RNA–Protein interactions for RNA: ENST00000441915.5

SEMA3B-207, Transcript of semaphorin 3B, humanhuman

TSL 1 (best)

Gene SEMA3B, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-207ENST00000441915 LRRC8AQ8IWT6 810 aa19.26■□□□□ 0.67
SEMA3B-207ENST00000441915 CEP57L1Q8IYX8 460 aa19.26■□□□□ 0.67
SEMA3B-207ENST00000441915 XAGE2Q96GT9 111 aa19.26■□□□□ 0.67
SEMA3B-207ENST00000441915 NAT10Q9H0A0 1025 aaKnown RBP19.26■□□□□ 0.67
SEMA3B-207ENST00000441915 PCDHA7Q9UN72 937 aa19.26■□□□□ 0.67
SEMA3B-207ENST00000441915 TNNT1P13805 278 aa19.25■□□□□ 0.67
SEMA3B-207ENST00000441915 HAND2P61296 217 aa19.25■□□□□ 0.67
SEMA3B-207ENST00000441915 SF3A1Q15459 793 aaKnown RBP19.25■□□□□ 0.67
SEMA3B-207ENST00000441915 C8orf76Q96K31 380 aa19.25■□□□□ 0.67
SEMA3B-207ENST00000441915 SDF4Q9BRK5 362 aa19.25■□□□□ 0.67
SEMA3B-207ENST00000441915 UBR2Q8IWV8 1755 aa19.25■□□□□ 0.67
SEMA3B-207ENST00000441915 WDR17Q8IZU2 1322 aa19.25■□□□□ 0.67
SEMA3B-207ENST00000441915 FGAP02671 866 aa19.24■□□□□ 0.67
SEMA3B-207ENST00000441915 TPD52L1Q16890 204 aaPredicted RBP19.24■□□□□ 0.67
SEMA3B-207ENST00000441915 ISCA1Q9BUE6 129 aa19.24■□□□□ 0.67
SEMA3B-207ENST00000441915 ADORA1P30542 326 aa19.24■□□□□ 0.67
SEMA3B-207ENST00000441915 DHX40Q8IX18 779 aaKnown RBP19.24■□□□□ 0.67
SEMA3B-207ENST00000441915 FMR1NBQ8N0W7 255 aaPredicted RBP19.24■□□□□ 0.67
SEMA3B-207ENST00000441915 GPHNQ9NQX3 736 aaPredicted RBP19.24■□□□□ 0.67
SEMA3B-207ENST00000441915 KCPQ6ZWJ8 1503 aa19.24■□□□□ 0.67
SEMA3B-207ENST00000441915 A0A1W2PQ27 194 aa19.24■□□□□ 0.67
SEMA3B-207ENST00000441915 A0A1W2PQ64 194 aa19.24■□□□□ 0.67
SEMA3B-207ENST00000441915 A0A1W2PQD8 194 aa19.24■□□□□ 0.67
SEMA3B-207ENST00000441915 SMTNL1A8MU46 457 aa19.24■□□□□ 0.67
SEMA3B-207ENST00000441915 PRC1O43663 620 aa19.24■□□□□ 0.67
SEMA3B-207ENST00000441915 TCIRG1Q13488 830 aa19.24■□□□□ 0.67
SEMA3B-207ENST00000441915 TAF7LQ5H9L4 462 aa19.24■□□□□ 0.67
SEMA3B-207ENST00000441915 LINC00301Q8NCQ3 95 aa19.24■□□□□ 0.67
SEMA3B-207ENST00000441915 APPBP2Q92624 585 aa19.24■□□□□ 0.67
SEMA3B-207ENST00000441915 PRDM11Q9NQV5 511 aa19.24■□□□□ 0.67
SEMA3B-207ENST00000441915 PAXBP1Q9Y5B6 917 aa19.24■□□□□ 0.67
SEMA3B-207ENST00000441915 KLF18A0A0U1RQI7 1052 aa19.23■□□□□ 0.67
SEMA3B-207ENST00000441915 STK38Q15208 465 aa19.23■□□□□ 0.67
SEMA3B-207ENST00000441915 NKX1-1Q15270 411 aaPredicted RBP19.23■□□□□ 0.67
SEMA3B-207ENST00000441915 UTP14CQ5TAP6 766 aaKnown RBP19.23■□□□□ 0.67
SEMA3B-207ENST00000441915 RALYLQ86SE5 291 aaKnown RBP19.23■□□□□ 0.67
SEMA3B-207ENST00000441915 PDCL2Q8N4E4 241 aa19.23■□□□□ 0.67
SEMA3B-207ENST00000441915 NCOA7Q8NI08 942 aa19.23■□□□□ 0.67
SEMA3B-207ENST00000441915 KCNG4Q8TDN1 519 aa19.23■□□□□ 0.67
SEMA3B-207ENST00000441915 ZHX1Q9UKY1 873 aaPredicted RBP19.23■□□□□ 0.67
SEMA3B-207ENST00000441915 A0A1B0GVL5 298 aa19.23■□□□□ 0.67
SEMA3B-207ENST00000441915 CPLX1O14810 134 aa19.23■□□□□ 0.67
SEMA3B-207ENST00000441915 FOXP2O15409 715 aa19.23■□□□□ 0.67
SEMA3B-207ENST00000441915 ZRSR1Q15695 479 aaKnown RBP19.23■□□□□ 0.67
SEMA3B-207ENST00000441915 FBXO18Q8NFZ0 1043 aa19.23■□□□□ 0.67
SEMA3B-207ENST00000441915 ZNF330Q9Y3S2 320 aaPredicted RBP19.23■□□□□ 0.67
SEMA3B-207ENST00000441915 GOLGA8BA8MQT2 603 aa19.22■□□□□ 0.67
SEMA3B-207ENST00000441915 POLR3DP05423 398 aaPredicted RBP19.22■□□□□ 0.67
SEMA3B-207ENST00000441915 OTUD7BQ6GQQ9 843 aa19.22■□□□□ 0.67
SEMA3B-207ENST00000441915 POLR3EQ9NVU0 708 aa19.22■□□□□ 0.67
SEMA3B-207ENST00000441915 ORC3Q9UBD5 711 aaPredicted RBP19.22■□□□□ 0.67
SEMA3B-207ENST00000441915 A0A087WWV3 80 aa19.22■□□□□ 0.67
SEMA3B-207ENST00000441915 ZNF213O14771 459 aa19.22■□□□□ 0.67
SEMA3B-207ENST00000441915 PPP4R3BQ5MIZ7 849 aa19.22■□□□□ 0.67
SEMA3B-207ENST00000441915 BRAPQ7Z569 592 aa19.22■□□□□ 0.67
SEMA3B-207ENST00000441915 MB21D2Q8IYB1 491 aaPredicted RBP19.22■□□□□ 0.67
SEMA3B-207ENST00000441915 ANKRD7Q92527 254 aa19.22■□□□□ 0.67
SEMA3B-207ENST00000441915 ERCC4Q92889 916 aaPredicted RBP19.22■□□□□ 0.67
SEMA3B-207ENST00000441915 PUS7LQ9H0K6 701 aaKnown RBP19.22■□□□□ 0.67
SEMA3B-207ENST00000441915 YEATS4O95619 227 aa19.21■□□□□ 0.67
SEMA3B-207ENST00000441915 ZAP70P43403 619 aa19.21■□□□□ 0.67
SEMA3B-207ENST00000441915 AOPEPQ8N6M6 819 aa19.21■□□□□ 0.67
SEMA3B-207ENST00000441915 CCDC85AQ96PX6 553 aaPredicted RBP19.21■□□□□ 0.67
SEMA3B-207ENST00000441915 ABCC12Q96J65 1359 aa19.21■□□□□ 0.67
SEMA3B-207ENST00000441915 NDUFA8P51970 172 aa19.21■□□□□ 0.67
SEMA3B-207ENST00000441915 RBM6P78332 1123 aaKnown RBP19.21■□□□□ 0.67
SEMA3B-207ENST00000441915 IFIT5Q13325 482 aaKnown RBP19.21■□□□□ 0.67
SEMA3B-207ENST00000441915 SCARF1Q14162 830 aa19.21■□□□□ 0.67
SEMA3B-207ENST00000441915 FILIP1Q7Z7B0 1213 aa19.21■□□□□ 0.67
SEMA3B-207ENST00000441915 CLIC4Q9Y696 253 aa19.21■□□□□ 0.67
SEMA3B-207ENST00000441915 DMTNQ08495 405 aa19.2■□□□□ 0.66
SEMA3B-207ENST00000441915 TRIM28Q13263 835 aaKnown RBP19.2■□□□□ 0.66
SEMA3B-207ENST00000441915 SYNE3Q6ZMZ3 975 aa19.2■□□□□ 0.66
SEMA3B-207ENST00000441915 PRDM10Q9NQV6 1147 aa19.2■□□□□ 0.66
SEMA3B-207ENST00000441915 NWD2Q9ULI1 1742 aa19.2■□□□□ 0.66
SEMA3B-207ENST00000441915 SPTLC2O15270 562 aa19.2■□□□□ 0.66
SEMA3B-207ENST00000441915 SKILP12757 684 aa19.2■□□□□ 0.66
SEMA3B-207ENST00000441915 IL2RBP14784 551 aa19.2■□□□□ 0.66
SEMA3B-207ENST00000441915 MYSM1Q5VVJ2 828 aa19.2■□□□□ 0.66
SEMA3B-207ENST00000441915 FAM89AQ96GI7 184 aa19.2■□□□□ 0.66
SEMA3B-207ENST00000441915 KIAA1468Q9P260 1216 aa19.2■□□□□ 0.66
SEMA3B-207ENST00000441915 HPS5Q9UPZ3 1129 aa19.2■□□□□ 0.66
SEMA3B-207ENST00000441915 GPAA1O43292 621 aa19.19■□□□□ 0.66
SEMA3B-207ENST00000441915 PCCAP05165 728 aaPredicted RBP19.19■□□□□ 0.66
SEMA3B-207ENST00000441915 CCDC112Q8NEF3 446 aa19.19■□□□□ 0.66
SEMA3B-207ENST00000441915 FBXW7Q969H0 707 aa19.19■□□□□ 0.66
SEMA3B-207ENST00000441915 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.19■□□□□ 0.66
SEMA3B-207ENST00000441915 ARID5BQ14865 1188 aa19.19■□□□□ 0.66
SEMA3B-207ENST00000441915 HSP90AB3PQ58FF7 597 aa19.19■□□□□ 0.66
SEMA3B-207ENST00000441915 PLA2G12BQ9BX93 195 aa19.19■□□□□ 0.66
SEMA3B-207ENST00000441915 CCDC69A6NI79 296 aa19.18■□□□□ 0.66
SEMA3B-207ENST00000441915 TRDNQ13061 729 aa19.18■□□□□ 0.66
SEMA3B-207ENST00000441915 KIF6Q6ZMV9 814 aa19.18■□□□□ 0.66
SEMA3B-207ENST00000441915 TNS2Q63HR2 1409 aa19.18■□□□□ 0.66
SEMA3B-207ENST00000441915 WDR19Q8NEZ3 1342 aa19.18■□□□□ 0.66
SEMA3B-207ENST00000441915 CSF1RP07333 972 aa19.18■□□□□ 0.66
SEMA3B-207ENST00000441915 ANTXR2P58335 489 aa19.18■□□□□ 0.66
SEMA3B-207ENST00000441915 SYCP1Q15431 976 aa19.18■□□□□ 0.66
SEMA3B-207ENST00000441915 CEP135Q66GS9 1140 aa19.18■□□□□ 0.66
SEMA3B-207ENST00000441915 ZBTB38Q8NAP3 1195 aaPredicted RBP19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms