RNA–Protein interactions for RNA: ENST00000441542.6

HDAC9-214, Transcript of histone deacetylase 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HDAC9, Length 3,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-214ENST00000441542 EXOC8Q8IYI6 725 aa8.66□□□□□ -1.02
HDAC9-214ENST00000441542 PPM1EQ8WY54 764 aa8.66□□□□□ -1.02
HDAC9-214ENST00000441542 EHD4Q9H223 541 aa8.66□□□□□ -1.02
HDAC9-214ENST00000441542 KIAA1468Q9P260 1216 aa8.66□□□□□ -1.02
HDAC9-214ENST00000441542 MYOM2P54296 1465 aa8.66□□□□□ -1.02
HDAC9-214ENST00000441542 PLEKHG2Q9H7P9 1386 aa8.66□□□□□ -1.02
HDAC9-214ENST00000441542 MAP2K2P36507 400 aa8.65□□□□□ -1.02
HDAC9-214ENST00000441542 ANKRD1Q15327 319 aa8.65□□□□□ -1.02
HDAC9-214ENST00000441542 ZNF827Q17R98 1081 aa8.65□□□□□ -1.02
HDAC9-214ENST00000441542 ZNF569Q5MCW4 686 aa8.65□□□□□ -1.02
HDAC9-214ENST00000441542 LRRC31Q6UY01 552 aa8.65□□□□□ -1.02
HDAC9-214ENST00000441542 GSPT2Q8IYD1 628 aaKnown RBP8.65□□□□□ -1.02
HDAC9-214ENST00000441542 CEP120Q8N960 986 aa8.65□□□□□ -1.02
HDAC9-214ENST00000441542 ANKRD20A12PQ8NF67 263 aa8.65□□□□□ -1.02
HDAC9-214ENST00000441542 SSH3Q8TE77 659 aa8.65□□□□□ -1.02
HDAC9-214ENST00000441542 ZNF396Q96N95 335 aaPredicted RBP8.65□□□□□ -1.02
HDAC9-214ENST00000441542 NEK1Q96PY6 1258 aa8.65□□□□□ -1.02
HDAC9-214ENST00000441542 BAG1Q99933 345 aaPredicted RBP8.65□□□□□ -1.02
HDAC9-214ENST00000441542 CXorf56Q9H5V9 222 aa8.65□□□□□ -1.02
HDAC9-214ENST00000441542 RAI14Q9P0K7 980 aa8.65□□□□□ -1.02
HDAC9-214ENST00000441542 SAMM50Q9Y512 469 aa8.65□□□□□ -1.02
HDAC9-214ENST00000441542 YTHDC2Q9H6S0 1430 aaKnown RBP8.65□□□□□ -1.02
HDAC9-214ENST00000441542 QRICH2Q9H0J4 1663 aa8.65□□□□□ -1.02
HDAC9-214ENST00000441542 PHLPP2Q6ZVD8 1323 aa8.65□□□□□ -1.02
HDAC9-214ENST00000441542 FRMD3A2A2Y4 597 aa8.65□□□□□ -1.02
HDAC9-214ENST00000441542 EIF3JO75822 258 aaKnown RBP8.65□□□□□ -1.02
HDAC9-214ENST00000441542 ILDR1Q86SU0 546 aaPredicted RBP8.65□□□□□ -1.02
HDAC9-214ENST00000441542 GPHNQ9NQX3 736 aaPredicted RBP8.65□□□□□ -1.02
HDAC9-214ENST00000441542 IMPACTQ9P2X3 320 aa8.65□□□□□ -1.02
HDAC9-214ENST00000441542 COBLO75128 1261 aa8.65□□□□□ -1.03
HDAC9-214ENST00000441542 TXLNAP40222 546 aa8.65□□□□□ -1.03
HDAC9-214ENST00000441542 MRPS25P82663 173 aaKnown RBP8.65□□□□□ -1.03
HDAC9-214ENST00000441542 PNOCQ13519 176 aa8.65□□□□□ -1.03
HDAC9-214ENST00000441542 NBPF20Q3BBV1 942 aa8.65□□□□□ -1.03
HDAC9-214ENST00000441542 HDXQ7Z353 690 aa8.65□□□□□ -1.03
HDAC9-214ENST00000441542 USHBP1Q8N6Y0 703 aa8.65□□□□□ -1.03
HDAC9-214ENST00000441542 YY1AP1Q9H869 796 aa8.65□□□□□ -1.03
HDAC9-214ENST00000441542 A0A0G2JLW4 131 aa8.64□□□□□ -1.03
HDAC9-214ENST00000441542 VSNL1P62760 191 aa8.64□□□□□ -1.03
HDAC9-214ENST00000441542 KLHL10Q6JEL2 608 aa8.64□□□□□ -1.03
HDAC9-214ENST00000441542 TM6SF1Q9BZW5 370 aa8.64□□□□□ -1.03
HDAC9-214ENST00000441542 SOWAHDA6NJG2 315 aa8.64□□□□□ -1.03
HDAC9-214ENST00000441542 CCP110O43303 1012 aa8.64□□□□□ -1.03
HDAC9-214ENST00000441542 CWF19L2Q2TBE0 894 aaKnown RBP8.64□□□□□ -1.03
HDAC9-214ENST00000441542 CCDC91Q7Z6B0 441 aa8.64□□□□□ -1.03
HDAC9-214ENST00000441542 SMARCC1Q92922 1105 aaPredicted RBP8.64□□□□□ -1.03
HDAC9-214ENST00000441542 EVI5LQ96CN4 794 aa8.64□□□□□ -1.03
HDAC9-214ENST00000441542 CLIC6Q96NY7 704 aa8.64□□□□□ -1.03
HDAC9-214ENST00000441542 MRPL44Q9H9J2 332 aaKnown RBP8.64□□□□□ -1.03
HDAC9-214ENST00000441542 ADCY9O60503 1353 aa8.64□□□□□ -1.03
HDAC9-214ENST00000441542 TTC41PQ6P2S7 1318 aa8.64□□□□□ -1.03
HDAC9-214ENST00000441542 ERLIN2O94905 339 aa8.63□□□□□ -1.03
HDAC9-214ENST00000441542 ZNF202O95125 648 aa8.63□□□□□ -1.03
HDAC9-214ENST00000441542 HSP90AB3PQ58FF7 597 aa8.63□□□□□ -1.03
HDAC9-214ENST00000441542 MCTP2Q6DN12 878 aa8.63□□□□□ -1.03
HDAC9-214ENST00000441542 SYNE3Q6ZMZ3 975 aa8.63□□□□□ -1.03
HDAC9-214ENST00000441542 DDX46Q7L014 1031 aaKnown RBP8.63□□□□□ -1.03
HDAC9-214ENST00000441542 RABGGTAQ92696 567 aa8.63□□□□□ -1.03
HDAC9-214ENST00000441542 MAP4K1Q92918 833 aa8.63□□□□□ -1.03
HDAC9-214ENST00000441542 JPH2Q9BR39 696 aaPredicted RBP8.63□□□□□ -1.03
HDAC9-214ENST00000441542 ZSCAN16Q9H4T2 348 aaPredicted RBP8.63□□□□□ -1.03
HDAC9-214ENST00000441542 MRFAP1Q9Y605 127 aa8.63□□□□□ -1.03
HDAC9-214ENST00000441542 ERLIN1O75477 346 aa8.63□□□□□ -1.03
HDAC9-214ENST00000441542 TDO2P48775 406 aa8.63□□□□□ -1.03
HDAC9-214ENST00000441542 G3BP1Q13283 466 aaKnown RBP eCLIP8.63□□□□□ -1.03
HDAC9-214ENST00000441542 CASP8Q14790 479 aa8.63□□□□□ -1.03
HDAC9-214ENST00000441542 EAF2Q96CJ1 260 aaPredicted RBP8.63□□□□□ -1.03
HDAC9-214ENST00000441542 CAPZA3Q96KX2 299 aa8.63□□□□□ -1.03
HDAC9-214ENST00000441542 CDC5LQ99459 802 aaKnown RBP8.63□□□□□ -1.03
HDAC9-214ENST00000441542 RCOR1Q9UKL0 485 aa8.63□□□□□ -1.03
HDAC9-214ENST00000441542 SUFUQ9UMX1 484 aa8.63□□□□□ -1.03
HDAC9-214ENST00000441542 DEPDC5O75140 1603 aa8.63□□□□□ -1.03
HDAC9-214ENST00000441542 RNF40O75150 1001 aa8.63□□□□□ -1.03
HDAC9-214ENST00000441542 AMPHP49418 695 aa8.63□□□□□ -1.03
HDAC9-214ENST00000441542 HAND2P61296 217 aa8.63□□□□□ -1.03
HDAC9-214ENST00000441542 MAP3K9P80192 1104 aa8.63□□□□□ -1.03
HDAC9-214ENST00000441542 PPP2R5AQ15172 486 aa8.63□□□□□ -1.03
HDAC9-214ENST00000441542 TADA2BQ86TJ2 420 aa8.63□□□□□ -1.03
HDAC9-214ENST00000441542 ENGASEQ8NFI3 743 aa8.63□□□□□ -1.03
HDAC9-214ENST00000441542 FAM107BQ9H098 131 aa8.63□□□□□ -1.03
HDAC9-214ENST00000441542 SLC24A3Q9HC58 644 aa8.63□□□□□ -1.03
HDAC9-214ENST00000441542 CHPF2Q9P2E5 772 aa8.63□□□□□ -1.03
HDAC9-214ENST00000441542 TTC36A6NLP5 189 aa8.62□□□□□ -1.03
HDAC9-214ENST00000441542 A1BGP04217 495 aa8.62□□□□□ -1.03
HDAC9-214ENST00000441542 SSBP05455 408 aaKnown RBP eCLIP8.62□□□□□ -1.03
HDAC9-214ENST00000441542 CCDC172P0C7W6 258 aa8.62□□□□□ -1.03
HDAC9-214ENST00000441542 ADD1P35611 737 aaKnown RBP8.62□□□□□ -1.03
HDAC9-214ENST00000441542 STX17P56962 302 aa8.62□□□□□ -1.03
HDAC9-214ENST00000441542 CORO7P57737 925 aa8.62□□□□□ -1.03
HDAC9-214ENST00000441542 NCAPH2Q6IBW4 605 aa8.62□□□□□ -1.03
HDAC9-214ENST00000441542 OLFM4Q6UX06 510 aa8.62□□□□□ -1.03
HDAC9-214ENST00000441542 MMS22LQ6ZRQ5 1243 aa8.62□□□□□ -1.03
HDAC9-214ENST00000441542 GPIHBP1Q8IV16 184 aa8.62□□□□□ -1.03
HDAC9-214ENST00000441542 FMR1NBQ8N0W7 255 aaPredicted RBP8.62□□□□□ -1.03
HDAC9-214ENST00000441542 KAT2BQ92831 832 aa8.62□□□□□ -1.03
HDAC9-214ENST00000441542 MPHOSPH8Q99549 860 aa8.62□□□□□ -1.03
HDAC9-214ENST00000441542 BRMS1Q9HCU9 246 aa8.62□□□□□ -1.03
HDAC9-214ENST00000441542 MAP3K19Q56UN5 1328 aa8.62□□□□□ -1.03
HDAC9-214ENST00000441542 INO80Q9ULG1 1556 aaPredicted RBP8.62□□□□□ -1.03
HDAC9-214ENST00000441542 CCDC151A5D8V7 595 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms