RNA–Protein interactions for RNA: ENST00000442677.3

CDH23-207, Transcript of cadherin related 23, humanhuman

TSL 5

Gene CDH23, Length 7,000 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-207ENST00000442677 PRDM11Q9NQV5 511 aa17.66■□□□□ 0.42
CDH23-207ENST00000442677 RABGAP1Q9Y3P9 1069 aa17.66■□□□□ 0.42
CDH23-207ENST00000442677 RBM8AQ9Y5S9 174 aaKnown RBP17.66■□□□□ 0.42
CDH23-207ENST00000442677 CCDC26Q8TAB7 109 aa17.66■□□□□ 0.42
CDH23-207ENST00000442677 GSDMBQ8TAX9 411 aa17.66■□□□□ 0.42
CDH23-207ENST00000442677 SEL1L2Q5TEA6 688 aa17.66■□□□□ 0.42
CDH23-207ENST00000442677 JAKMIP2Q96AA8 810 aa17.66■□□□□ 0.42
CDH23-207ENST00000442677 AQRO60306 1485 aaKnown RBP eCLIP17.66■□□□□ 0.42
CDH23-207ENST00000442677 NUCB1Q02818 461 aa17.66■□□□□ 0.42
CDH23-207ENST00000442677 LRRC43Q8N309 656 aa17.66■□□□□ 0.42
CDH23-207ENST00000442677 TMOD3Q9NYL9 352 aa17.66■□□□□ 0.42
CDH23-207ENST00000442677 ATP5J2-PTCD1G3V325 749 aa17.66■□□□□ 0.42
CDH23-207ENST00000442677 RRAGDQ9NQL2 400 aaPredicted RBP17.66■□□□□ 0.42
CDH23-207ENST00000442677 AKR1B15C9JRZ8 316 aaPredicted RBP17.65■□□□□ 0.42
CDH23-207ENST00000442677 DCAF17Q5H9S7 520 aaPredicted RBP17.65■□□□□ 0.42
CDH23-207ENST00000442677 CARD6Q9BX69 1037 aa17.65■□□□□ 0.42
CDH23-207ENST00000442677 PTPRCP08575 1304 aa17.65■□□□□ 0.42
CDH23-207ENST00000442677 TRIM68Q6AZZ1 485 aa17.65■□□□□ 0.42
CDH23-207ENST00000442677 SUDS3Q9H7L9 328 aaPredicted RBP17.65■□□□□ 0.42
CDH23-207ENST00000442677 TACC3Q9Y6A5 838 aa17.65■□□□□ 0.42
CDH23-207ENST00000442677 MTUS1Q9ULD2 1270 aa17.65■□□□□ 0.42
CDH23-207ENST00000442677 TSPY3P0CV98 308 aa17.65■□□□□ 0.42
CDH23-207ENST00000442677 TSPY8P0CW00 308 aa17.65■□□□□ 0.42
CDH23-207ENST00000442677 CTNND2Q9UQB3 1225 aa17.65■□□□□ 0.42
CDH23-207ENST00000442677 MAP2K2P36507 400 aa17.64■□□□□ 0.42
CDH23-207ENST00000442677 SLF2Q8IX21 1173 aa17.64■□□□□ 0.42
CDH23-207ENST00000442677 SBNO2Q9Y2G9 1366 aa17.64■□□□□ 0.42
CDH23-207ENST00000442677 KIAA1107Q9UPP5 1409 aa17.64■□□□□ 0.42
CDH23-207ENST00000442677 CCDC14Q49A88 953 aa17.64■□□□□ 0.41
CDH23-207ENST00000442677 USP37Q86T82 979 aa17.64■□□□□ 0.41
CDH23-207ENST00000442677 TRIM31Q9BZY9 425 aa17.64■□□□□ 0.41
CDH23-207ENST00000442677 RPGRQ92834 1020 aaKnown RBP17.64■□□□□ 0.41
CDH23-207ENST00000442677 UTP11Q9Y3A2 253 aaKnown RBP17.64■□□□□ 0.41
CDH23-207ENST00000442677 VCXQ9H320 206 aa17.64■□□□□ 0.41
CDH23-207ENST00000442677 ZBTB3Q9H5J0 574 aa17.64■□□□□ 0.41
CDH23-207ENST00000442677 BAIAP2L1Q9UHR4 511 aa17.64■□□□□ 0.41
CDH23-207ENST00000442677 AGTPBP1Q9UPW5 1226 aa17.64■□□□□ 0.41
CDH23-207ENST00000442677 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.64■□□□□ 0.41
CDH23-207ENST00000442677 PPANQ9NQ55 473 aaKnown RBP17.64■□□□□ 0.41
CDH23-207ENST00000442677 DDX21Q9NR30 783 aaKnown RBP eCLIP17.64■□□□□ 0.41
CDH23-207ENST00000442677 E7EVH7 732 aa17.64■□□□□ 0.41
CDH23-207ENST00000442677 GCKP35557 465 aa17.64■□□□□ 0.41
CDH23-207ENST00000442677 INF2Q27J81 1249 aa17.64■□□□□ 0.41
CDH23-207ENST00000442677 KIAA1524Q8TCG1 905 aa17.64■□□□□ 0.41
CDH23-207ENST00000442677 CLUL1Q15846 466 aa17.63■□□□□ 0.41
CDH23-207ENST00000442677 C8orf74Q6P047 294 aa17.63■□□□□ 0.41
CDH23-207ENST00000442677 CCDC62Q6P9F0 684 aa17.63■□□□□ 0.41
CDH23-207ENST00000442677 NAPGQ99747 312 aaPredicted RBP17.63■□□□□ 0.41
CDH23-207ENST00000442677 IMPG2Q9BZV3 1241 aa17.63■□□□□ 0.41
CDH23-207ENST00000442677 OAS2P29728 719 aaKnown RBP17.63■□□□□ 0.41
CDH23-207ENST00000442677 VSIG1Q86XK7 387 aa17.63■□□□□ 0.41
CDH23-207ENST00000442677 HS1BP3Q53T59 392 aa17.63■□□□□ 0.41
CDH23-207ENST00000442677 RNF10Q8N5U6 811 aaKnown RBP17.63■□□□□ 0.41
CDH23-207ENST00000442677 BICDL2A1A5D9 508 aa17.63■□□□□ 0.41
CDH23-207ENST00000442677 CCDC38Q502W7 563 aa17.63■□□□□ 0.41
CDH23-207ENST00000442677 LDHAL6AQ6ZMR3 332 aa17.63■□□□□ 0.41
CDH23-207ENST00000442677 ZGPATQ8N5A5 531 aaKnown RBP17.63■□□□□ 0.41
CDH23-207ENST00000442677 LEO1Q8WVC0 666 aaPredicted RBP17.63■□□□□ 0.41
CDH23-207ENST00000442677 ESYT1Q9BSJ8 1104 aa17.63■□□□□ 0.41
CDH23-207ENST00000442677 LONRF3Q496Y0 759 aa17.62■□□□□ 0.41
CDH23-207ENST00000442677 NAPAP54920 295 aa17.62■□□□□ 0.41
CDH23-207ENST00000442677 ERCC6LQ2NKX8 1250 aa17.62■□□□□ 0.41
CDH23-207ENST00000442677 CEP128Q6ZU80 1094 aa17.62■□□□□ 0.41
CDH23-207ENST00000442677 MICAL1Q8TDZ2 1067 aa17.62■□□□□ 0.41
CDH23-207ENST00000442677 FRMD3A2A2Y4 597 aa17.62■□□□□ 0.41
CDH23-207ENST00000442677 BMP15O95972 392 aa17.62■□□□□ 0.41
CDH23-207ENST00000442677 KRT5P13647 590 aa17.62■□□□□ 0.41
CDH23-207ENST00000442677 TPX2Q9ULW0 747 aaKnown RBP17.62■□□□□ 0.41
CDH23-207ENST00000442677 RAB3GAP1Q15042 981 aa17.62■□□□□ 0.41
CDH23-207ENST00000442677 GPR161Q8N6U8 529 aaKnown RBP17.62■□□□□ 0.41
CDH23-207ENST00000442677 C6orf229H3BNL8 230 aa17.61■□□□□ 0.41
CDH23-207ENST00000442677 PPP2R5CQ13362 524 aa17.61■□□□□ 0.41
CDH23-207ENST00000442677 MAP7Q14244 749 aa17.61■□□□□ 0.41
CDH23-207ENST00000442677 PRR16Q569H4 304 aa17.61■□□□□ 0.41
CDH23-207ENST00000442677 MGARPQ8TDB4 240 aa17.61■□□□□ 0.41
CDH23-207ENST00000442677 GBP5Q96PP8 586 aa17.61■□□□□ 0.41
CDH23-207ENST00000442677 SMARCA4P51532 1647 aa17.61■□□□□ 0.41
CDH23-207ENST00000442677 TCHPQ9BT92 498 aa17.61■□□□□ 0.41
CDH23-207ENST00000442677 KRT23Q9C075 422 aa17.61■□□□□ 0.41
CDH23-207ENST00000442677 C16orf71Q8IYS4 520 aaPredicted RBP17.61■□□□□ 0.41
CDH23-207ENST00000442677 KRT9P35527 623 aa17.61■□□□□ 0.41
CDH23-207ENST00000442677 RBSNQ9H1K0 784 aa17.61■□□□□ 0.41
CDH23-207ENST00000442677 CFTRP13569 1480 aa17.61■□□□□ 0.41
CDH23-207ENST00000442677 WDHD1O75717 1129 aaPredicted RBP17.61■□□□□ 0.41
CDH23-207ENST00000442677 SLC4A4Q9Y6R1 1079 aa17.61■□□□□ 0.41
CDH23-207ENST00000442677 BAG3O95817 575 aa17.61■□□□□ 0.41
CDH23-207ENST00000442677 PEX19P40855 299 aa17.61■□□□□ 0.41
CDH23-207ENST00000442677 PLEKHA4Q9H4M7 779 aa17.61■□□□□ 0.41
CDH23-207ENST00000442677 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.6■□□□□ 0.41
CDH23-207ENST00000442677 VPS16Q9H269 839 aa17.6■□□□□ 0.41
CDH23-207ENST00000442677 CABS1Q96KC9 395 aa17.6■□□□□ 0.41
CDH23-207ENST00000442677 CABP5Q9NP86 173 aa17.6■□□□□ 0.41
CDH23-207ENST00000442677 DHX29Q7Z478 1369 aaKnown RBP17.6■□□□□ 0.41
CDH23-207ENST00000442677 GOLGA6BA6NDN3 693 aa17.6■□□□□ 0.41
CDH23-207ENST00000442677 KRT2P35908 639 aa17.6■□□□□ 0.41
CDH23-207ENST00000442677 CNGA4Q8IV77 575 aa17.6■□□□□ 0.41
CDH23-207ENST00000442677 RNF168Q8IYW5 571 aaPredicted RBP17.6■□□□□ 0.41
CDH23-207ENST00000442677 ZBTB21Q9ULJ3 1066 aa17.6■□□□□ 0.41
CDH23-207ENST00000442677 A0A1B0GVL5 298 aa17.6■□□□□ 0.41
CDH23-207ENST00000442677 SH2D4BQ5SQS7 431 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms