RNA–Protein interactions for RNA: ENST00000441799.1

HMGB3P9-201, Transcript of high mobility group box 3 pseudogene 9, humanhuman

BASIC

Gene HMGB3P9, Length 583 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P9-201ENST00000441799 FAM20CQ8IXL6 584 aa6.39□□□□□ -1.39
HMGB3P9-201ENST00000441799 KLHL23Q8NBE8 558 aa6.39□□□□□ -1.39
HMGB3P9-201ENST00000441799 UBASH3BQ8TF42 649 aa6.39□□□□□ -1.39
HMGB3P9-201ENST00000441799 SPACA7Q96KW9 195 aa6.39□□□□□ -1.39
HMGB3P9-201ENST00000441799 DNAJC2Q99543 621 aaKnown RBP6.39□□□□□ -1.39
HMGB3P9-201ENST00000441799 FAM83CQ9BQN1 747 aa6.39□□□□□ -1.39
HMGB3P9-201ENST00000441799 ADAM19Q9H013 955 aa6.39□□□□□ -1.39
HMGB3P9-201ENST00000441799 UNC13AQ9UPW8 1703 aa6.39□□□□□ -1.39
HMGB3P9-201ENST00000441799 SCNN1AP37088 669 aa6.38□□□□□ -1.39
HMGB3P9-201ENST00000441799 ZAP70P43403 619 aa6.38□□□□□ -1.39
HMGB3P9-201ENST00000441799 ANAPC15P60006 121 aa6.38□□□□□ -1.39
HMGB3P9-201ENST00000441799 TTC39BQ5VTQ0 682 aaPredicted RBP6.38□□□□□ -1.39
HMGB3P9-201ENST00000441799 GPR152Q8TDT2 470 aa6.38□□□□□ -1.39
HMGB3P9-201ENST00000441799 DBNDD2Q9BQY9 259 aa6.38□□□□□ -1.39
HMGB3P9-201ENST00000441799 ZNF777Q9ULD5 760 aaPredicted RBP6.38□□□□□ -1.39
HMGB3P9-201ENST00000441799 MTMR7Q9Y216 660 aa6.38□□□□□ -1.39
HMGB3P9-201ENST00000441799 RBM25P49756 843 aaKnown RBP6.37□□□□□ -1.39
HMGB3P9-201ENST00000441799 SRPK2P78362 688 aaKnown RBP6.37□□□□□ -1.39
HMGB3P9-201ENST00000441799 CLEC10AQ8IUN9 316 aa6.37□□□□□ -1.39
HMGB3P9-201ENST00000441799 SHKBP1Q8TBC3 707 aa6.37□□□□□ -1.39
HMGB3P9-201ENST00000441799 STK32AQ8WU08 396 aa6.37□□□□□ -1.39
HMGB3P9-201ENST00000441799 MKNK1Q9BUB5 465 aa6.37□□□□□ -1.39
HMGB3P9-201ENST00000441799 ABI2Q9NYB9 513 aaPredicted RBP6.37□□□□□ -1.39
HMGB3P9-201ENST00000441799 PREPP48147 710 aa6.36□□□□□ -1.39
HMGB3P9-201ENST00000441799 ELOAQ14241 798 aaKnown RBP6.36□□□□□ -1.39
HMGB3P9-201ENST00000441799 ZNF428Q96B54 188 aa6.36□□□□□ -1.39
HMGB3P9-201ENST00000441799 SEC31BQ9NQW1 1179 aa6.36□□□□□ -1.39
HMGB3P9-201ENST00000441799 FAM13BQ9NYF5 915 aa6.36□□□□□ -1.39
HMGB3P9-201ENST00000441799 CXXC1Q9P0U4 656 aaPredicted RBP6.36□□□□□ -1.39
HMGB3P9-201ENST00000441799 CNTN3Q9P232 1028 aa6.36□□□□□ -1.39
HMGB3P9-201ENST00000441799 FNDC3AQ9Y2H6 1198 aaKnown RBP6.36□□□□□ -1.39
HMGB3P9-201ENST00000441799 RNF114Q9Y508 228 aa6.36□□□□□ -1.39
HMGB3P9-201ENST00000441799 EIF4G1Q04637 1599 aaKnown RBP6.35□□□□□ -1.39
HMGB3P9-201ENST00000441799 NFKBIEO00221 500 aa6.35□□□□□ -1.39
HMGB3P9-201ENST00000441799 PPM1GO15355 546 aaPredicted RBP6.35□□□□□ -1.39
HMGB3P9-201ENST00000441799 BMP3P12645 472 aa6.35□□□□□ -1.39
HMGB3P9-201ENST00000441799 ACPPP15309 386 aa6.35□□□□□ -1.39
HMGB3P9-201ENST00000441799 PTPRAP18433 802 aa6.35□□□□□ -1.39
HMGB3P9-201ENST00000441799 HOXA10P31260 410 aaPredicted RBP6.35□□□□□ -1.39
HMGB3P9-201ENST00000441799 GRIK1P39086 918 aa6.35□□□□□ -1.39
HMGB3P9-201ENST00000441799 FAM117BQ6P1L5 589 aa6.35□□□□□ -1.39
HMGB3P9-201ENST00000441799 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.35□□□□□ -1.39
HMGB3P9-201ENST00000441799 BEND4Q6ZU67 534 aa6.35□□□□□ -1.39
HMGB3P9-201ENST00000441799 NCAPG2Q86XI2 1143 aa6.35□□□□□ -1.39
HMGB3P9-201ENST00000441799 YTHDC1Q96MU7 727 aaKnown RBP6.35□□□□□ -1.39
HMGB3P9-201ENST00000441799 TMEM63CQ9P1W3 806 aa6.35□□□□□ -1.39
HMGB3P9-201ENST00000441799 STIM2Q9P246 746 aa6.35□□□□□ -1.39
HMGB3P9-201ENST00000441799 USP35Q9P2H5 1018 aa6.35□□□□□ -1.39
HMGB3P9-201ENST00000441799 ADGRE2Q9UHX3 823 aa6.35□□□□□ -1.39
HMGB3P9-201ENST00000441799 WNT11O96014 354 aa6.34□□□□□ -1.39
HMGB3P9-201ENST00000441799 YBX3P16989 372 aaKnown RBP eCLIP6.34□□□□□ -1.39
HMGB3P9-201ENST00000441799 HGSNATQ68CP4 663 aa6.34□□□□□ -1.39
HMGB3P9-201ENST00000441799 GPATCH11Q8N954 259 aa6.34□□□□□ -1.39
HMGB3P9-201ENST00000441799 ELP3Q9H9T3 547 aa6.34□□□□□ -1.39
HMGB3P9-201ENST00000441799 KCNG1Q9UIX4 513 aa6.34□□□□□ -1.39
HMGB3P9-201ENST00000441799 SALL4Q9UJQ4 1053 aa6.34□□□□□ -1.39
HMGB3P9-201ENST00000441799 H3BRJ5 948 aa6.33□□□□□ -1.4
HMGB3P9-201ENST00000441799 ANKRD34AQ69YU3 496 aa6.33□□□□□ -1.4
HMGB3P9-201ENST00000441799 FAM43BQ6ZT52 329 aaPredicted RBP6.33□□□□□ -1.4
HMGB3P9-201ENST00000441799 SLAIN2Q9P270 581 aa6.33□□□□□ -1.4
HMGB3P9-201ENST00000441799 KANSL3Q9P2N6 904 aa6.33□□□□□ -1.4
HMGB3P9-201ENST00000441799 WDR64B1ANS9 1081 aa6.32□□□□□ -1.4
HMGB3P9-201ENST00000441799 SART1O43290 800 aaKnown RBP6.32□□□□□ -1.4
HMGB3P9-201ENST00000441799 TRPA1O75762 1119 aa6.32□□□□□ -1.4
HMGB3P9-201ENST00000441799 NLRP12P59046 1061 aa6.32□□□□□ -1.4
HMGB3P9-201ENST00000441799 PIP4K2BP78356 416 aa6.32□□□□□ -1.4
HMGB3P9-201ENST00000441799 HSP90AB4PQ58FF6 505 aa6.32□□□□□ -1.4
HMGB3P9-201ENST00000441799 PDE12Q6L8Q7 609 aaKnown RBP6.32□□□□□ -1.4
HMGB3P9-201ENST00000441799 ZNF526Q8TF50 670 aaPredicted RBP6.32□□□□□ -1.4
HMGB3P9-201ENST00000441799 WNT8BQ93098 351 aa6.32□□□□□ -1.4
HMGB3P9-201ENST00000441799 HHIPQ96QV1 700 aa6.32□□□□□ -1.4
HMGB3P9-201ENST00000441799 KCNF1Q9H3M0 494 aa6.32□□□□□ -1.4
HMGB3P9-201ENST00000441799 CHMP4BQ9H444 224 aaKnown RBP6.32□□□□□ -1.4
HMGB3P9-201ENST00000441799 OSGEPQ9NPF4 335 aa6.32□□□□□ -1.4
HMGB3P9-201ENST00000441799 DZANK1Q9NVP4 752 aa6.32□□□□□ -1.4
HMGB3P9-201ENST00000441799 E9PSI1 815 aa6.31□□□□□ -1.4
HMGB3P9-201ENST00000441799 TMEM164Q5U3C3 297 aa6.31□□□□□ -1.4
HMGB3P9-201ENST00000441799 ATCAYQ86WG3 371 aa6.31□□□□□ -1.4
HMGB3P9-201ENST00000441799 SHISA5Q8N114 240 aa6.31□□□□□ -1.4
HMGB3P9-201ENST00000441799 C1orf127Q8N9H9 656 aa6.31□□□□□ -1.4
HMGB3P9-201ENST00000441799 NUDT16Q96DE0 195 aaKnown RBP6.31□□□□□ -1.4
HMGB3P9-201ENST00000441799 MFSD14AQ96MC6 490 aa6.31□□□□□ -1.4
HMGB3P9-201ENST00000441799 RNF208Q9H0X6 261 aa6.31□□□□□ -1.4
HMGB3P9-201ENST00000441799 MEGF11A6BM72 1044 aa6.3□□□□□ -1.4
HMGB3P9-201ENST00000441799 CLGNO14967 610 aa6.3□□□□□ -1.4
HMGB3P9-201ENST00000441799 SGO2Q562F6 1265 aa6.3□□□□□ -1.4
HMGB3P9-201ENST00000441799 LCE1DQ5T752 114 aa6.3□□□□□ -1.4
HMGB3P9-201ENST00000441799 XKR5Q6UX68 686 aa6.3□□□□□ -1.4
HMGB3P9-201ENST00000441799 NFXL1Q6ZNB6 911 aa6.3□□□□□ -1.4
HMGB3P9-201ENST00000441799 EXOC8Q8IYI6 725 aa6.3□□□□□ -1.4
HMGB3P9-201ENST00000441799 RUSC1Q9BVN2 902 aa6.3□□□□□ -1.4
HMGB3P9-201ENST00000441799 GGNBP2Q9H3C7 697 aa6.3□□□□□ -1.4
HMGB3P9-201ENST00000441799 SEPT3Q9UH03 358 aa6.3□□□□□ -1.4
HMGB3P9-201ENST00000441799 SOX13Q9UN79 622 aa6.3□□□□□ -1.4
HMGB3P9-201ENST00000441799 HIF3AQ9Y2N7 669 aa6.3□□□□□ -1.4
HMGB3P9-201ENST00000441799 PDE2AO00408 941 aaPredicted RBP6.29□□□□□ -1.4
HMGB3P9-201ENST00000441799 F13BP05160 661 aa6.29□□□□□ -1.4
HMGB3P9-201ENST00000441799 MAP4P27816 1152 aaKnown RBP6.29□□□□□ -1.4
HMGB3P9-201ENST00000441799 FAM193AP78312 1265 aa6.29□□□□□ -1.4
HMGB3P9-201ENST00000441799 ZNF438Q7Z4V0 828 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms