RNA–Protein interactions for RNA: ENST00000441821.5

SYN3-204, Transcript of synapsin III, humanhuman

TSL 1 (best)

Gene SYN3, Length 855 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-204ENST00000441821 USP2O75604 605 aaPredicted RBP12.87□□□□□ -0.35
SYN3-204ENST00000441821 NBPF12Q5TAG4 269 aaPredicted RBP12.87□□□□□ -0.35
SYN3-204ENST00000441821 ANKRD13AQ8IZ07 590 aa12.87□□□□□ -0.35
SYN3-204ENST00000441821 CD209Q9NNX6 404 aa12.87□□□□□ -0.35
SYN3-204ENST00000441821 MYH3P11055 1940 aa12.87□□□□□ -0.35
SYN3-204ENST00000441821 ECM29Q5VYK3 1845 aa12.86□□□□□ -0.35
SYN3-204ENST00000441821 SLC9C1Q4G0N8 1177 aa12.86□□□□□ -0.35
SYN3-204ENST00000441821 CCDC30Q5VVM6 783 aa12.86□□□□□ -0.35
SYN3-204ENST00000441821 KSR2Q6VAB6 950 aa12.86□□□□□ -0.35
SYN3-204ENST00000441821 CERS5Q8N5B7 392 aa12.86□□□□□ -0.35
SYN3-204ENST00000441821 OTUD5Q96G74 571 aa12.86□□□□□ -0.35
SYN3-204ENST00000441821 PRMT6Q96LA8 375 aaPredicted RBP12.86□□□□□ -0.35
SYN3-204ENST00000441821 IFT57Q9NWB7 429 aa12.86□□□□□ -0.35
SYN3-204ENST00000441821 KIAA0100Q14667 2235 aaKnown RBP12.86□□□□□ -0.35
SYN3-204ENST00000441821 COL6A3P12111 3177 aa12.85□□□□□ -0.35
SYN3-204ENST00000441821 CLRN2A0PK11 232 aa12.85□□□□□ -0.35
SYN3-204ENST00000441821 PI4KAP2A4QPH2 592 aa12.85□□□□□ -0.35
SYN3-204ENST00000441821 SPDYE2BA6NHP3 402 aa12.85□□□□□ -0.35
SYN3-204ENST00000441821 H7C1W4 665 aa12.85□□□□□ -0.35
SYN3-204ENST00000441821 SPDYE6P0CI01 402 aa12.85□□□□□ -0.35
SYN3-204ENST00000441821 GNAI1P63096 354 aa12.85□□□□□ -0.35
SYN3-204ENST00000441821 NEXNQ0ZGT2 675 aa12.85□□□□□ -0.35
SYN3-204ENST00000441821 WDR43Q15061 677 aaKnown RBP eCLIP12.85□□□□□ -0.35
SYN3-204ENST00000441821 SLC4A8Q2Y0W8 1093 aa12.85□□□□□ -0.35
SYN3-204ENST00000441821 CFAP100Q494V2 611 aa12.85□□□□□ -0.35
SYN3-204ENST00000441821 PI4KAP1Q8N8J0 262 aa12.85□□□□□ -0.35
SYN3-204ENST00000441821 MS4A4AQ96JQ5 239 aa12.85□□□□□ -0.35
SYN3-204ENST00000441821 MPHOSPH8Q99549 860 aa12.85□□□□□ -0.35
SYN3-204ENST00000441821 ADAMTS8Q9UP79 889 aa12.85□□□□□ -0.35
SYN3-204ENST00000441821 PCDHAC2Q9Y5I4 1007 aa12.85□□□□□ -0.35
SYN3-204ENST00000441821 PTCH2Q9Y6C5 1203 aa12.85□□□□□ -0.35
SYN3-204ENST00000441821 H0YGN5 161 aa12.84□□□□□ -0.35
SYN3-204ENST00000441821 ITGA6P23229 1130 aa12.84□□□□□ -0.35
SYN3-204ENST00000441821 KCNJ4P48050 445 aa12.84□□□□□ -0.35
SYN3-204ENST00000441821 FKBP1AP62942 108 aaKnown RBP12.84□□□□□ -0.35
SYN3-204ENST00000441821 CALD1Q05682 793 aaKnown RBP12.84□□□□□ -0.35
SYN3-204ENST00000441821 CHRNDQ07001 517 aa12.84□□□□□ -0.35
SYN3-204ENST00000441821 RASA3Q14644 834 aa12.84□□□□□ -0.35
SYN3-204ENST00000441821 C15orf52Q6ZUT6 534 aaKnown RBP12.84□□□□□ -0.35
SYN3-204ENST00000441821 C8orf58Q8NAV2 365 aa12.84□□□□□ -0.35
SYN3-204ENST00000441821 OPTNQ96CV9 577 aa12.84□□□□□ -0.35
SYN3-204ENST00000441821 PLA2G12BQ9BX93 195 aa12.84□□□□□ -0.35
SYN3-204ENST00000441821 VEZTQ9HBM0 779 aa12.84□□□□□ -0.35
SYN3-204ENST00000441821 ZFYVE28Q9HCC9 887 aa12.84□□□□□ -0.35
SYN3-204ENST00000441821 IRS2Q9Y4H2 1338 aa12.84□□□□□ -0.35
SYN3-204ENST00000441821 NEURL1BA8MQ27 555 aa12.83□□□□□ -0.36
SYN3-204ENST00000441821 F8W031 263 aaPredicted RBP12.83□□□□□ -0.36
SYN3-204ENST00000441821 CSF1RP07333 972 aa12.83□□□□□ -0.36
SYN3-204ENST00000441821 IL1R1P14778 569 aa12.83□□□□□ -0.36
SYN3-204ENST00000441821 CWF19L2Q2TBE0 894 aaKnown RBP12.83□□□□□ -0.36
SYN3-204ENST00000441821 UBE3BQ7Z3V4 1068 aa12.83□□□□□ -0.36
SYN3-204ENST00000441821 ELP3Q9H9T3 547 aa12.83□□□□□ -0.36
SYN3-204ENST00000441821 MYBBP1AQ9BQG0 1328 aaKnown RBP12.83□□□□□ -0.36
SYN3-204ENST00000441821 GTF2A2P52657 109 aa12.82□□□□□ -0.36
SYN3-204ENST00000441821 TAF1CQ15572 869 aaPredicted RBP12.82□□□□□ -0.36
SYN3-204ENST00000441821 BRI3BPQ8WY22 251 aa12.82□□□□□ -0.36
SYN3-204ENST00000441821 AOX1Q06278 1338 aa12.82□□□□□ -0.36
SYN3-204ENST00000441821 TNFAIP1Q13829 316 aa12.81□□□□□ -0.36
SYN3-204ENST00000441821 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.81□□□□□ -0.36
SYN3-204ENST00000441821 OTOFQ9HC10 1997 aa12.8□□□□□ -0.36
SYN3-204ENST00000441821 CCL15-CCL14A0A0B4J2E2 113 aa12.8□□□□□ -0.36
SYN3-204ENST00000441821 SNAP23O00161 211 aa12.8□□□□□ -0.36
SYN3-204ENST00000441821 TAF5LO75529 589 aa12.8□□□□□ -0.36
SYN3-204ENST00000441821 GNRH1P01148 92 aa12.8□□□□□ -0.36
SYN3-204ENST00000441821 RBM5P52756 815 aaKnown RBP eCLIP12.8□□□□□ -0.36
SYN3-204ENST00000441821 CASP7P55210 303 aa12.8□□□□□ -0.36
SYN3-204ENST00000441821 GCKRQ14397 625 aa12.8□□□□□ -0.36
SYN3-204ENST00000441821 CCL15Q16663 113 aa12.8□□□□□ -0.36
SYN3-204ENST00000441821 SPDYE2Q495Y8 402 aa12.8□□□□□ -0.36
SYN3-204ENST00000441821 CHRDL2Q6WN34 429 aa12.8□□□□□ -0.36
SYN3-204ENST00000441821 ZNF804AQ7Z570 1209 aa12.8□□□□□ -0.36
SYN3-204ENST00000441821 TEPSINQ96N21 525 aa12.8□□□□□ -0.36
SYN3-204ENST00000441821 ANKRD18BA2A2Z9 1011 aa12.79□□□□□ -0.36
SYN3-204ENST00000441821 TLR2O60603 784 aa12.79□□□□□ -0.36
SYN3-204ENST00000441821 WDHD1O75717 1129 aaPredicted RBP12.79□□□□□ -0.36
SYN3-204ENST00000441821 MYCP01106 439 aaPredicted RBP12.79□□□□□ -0.36
SYN3-204ENST00000441821 PRMT2P55345 433 aa12.79□□□□□ -0.36
SYN3-204ENST00000441821 MAP3K9P80192 1104 aa12.79□□□□□ -0.36
SYN3-204ENST00000441821 VGLL4Q14135 290 aa12.79□□□□□ -0.36
SYN3-204ENST00000441821 KIF22Q14807 665 aa12.79□□□□□ -0.36
SYN3-204ENST00000441821 FAM43AQ8N2R8 423 aa12.79□□□□□ -0.36
SYN3-204ENST00000441821 TSPYL6Q8N831 410 aa12.79□□□□□ -0.36
SYN3-204ENST00000441821 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.79□□□□□ -0.36
SYN3-204ENST00000441821 SH3TC2Q8TF17 1288 aa12.79□□□□□ -0.36
SYN3-204ENST00000441821 CNKSR2Q8WXI2 1034 aa12.79□□□□□ -0.36
SYN3-204ENST00000441821 STK31Q9BXU1 1019 aa12.79□□□□□ -0.36
SYN3-204ENST00000441821 ZCCHC17Q9NP64 241 aaKnown RBP12.79□□□□□ -0.36
SYN3-204ENST00000441821 RBM27Q9P2N5 1060 aaKnown RBP12.79□□□□□ -0.36
SYN3-204ENST00000441821 ZNF70Q9UC06 446 aaPredicted RBP12.79□□□□□ -0.36
SYN3-204ENST00000441821 APAF1O14727 1248 aa12.78□□□□□ -0.36
SYN3-204ENST00000441821 LACTBP83111 547 aaPredicted RBP12.78□□□□□ -0.36
SYN3-204ENST00000441821 HELBQ8NG08 1087 aaPredicted RBP12.78□□□□□ -0.36
SYN3-204ENST00000441821 ARHGAP39Q9C0H5 1083 aa12.78□□□□□ -0.36
SYN3-204ENST00000441821 SERPINA10Q9UK55 444 aa12.78□□□□□ -0.36
SYN3-204ENST00000441821 CSADQ9Y600 493 aa12.78□□□□□ -0.36
SYN3-204ENST00000441821 CDAN1Q8IWY9 1227 aa12.77□□□□□ -0.37
SYN3-204ENST00000441821 DPF3Q92784 378 aa12.77□□□□□ -0.37
SYN3-204ENST00000441821 MYH16Q9H6N6 1097 aa12.77□□□□□ -0.37
SYN3-204ENST00000441821 TDRD3Q9H7E2 651 aaKnown RBP12.77□□□□□ -0.37
SYN3-204ENST00000441821 JAG2Q9Y219 1238 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms