RNA–Protein interactions for RNA: ENST00000440925.1

PLOD3-205, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 4

Gene PLOD3, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-205ENST00000440925 TBC1D9Q6ZT07 1266 aa18.22■□□□□ 0.51
PLOD3-205ENST00000440925 ZNF804AQ7Z570 1209 aa18.22■□□□□ 0.51
PLOD3-205ENST00000440925 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.22■□□□□ 0.51
PLOD3-205ENST00000440925 ZNRF3Q9ULT6 936 aa18.22■□□□□ 0.51
PLOD3-205ENST00000440925 SCN9AQ15858 1988 aa18.22■□□□□ 0.51
PLOD3-205ENST00000440925 FAM205AQ6ZU69 1335 aa18.22■□□□□ 0.51
PLOD3-205ENST00000440925 MAP4K4O95819 1239 aaPredicted RBP18.21■□□□□ 0.51
PLOD3-205ENST00000440925 UQCRFS1P1P0C7P4 283 aa18.21■□□□□ 0.51
PLOD3-205ENST00000440925 GSPT1P15170 499 aaKnown RBP18.21■□□□□ 0.51
PLOD3-205ENST00000440925 TTC39AQ5SRH9 613 aa18.21■□□□□ 0.51
PLOD3-205ENST00000440925 SPATA5Q8NB90 893 aa18.21■□□□□ 0.51
PLOD3-205ENST00000440925 ZNF384Q8TF68 577 aa18.21■□□□□ 0.51
PLOD3-205ENST00000440925 HAUS7Q99871 368 aa18.21■□□□□ 0.51
PLOD3-205ENST00000440925 PIH1D3Q9NQM4 214 aaKnown RBP18.21■□□□□ 0.51
PLOD3-205ENST00000440925 CCDC88AQ3V6T2 1871 aa18.2■□□□□ 0.5
PLOD3-205ENST00000440925 CHGBP05060 677 aa18.2■□□□□ 0.5
PLOD3-205ENST00000440925 RGS3P49796 1198 aa18.2■□□□□ 0.5
PLOD3-205ENST00000440925 GTF2IP78347 998 aa18.2■□□□□ 0.5
PLOD3-205ENST00000440925 DACT2Q5SW24 774 aa18.2■□□□□ 0.5
PLOD3-205ENST00000440925 GMLQ99445 158 aa18.2■□□□□ 0.5
PLOD3-205ENST00000440925 ZNF646O15015 1829 aaPredicted RBP18.19■□□□□ 0.5
PLOD3-205ENST00000440925 RAD17O75943 681 aa18.19■□□□□ 0.5
PLOD3-205ENST00000440925 VIL1P09327 827 aaKnown RBP18.19■□□□□ 0.5
PLOD3-205ENST00000440925 TTLL5Q6EMB2 1281 aa18.19■□□□□ 0.5
PLOD3-205ENST00000440925 VPS37DQ86XT2 251 aa18.19■□□□□ 0.5
PLOD3-205ENST00000440925 RNF181Q9P0P0 153 aa18.19■□□□□ 0.5
PLOD3-205ENST00000440925 ZNF541Q9H0D2 1346 aa18.19■□□□□ 0.5
PLOD3-205ENST00000440925 PSMD14O00487 310 aa18.18■□□□□ 0.5
PLOD3-205ENST00000440925 SEMA3EO15041 775 aa18.18■□□□□ 0.5
PLOD3-205ENST00000440925 CHAF1AQ13111 956 aaPredicted RBP18.18■□□□□ 0.5
PLOD3-205ENST00000440925 TTC22Q5TAA0 569 aa18.18■□□□□ 0.5
PLOD3-205ENST00000440925 NIM1KQ8IY84 436 aa18.18■□□□□ 0.5
PLOD3-205ENST00000440925 ZBTB47Q9UFB7 747 aaPredicted RBP18.18■□□□□ 0.5
PLOD3-205ENST00000440925 DENND2AQ9ULE3 1009 aa18.18■□□□□ 0.5
PLOD3-205ENST00000440925 AOX1Q06278 1338 aa18.18■□□□□ 0.5
PLOD3-205ENST00000440925 USP17L3A6NCW0 530 aa18.17■□□□□ 0.5
PLOD3-205ENST00000440925 USP17L4A6NCW7 530 aa18.17■□□□□ 0.5
PLOD3-205ENST00000440925 GLRX3O76003 335 aaKnown RBP18.17■□□□□ 0.5
PLOD3-205ENST00000440925 SLFNL1Q499Z3 407 aa18.17■□□□□ 0.5
PLOD3-205ENST00000440925 STRIP1Q5VSL9 837 aa18.17■□□□□ 0.5
PLOD3-205ENST00000440925 USP17L1Q7RTZ2 530 aa18.17■□□□□ 0.5
PLOD3-205ENST00000440925 GNL3LQ9NVN8 582 aaKnown RBP18.17■□□□□ 0.5
PLOD3-205ENST00000440925 PDS5AQ29RF7 1337 aaKnown RBP18.17■□□□□ 0.5
PLOD3-205ENST00000440925 JDP2Q8WYK2 163 aa18.16■□□□□ 0.5
PLOD3-205ENST00000440925 ZBTB12Q9Y330 459 aaPredicted RBP18.16■□□□□ 0.5
PLOD3-205ENST00000440925 SHTN1A0MZ66 631 aa18.15■□□□□ 0.5
PLOD3-205ENST00000440925 GOLIM4O00461 696 aa18.15■□□□□ 0.5
PLOD3-205ENST00000440925 DNAJC2Q99543 621 aaKnown RBP18.15■□□□□ 0.5
PLOD3-205ENST00000440925 SALL1Q9NSC2 1324 aa18.15■□□□□ 0.5
PLOD3-205ENST00000440925 DICER1Q9UPY3 1922 aaKnown RBP18.15■□□□□ 0.5
PLOD3-205ENST00000440925 G3V3G9 751 aa18.14■□□□□ 0.49
PLOD3-205ENST00000440925 SDSP20132 328 aa18.14■□□□□ 0.49
PLOD3-205ENST00000440925 PRDX5P30044 214 aa18.14■□□□□ 0.49
PLOD3-205ENST00000440925 DCAF8Q5TAQ9 597 aa18.14■□□□□ 0.49
PLOD3-205ENST00000440925 PAG1Q9NWQ8 432 aa18.14■□□□□ 0.49
PLOD3-205ENST00000440925 ERC2O15083 957 aa18.13■□□□□ 0.49
PLOD3-205ENST00000440925 FKBP1AP62942 108 aaKnown RBP18.13■□□□□ 0.49
PLOD3-205ENST00000440925 CIAPIN1Q6FI81 312 aa18.13■□□□□ 0.49
PLOD3-205ENST00000440925 RSBN1LQ6PCB5 846 aaPredicted RBP18.13■□□□□ 0.49
PLOD3-205ENST00000440925 WDR66Q8TBY9 1149 aa18.13■□□□□ 0.49
PLOD3-205ENST00000440925 POTECB2RU33 542 aa18.12■□□□□ 0.49
PLOD3-205ENST00000440925 FRAT2O75474 233 aaPredicted RBP18.12■□□□□ 0.49
PLOD3-205ENST00000440925 DDNO94850 711 aaPredicted RBP18.12■□□□□ 0.49
PLOD3-205ENST00000440925 MFSD14BQ5SR56 506 aa18.12■□□□□ 0.49
PLOD3-205ENST00000440925 GPATCH3Q96I76 525 aa18.12■□□□□ 0.49
PLOD3-205ENST00000440925 PCDHAC2Q9Y5I4 1007 aa18.12■□□□□ 0.49
PLOD3-205ENST00000440925 MYO5AQ9Y4I1 1855 aaKnown RBP18.12■□□□□ 0.49
PLOD3-205ENST00000440925 TCRBV5S4A2TA0A5A2 114 aa18.11■□□□□ 0.49
PLOD3-205ENST00000440925 ADGRA1Q86SQ6 560 aa18.11■□□□□ 0.49
PLOD3-205ENST00000440925 FBXW7Q969H0 707 aa18.11■□□□□ 0.49
PLOD3-205ENST00000440925 NSUN4Q96CB9 384 aaKnown RBP18.11■□□□□ 0.49
PLOD3-205ENST00000440925 GMPSP49915 693 aaPredicted RBP18.1■□□□□ 0.49
PLOD3-205ENST00000440925 EIF6P56537 245 aaKnown RBP18.1■□□□□ 0.49
PLOD3-205ENST00000440925 MECOMQ03112 1051 aa18.1■□□□□ 0.49
PLOD3-205ENST00000440925 KBTBD3Q8NAB2 608 aa18.1■□□□□ 0.49
PLOD3-205ENST00000440925 ABCF2Q9UG63 623 aa18.1■□□□□ 0.49
PLOD3-205ENST00000440925 PSME4Q14997 1843 aa18.09■□□□□ 0.49
PLOD3-205ENST00000440925 TNIP1Q15025 636 aa18.09■□□□□ 0.49
PLOD3-205ENST00000440925 BMP2KLQ5H9B9 411 aa18.09■□□□□ 0.49
PLOD3-205ENST00000440925 TBC1D22AQ8WUA7 517 aa18.09■□□□□ 0.49
PLOD3-205ENST00000440925 EVI5LQ96CN4 794 aa18.09■□□□□ 0.49
PLOD3-205ENST00000440925 GJA3Q9Y6H8 435 aa18.09■□□□□ 0.49
PLOD3-205ENST00000440925 F8W031 263 aaPredicted RBP18.08■□□□□ 0.48
PLOD3-205ENST00000440925 EGFRP00533 1210 aa18.08■□□□□ 0.48
PLOD3-205ENST00000440925 SCNN1DP51172 638 aa18.08■□□□□ 0.48
PLOD3-205ENST00000440925 DIXDC1Q155Q3 683 aa18.08■□□□□ 0.48
PLOD3-205ENST00000440925 KIAA0825Q8IV33 1275 aa18.08■□□□□ 0.48
PLOD3-205ENST00000440925 GPC2Q8N158 579 aa18.08■□□□□ 0.48
PLOD3-205ENST00000440925 AGBL3Q8NEM8 1001 aa18.08■□□□□ 0.48
PLOD3-205ENST00000440925 RILPL2Q969X0 211 aa18.08■□□□□ 0.48
PLOD3-205ENST00000440925 MRIQ9BWK5 157 aa18.08■□□□□ 0.48
PLOD3-205ENST00000440925 GLTPD2A6NH11 291 aa18.07■□□□□ 0.48
PLOD3-205ENST00000440925 TRIM6-TRIM34B2RNG4 842 aa18.07■□□□□ 0.48
PLOD3-205ENST00000440925 PDE6AP16499 860 aa18.07■□□□□ 0.48
PLOD3-205ENST00000440925 ERICH6Q7L0X2 663 aa18.07■□□□□ 0.48
PLOD3-205ENST00000440925 DPF2Q92785 391 aa18.07■□□□□ 0.48
PLOD3-205ENST00000440925 ZBED3Q96IU2 234 aaPredicted RBP18.07■□□□□ 0.48
PLOD3-205ENST00000440925 IL25Q9H293 177 aa18.07■□□□□ 0.48
PLOD3-205ENST00000440925 LRP2BPQ9P2M1 347 aa18.07■□□□□ 0.48
PLOD3-205ENST00000440925 RNF113AO15541 343 aaKnown RBP18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms