RNA–Protein interactions for RNA: ENST00000442218.2

SLC48A1-201, Transcript of solute carrier family 48 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC48A1, Length 3,010 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-201ENST00000442218 ADAMTS2O95450 1211 aa15.35■□□□□ 0.05
SLC48A1-201ENST00000442218 NDUFA8P51970 172 aa15.35■□□□□ 0.05
SLC48A1-201ENST00000442218 CASP7P55210 303 aa15.35■□□□□ 0.05
SLC48A1-201ENST00000442218 KRT32Q14532 448 aa15.35■□□□□ 0.05
SLC48A1-201ENST00000442218 IQCB1Q15051 598 aa15.35■□□□□ 0.05
SLC48A1-201ENST00000442218 DPCR1Q3MIW9 517 aa15.35■□□□□ 0.05
SLC48A1-201ENST00000442218 TDRD7Q8NHU6 1098 aaKnown RBP15.35■□□□□ 0.05
SLC48A1-201ENST00000442218 PCDHA7Q9UN72 937 aa15.35■□□□□ 0.05
SLC48A1-201ENST00000442218 AHDC1Q5TGY3 1603 aaPredicted RBP15.35■□□□□ 0.05
SLC48A1-201ENST00000442218 ZSCAN20P17040 1043 aaPredicted RBP15.35■□□□□ 0.05
SLC48A1-201ENST00000442218 PDIA3P30101 505 aaKnown RBP15.35■□□□□ 0.05
SLC48A1-201ENST00000442218 SNW1Q13573 536 aaKnown RBP15.35■□□□□ 0.05
SLC48A1-201ENST00000442218 CCDC112Q8NEF3 446 aa15.35■□□□□ 0.05
SLC48A1-201ENST00000442218 MRC1P22897 1456 aa15.35■□□□□ 0.05
SLC48A1-201ENST00000442218 USPL1Q5W0Q7 1092 aa15.34■□□□□ 0.05
SLC48A1-201ENST00000442218 CCDC82Q8N4S0 544 aa15.34■□□□□ 0.05
SLC48A1-201ENST00000442218 MYL10Q9BUA6 226 aa15.34■□□□□ 0.05
SLC48A1-201ENST00000442218 FDPSP14324 419 aaKnown RBP15.34■□□□□ 0.05
SLC48A1-201ENST00000442218 CEP135Q66GS9 1140 aa15.34■□□□□ 0.05
SLC48A1-201ENST00000442218 LRRC8AQ8IWT6 810 aa15.34■□□□□ 0.05
SLC48A1-201ENST00000442218 STK38Q15208 465 aa15.33■□□□□ 0.05
SLC48A1-201ENST00000442218 SPECC1Q5M775 1068 aa15.33■□□□□ 0.05
SLC48A1-201ENST00000442218 MTERF4Q7Z6M4 381 aaKnown RBP15.33■□□□□ 0.05
SLC48A1-201ENST00000442218 FAM177A1Q8N128 213 aaPredicted RBP15.33■□□□□ 0.05
SLC48A1-201ENST00000442218 PLEKHG2Q9H7P9 1386 aa15.33■□□□□ 0.05
SLC48A1-201ENST00000442218 KLF18A0A0U1RQI7 1052 aa15.33■□□□□ 0.04
SLC48A1-201ENST00000442218 PFKFB2O60825 505 aa15.33■□□□□ 0.04
SLC48A1-201ENST00000442218 LMOD1P29536 600 aaPredicted RBP15.33■□□□□ 0.04
SLC48A1-201ENST00000442218 GTF2F1P35269 517 aaKnown RBP eCLIP15.33■□□□□ 0.04
SLC48A1-201ENST00000442218 DHX40Q8IX18 779 aaKnown RBP15.33■□□□□ 0.04
SLC48A1-201ENST00000442218 HELBQ8NG08 1087 aaPredicted RBP15.33■□□□□ 0.04
SLC48A1-201ENST00000442218 PLBD2Q8NHP8 589 aa15.33■□□□□ 0.04
SLC48A1-201ENST00000442218 ZNF215Q9UL58 517 aaPredicted RBP15.33■□□□□ 0.04
SLC48A1-201ENST00000442218 SHANK3Q9BYB0 1731 aa15.33■□□□□ 0.04
SLC48A1-201ENST00000442218 GOLGA8BA8MQT2 603 aa15.33■□□□□ 0.04
SLC48A1-201ENST00000442218 APPP05067 770 aa15.33■□□□□ 0.04
SLC48A1-201ENST00000442218 DNAJC10Q8IXB1 793 aa15.33■□□□□ 0.04
SLC48A1-201ENST00000442218 LRRN4CLQ8ND94 238 aa15.33■□□□□ 0.04
SLC48A1-201ENST00000442218 STX1AQ16623 288 aa15.32■□□□□ 0.04
SLC48A1-201ENST00000442218 COL16A1Q07092 1604 aaPredicted RBP15.32■□□□□ 0.04
SLC48A1-201ENST00000442218 NUTM2BA6NNL0 878 aaPredicted RBP15.32■□□□□ 0.04
SLC48A1-201ENST00000442218 NUTM2EB1AL46 878 aaPredicted RBP15.32■□□□□ 0.04
SLC48A1-201ENST00000442218 ZRSR1Q15695 479 aaKnown RBP15.32■□□□□ 0.04
SLC48A1-201ENST00000442218 TMC6Q7Z403 805 aa15.32■□□□□ 0.04
SLC48A1-201ENST00000442218 NUTM2AQ8IVF1 878 aaPredicted RBP15.32■□□□□ 0.04
SLC48A1-201ENST00000442218 PUS7LQ9H0K6 701 aaKnown RBP15.32■□□□□ 0.04
SLC48A1-201ENST00000442218 SENP2Q9HC62 589 aa15.32■□□□□ 0.04
SLC48A1-201ENST00000442218 ST7Q9NRC1 585 aa15.32■□□□□ 0.04
SLC48A1-201ENST00000442218 KIF28PB7ZC32 967 aa15.31■□□□□ 0.04
SLC48A1-201ENST00000442218 NKX1-1Q15270 411 aaPredicted RBP15.31■□□□□ 0.04
SLC48A1-201ENST00000442218 PHKBQ93100 1093 aa15.31■□□□□ 0.04
SLC48A1-201ENST00000442218 CWC25Q9NXE8 425 aaPredicted RBP15.31■□□□□ 0.04
SLC48A1-201ENST00000442218 IFNKQ9P0W0 207 aa15.31■□□□□ 0.04
SLC48A1-201ENST00000442218 CPLX1O14810 134 aa15.31■□□□□ 0.04
SLC48A1-201ENST00000442218 ATP2B1P20020 1258 aa15.31■□□□□ 0.04
SLC48A1-201ENST00000442218 HLFQ16534 295 aa15.31■□□□□ 0.04
SLC48A1-201ENST00000442218 TAF7LQ5H9L4 462 aa15.31■□□□□ 0.04
SLC48A1-201ENST00000442218 ORC3Q9UBD5 711 aaPredicted RBP15.31■□□□□ 0.04
SLC48A1-201ENST00000442218 N4BP2Q86UW6 1770 aaPredicted RBP15.31■□□□□ 0.04
SLC48A1-201ENST00000442218 ATP1A3P13637 1013 aa15.3■□□□□ 0.04
SLC48A1-201ENST00000442218 ZAP70P43403 619 aa15.3■□□□□ 0.04
SLC48A1-201ENST00000442218 SMARCC2Q8TAQ2 1214 aa15.3■□□□□ 0.04
SLC48A1-201ENST00000442218 ZSCAN16Q9H4T2 348 aaPredicted RBP15.3■□□□□ 0.04
SLC48A1-201ENST00000442218 ERVV-2B6SEH9 535 aa15.3■□□□□ 0.04
SLC48A1-201ENST00000442218 TPM3P06753 285 aa15.3■□□□□ 0.04
SLC48A1-201ENST00000442218 PTPN14Q15678 1187 aa15.3■□□□□ 0.04
SLC48A1-201ENST00000442218 ELF2Q15723 593 aa15.3■□□□□ 0.04
SLC48A1-201ENST00000442218 RABL6Q3YEC7 729 aaPredicted RBP15.3■□□□□ 0.04
SLC48A1-201ENST00000442218 SMAP1Q8IYB5 467 aaPredicted RBP15.3■□□□□ 0.04
SLC48A1-201ENST00000442218 C8orf76Q96K31 380 aa15.3■□□□□ 0.04
SLC48A1-201ENST00000442218 PHLPP1O60346 1717 aa15.3■□□□□ 0.04
SLC48A1-201ENST00000442218 CARMIL3Q8ND23 1372 aa15.3■□□□□ 0.04
SLC48A1-201ENST00000442218 FAM160A1Q05DH4 1040 aa15.3■□□□□ 0.04
SLC48A1-201ENST00000442218 TSGA10IPQ3SY00 556 aa15.3■□□□□ 0.04
SLC48A1-201ENST00000442218 TTC39AQ5SRH9 613 aa15.3■□□□□ 0.04
SLC48A1-201ENST00000442218 RBM43Q6ZSC3 357 aaKnown RBP15.3■□□□□ 0.04
SLC48A1-201ENST00000442218 XPO4Q9C0E2 1151 aaKnown RBP15.3■□□□□ 0.04
SLC48A1-201ENST00000442218 RCOR1Q9UKL0 485 aa15.3■□□□□ 0.04
SLC48A1-201ENST00000442218 COL14A1Q05707 1796 aaKnown RBP15.29■□□□□ 0.04
SLC48A1-201ENST00000442218 PRC1O43663 620 aa15.29■□□□□ 0.04
SLC48A1-201ENST00000442218 FGAP02671 866 aa15.29■□□□□ 0.04
SLC48A1-201ENST00000442218 SMIM5Q71RC9 77 aa15.29■□□□□ 0.04
SLC48A1-201ENST00000442218 CLIC6Q96NY7 704 aa15.29■□□□□ 0.04
SLC48A1-201ENST00000442218 UTRNP46939 3433 aa15.29■□□□□ 0.04
SLC48A1-201ENST00000442218 COL22A1Q8NFW1 1626 aaPredicted RBP15.29■□□□□ 0.04
SLC48A1-201ENST00000442218 H7C1W4 665 aa15.29■□□□□ 0.04
SLC48A1-201ENST00000442218 RNF113AO15541 343 aaKnown RBP15.29■□□□□ 0.04
SLC48A1-201ENST00000442218 EXOSC10Q01780 885 aaKnown RBP15.29■□□□□ 0.04
SLC48A1-201ENST00000442218 MICU3Q86XE3 530 aa15.29■□□□□ 0.04
SLC48A1-201ENST00000442218 CMTR1Q8N1G2 835 aaKnown RBP15.29■□□□□ 0.04
SLC48A1-201ENST00000442218 TBC1D2BQ9UPU7 963 aa15.29■□□□□ 0.04
SLC48A1-201ENST00000442218 ZMYM1Q5SVZ6 1142 aa15.28■□□□□ 0.04
SLC48A1-201ENST00000442218 CEP57L1Q8IYX8 460 aa15.28■□□□□ 0.04
SLC48A1-201ENST00000442218 MRPS27Q92552 414 aaKnown RBP15.28■□□□□ 0.04
SLC48A1-201ENST00000442218 GLI3P10071 1580 aa15.28■□□□□ 0.04
SLC48A1-201ENST00000442218 ENGASEQ8NFI3 743 aa15.28■□□□□ 0.04
SLC48A1-201ENST00000442218 CHMP4CQ96CF2 233 aa15.28■□□□□ 0.04
SLC48A1-201ENST00000442218 PALLDQ8WX93 1383 aa15.28■□□□□ 0.04
SLC48A1-201ENST00000442218 SMTNL1A8MU46 457 aa15.27■□□□□ 0.04
SLC48A1-201ENST00000442218 IDH1O75874 414 aaKnown RBP15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms