q8IV33 1275 aa18.89■□□□□ 0.61
SYNCRIP-203ENST00000444272 SLAIN1Q8ND83 568 aa18.89■□□□□ 0.61
SYNCRIP-203ENST00000444272 KNSTRNQ9Y448 316 aa18.89■□□□□ 0.61
SYNCRIP-203ENST00000444272 CAPN2P17655 700 aa18.88■□□□□ 0.61
SYNCRIP-203ENST00000444272 PRKCZQ05513 592 aa18.88■□□□□ 0.61
SYNCRIP-203ENST00000444272 LRP10Q7Z4F1 713 aa18.88■□□□□ 0.61
SYNCRIP-203ENST00000444272 CPA4Q9UI42 421 aa18.88■□□□□ 0.61
SYNCRIP-203ENST00000444272 FAM205AQ6ZU69 1335 aa18.88■□□□□ 0.61
SYNCRIP-203ENST00000444272 MMP14P50281 582 aa18.87■□□□□ 0.61
SYNCRIP-203ENST00000444272 C17orf99Q6UX52 265 aa18.87■□□□□ 0.61
SYNCRIP-203ENST00000444272 HELBQ8NG08 1087 aaPredicted RBP18.87■□□□□ 0.61
SYNCRIP-203ENST00000444272 ZNF804BA4D1E1 1349 aa18.86■□□□□ 0.61
SYNCRIP-203ENST00000444272 BTBD19C9JJ37 291 aa18.86■□□□□ 0.61
SYNCRIP-203ENST00000444272 EIF4A1P60842 406 aaKnown RBP18.86■□□□□ 0.61
SYNCRIP-203ENST00000444272 STRIP1Q5VSL9 837 aa18.86■□□□□ 0.61
SYNCRIP-203ENST00000444272 FAM89AQ96GI7 184 aa18.86■□□□□ 0.61
SYNCRIP-203ENST00000444272 CRISPLD2Q9H0B8 497 aa18.86■□□□□ 0.61
SYNCRIP-203ENST00000444272 BDP1A6H8Y1 2624 aa18.85■□□□□ 0.61
SYNCRIP-203ENST00000444272 ANXA1P04083 346 aa18.85■□□□□ 0.61
SYNCRIP-203ENST00000444272 INHAP05111 366 aa18.85■□□□□ 0.61
SYNCRIP-203ENST00000444272 FOSL2P15408 326 aa18.85■□□□□ 0.61
SYNCRIP-203ENST00000444272 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.85■□□□□ 0.61
SYNCRIP-203ENST00000444272 ZCCHC17Q9NP64 241 aaKnown RBP18.85■□□□□ 0.61
SYNCRIP-203ENST00000444272 SEC31BQ9NQW1 1179 aa18.85■□□□□ 0.61
SYNCRIP-203ENST00000444272 CACNA1AO00555 2505 aa18.85■□□□□ 0.61
SYNCRIP-203ENST00000444272 PIEZO1Q92508 2521 aa18.85■□□□□ 0.61
SYNCRIP-203ENST00000444272 XDHP47989 1333 aa18.84■□□□□ 0.61
SYNCRIP-203ENST00000444272 ADGRA2Q96PE1 1338 aa18.84■□□□□ 0.61
SYNCRIP-203ENST00000444272 CLRN2A0PK11 232 aa18.84■□□□□ 0.61
SYNCRIP-203ENST00000444272 MDM2Q00987 491 aaPredicted RBP18.84■□□□□ 0.61
SYNCRIP-203ENST00000444272 DLGAP5Q15398 846 aa18.84■□□□□ 0.61
SYNCRIP-203ENST00000444272 PROSER3Q2NL68 480 aa18.84■□□□□ 0.61
SYNCRIP-203ENST00000444272 RSPH6AQ9H0K4 717 aa18.84■□□□□ 0.61
SYNCRIP-203ENST00000444272 SEMA6BQ9H3T3 888 aa18.84■□□□□ 0.61
SYNCRIP-203ENST00000444272 PAK6Q9NQU5 681 aaPredicted RBP18.84■□□□□ 0.61
SYNCRIP-203ENST00000444272 MGAMO43451 1857 aa18.84■□□□□ 0.61
SYNCRIP-203ENST00000444272 ELNP15502 786 aa18.83■□□□□ 0.6
SYNCRIP-203ENST00000444272 AIMP1Q12904 312 aaKnown RBP18.83■□□□□ 0.6
SYNCRIP-203ENST00000444272 VGLL4Q14135 290 aa18.83■□□□□ 0.6
SYNCRIP-203ENST00000444272 PDIA6Q15084 440 aa18.83■□□□□ 0.6
SYNCRIP-203ENST00000444272 RTL5Q5HYW3 569 aaPredicted RBP18.83■□□□□ 0.6
SYNCRIP-203ENST00000444272 VEZTQ9HBM0 779 aa18.83■□□□□ 0.6
SYNCRIP-203ENST00000444272 GABRQQ9UN88 632 aa18.83■□□□□ 0.6
SYNCRIP-203ENST00000444272 PCDHAC2Q9Y5I4 1007 aa18.83■□□□□ 0.6
SYNCRIP-203ENST00000444272 DDX60LQ5H9U9 1706 aaKnown RBP18.83■□□□□ 0.6
SYNCRIP-203ENST00000444272 ADCY3O60266 1144 aa18.82■□□□□ 0.6
SYNCRIP-203ENST00000444272 CETPP11597 493 aa18.82■□□□□ 0.6
SYNCRIP-203ENST00000444272 ATP2B4P23634 1241 aa18.82■□□□□ 0.6
SYNCRIP-203ENST00000444272 AMER1Q5JTC6 1135 aaPredicted RBP18.82■□□□□ 0.6
SYNCRIP-203ENST00000444272 ARIH1Q9Y4X5 557 aaPredicted RBP18.82■□□□□ 0.6
SYNCRIP-203ENST00000444272 MED23Q9ULK4 1368 aa18.81■□□□□ 0.6
SYNCRIP-203ENST00000444272 COPS6Q7L5N1 327 aa18.81■□□□□ 0.6
SYNCRIP-203ENST00000444272 HCN4Q9Y3Q4 1203 aa18.81■□□□□ 0.6
SYNCRIP-203ENST00000444272 RASA3Q14644 834 aa18.8■□□□□ 0.6
SYNCRIP-203ENST00000444272 ALYREFQ86V81 257 aaKnown RBP18.8■□□□□ 0.6
SYNCRIP-203ENST00000444272 ANKLE1Q8NAG6 615 aa18.8■□□□□ 0.6
SYNCRIP-203ENST00000444272 NBPF3Q9H094 633 aa18.8■□□□□ 0.6
SYNCRIP-203ENST00000444272 HTATSF1O43719 755 aaKnown RBP18.79■□□□□ 0.6
SYNCRIP-203ENST00000444272 MYO1BO43795 1136 aa18.79■□□□□ 0.6
SYNCRIP-203ENST00000444272 EIF2S2P20042 333 aaKnown RBP18.79■□□□□ 0.6
SYNCRIP-203ENST00000444272 FCGRTP55899 365 aa18.79■□□□□ 0.6
SYNCRIP-203ENST00000444272 TTLL5Q6EMB2 1281 aa18.79■□□□□ 0.6
SYNCRIP-203ENST00000444272 USP38Q8NB14 1042 aa18.79■□□□□ 0.6
SYNCRIP-203ENST00000444272 PNISRQ8TF01 805 aaKnown RBP18.79■□□□□ 0.6
SYNCRIP-203ENST00000444272 NCOR1O75376 2440 aa18.78■□□□□ 0.6
SYNCRIP-203ENST00000444272 IRS4O14654 1257 aaPredicted RBP18.78■□□□□ 0.6
SYNCRIP-203ENST00000444272 XAGE3Q8WTP9 111 aa18.78■□□□□ 0.6
SYNCRIP-203ENST00000444272 C11orf49Q9H6J7 331 aa18.78■□□□□ 0.6
SYNCRIP-203ENST00000444272 CSADQ9Y600 493 aa18.78■□□□□ 0.6
SYNCRIP-203ENST00000444272 AOX1Q06278 1338 aa18.77■□□□□ 0.6
SYNCRIP-203ENST00000444272 MAP3K9P80192 1104 aa18.77■□□□□ 0.6
SYNCRIP-203ENST00000444272 TTYH1Q9H313 450 aaPredicted RBP18.77■□□□□ 0.6
SYNCRIP-203ENST00000444272 DNAH12Q6ZR08 3092 aa18.77■□□□□ 0.59
SYNCRIP-203ENST00000444272 SPDYE5A6NIY4 337 aa18.76■□□□□ 0.59
SYNCRIP-203ENST00000444272 SNAPC2Q13487 334 aa18.76■□□□□ 0.59
SYNCRIP-203ENST00000444272 MTMR14Q8NCE2 650 aa18.76■□□□□ 0.59
SYNCRIP-203ENST00000444272 ADAMTS19Q8TE59 1207 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms