RNA–Protein interactions for RNA: ENST00000440653.1

HDAC6-209, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-209ENST00000440653 CACNA1SQ13698 1873 aa10.94□□□□□ -0.66
HDAC6-209ENST00000440653 ERVV-1B6SEH8 477 aa10.94□□□□□ -0.66
HDAC6-209ENST00000440653 EYA2O00167 538 aa10.94□□□□□ -0.66
HDAC6-209ENST00000440653 ZPR1O75312 459 aa10.94□□□□□ -0.66
HDAC6-209ENST00000440653 MAP4K4O95819 1239 aaPredicted RBP10.94□□□□□ -0.66
HDAC6-209ENST00000440653 HSP90B1P14625 803 aaKnown RBP10.94□□□□□ -0.66
HDAC6-209ENST00000440653 PSMA5P28066 241 aa10.94□□□□□ -0.66
HDAC6-209ENST00000440653 KRT32Q14532 448 aa10.94□□□□□ -0.66
HDAC6-209ENST00000440653 BICDL1Q6ZP65 573 aa10.94□□□□□ -0.66
HDAC6-209ENST00000440653 CTU1Q7Z7A3 348 aaKnown RBP10.94□□□□□ -0.66
HDAC6-209ENST00000440653 DNAJC10Q8IXB1 793 aa10.94□□□□□ -0.66
HDAC6-209ENST00000440653 ZBTB38Q8NAP3 1195 aaPredicted RBP10.94□□□□□ -0.66
HDAC6-209ENST00000440653 HAUS7Q99871 368 aa10.94□□□□□ -0.66
HDAC6-209ENST00000440653 BCL2L12Q9HB09 334 aa10.94□□□□□ -0.66
HDAC6-209ENST00000440653 SH2B1Q9NRF2 756 aaPredicted RBP10.94□□□□□ -0.66
HDAC6-209ENST00000440653 TLR7Q9NYK1 1049 aaKnown RBP10.94□□□□□ -0.66
HDAC6-209ENST00000440653 AKAP2Q9Y2D5 859 aa10.94□□□□□ -0.66
HDAC6-209ENST00000440653 CHMP3Q9Y3E7 222 aa10.94□□□□□ -0.66
HDAC6-209ENST00000440653 SNX14Q9Y5W7 946 aa10.94□□□□□ -0.66
HDAC6-209ENST00000440653 COL11A2P13942 1736 aaPredicted RBP10.94□□□□□ -0.66
HDAC6-209ENST00000440653 PITPNM2Q9BZ72 1349 aa10.93□□□□□ -0.66
HDAC6-209ENST00000440653 RGL2O15211 777 aa10.93□□□□□ -0.66
HDAC6-209ENST00000440653 TRAK2O60296 914 aa10.93□□□□□ -0.66
HDAC6-209ENST00000440653 CELF2O95319 508 aaKnown RBP10.93□□□□□ -0.66
HDAC6-209ENST00000440653 TFCP2Q12800 502 aa10.93□□□□□ -0.66
HDAC6-209ENST00000440653 VPS53Q5VIR6 699 aa10.93□□□□□ -0.66
HDAC6-209ENST00000440653 CCDC8Q9H0W5 538 aaPredicted RBP10.93□□□□□ -0.66
HDAC6-209ENST00000440653 IL25Q9H293 177 aa10.93□□□□□ -0.66
HDAC6-209ENST00000440653 ZNF277Q9NRM2 450 aaPredicted RBP10.93□□□□□ -0.66
HDAC6-209ENST00000440653 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.93□□□□□ -0.66
HDAC6-209ENST00000440653 TRPA1O75762 1119 aa10.92□□□□□ -0.66
HDAC6-209ENST00000440653 CYP19A1P11511 503 aaPredicted RBP10.92□□□□□ -0.66
HDAC6-209ENST00000440653 EPS15P42566 896 aa10.92□□□□□ -0.66
HDAC6-209ENST00000440653 NMIQ13287 307 aaPredicted RBP10.92□□□□□ -0.66
HDAC6-209ENST00000440653 ANKRD1Q15327 319 aa10.92□□□□□ -0.66
HDAC6-209ENST00000440653 CCDC57Q2TAC2 916 aa10.92□□□□□ -0.66
HDAC6-209ENST00000440653 KLHDC4Q8TBB5 520 aa10.92□□□□□ -0.66
HDAC6-209ENST00000440653 ZSCAN31Q96LW9 406 aaPredicted RBP10.92□□□□□ -0.66
HDAC6-209ENST00000440653 TTC14Q96N46 770 aa10.92□□□□□ -0.66
HDAC6-209ENST00000440653 CYP46A1Q9Y6A2 500 aa10.92□□□□□ -0.66
HDAC6-209ENST00000440653 RTL9Q8NET4 1388 aa10.91□□□□□ -0.66
HDAC6-209ENST00000440653 BAG4O95429 457 aaKnown RBP10.91□□□□□ -0.66
HDAC6-209ENST00000440653 KCNJ4P48050 445 aa10.91□□□□□ -0.66
HDAC6-209ENST00000440653 KLHL40Q2TBA0 621 aa10.91□□□□□ -0.66
HDAC6-209ENST00000440653 ATG9AQ7Z3C6 839 aa10.91□□□□□ -0.66
HDAC6-209ENST00000440653 SYNE4Q8N205 404 aa10.91□□□□□ -0.66
HDAC6-209ENST00000440653 KBTBD3Q8NAB2 608 aa10.91□□□□□ -0.66
HDAC6-209ENST00000440653 MAP4K1Q92918 833 aa10.91□□□□□ -0.66
HDAC6-209ENST00000440653 HHIPL1Q96JK4 782 aa10.91□□□□□ -0.66
HDAC6-209ENST00000440653 ALDH8A1Q9H2A2 487 aaPredicted RBP10.91□□□□□ -0.66
HDAC6-209ENST00000440653 BOLA2Q9H3K6 86 aa10.91□□□□□ -0.66
HDAC6-209ENST00000440653 RNF186Q9NXI6 227 aa10.91□□□□□ -0.66
HDAC6-209ENST00000440653 LIMCH1Q9UPQ0 1083 aa10.91□□□□□ -0.66
HDAC6-209ENST00000440653 RBM8AQ9Y5S9 174 aaKnown RBP10.91□□□□□ -0.66
HDAC6-209ENST00000440653 U3KPZ7 1027 aaPredicted RBP10.91□□□□□ -0.66
HDAC6-209ENST00000440653 A0A0D9SFI3 127 aa10.9□□□□□ -0.66
HDAC6-209ENST00000440653 FZD9O00144 591 aa10.9□□□□□ -0.66
HDAC6-209ENST00000440653 BRD1O95696 1058 aa10.9□□□□□ -0.66
HDAC6-209ENST00000440653 CASTP20810 708 aaKnown RBP10.9□□□□□ -0.66
HDAC6-209ENST00000440653 CTSWP56202 376 aa10.9□□□□□ -0.66
HDAC6-209ENST00000440653 NOGQ13253 232 aa10.9□□□□□ -0.66
HDAC6-209ENST00000440653 IFIT5Q13325 482 aaKnown RBP10.9□□□□□ -0.66
HDAC6-209ENST00000440653 NECTIN1Q15223 517 aa10.9□□□□□ -0.66
HDAC6-209ENST00000440653 TSGA10IPQ3SY00 556 aa10.9□□□□□ -0.66
HDAC6-209ENST00000440653 TAF7LQ5H9L4 462 aa10.9□□□□□ -0.66
HDAC6-209ENST00000440653 PRPF40BQ6NWY9 871 aaKnown RBP10.9□□□□□ -0.66
HDAC6-209ENST00000440653 OLFM4Q6UX06 510 aa10.9□□□□□ -0.66
HDAC6-209ENST00000440653 DBNDD2Q9BQY9 259 aa10.9□□□□□ -0.66
HDAC6-209ENST00000440653 UPF3BQ9BZI7 483 aaKnown RBP10.9□□□□□ -0.66
HDAC6-209ENST00000440653 ZSWIM6Q9HCJ5 1215 aa10.9□□□□□ -0.66
HDAC6-209ENST00000440653 HELLSQ9NRZ9 838 aa10.9□□□□□ -0.66
HDAC6-209ENST00000440653 FOXD4L1Q9NU39 408 aa10.9□□□□□ -0.66
HDAC6-209ENST00000440653 CEP126Q9P2H0 1117 aa10.9□□□□□ -0.66
HDAC6-209ENST00000440653 NARFQ9UHQ1 456 aa10.9□□□□□ -0.66
HDAC6-209ENST00000440653 TRIOBPQ9H2D6 2365 aa10.9□□□□□ -0.66
HDAC6-209ENST00000440653 AKAP11Q9UKA4 1901 aa10.9□□□□□ -0.67
HDAC6-209ENST00000440653 GOLGA6L3A6NEY3 463 aa10.89□□□□□ -0.67
HDAC6-209ENST00000440653 MBD3O95983 291 aa10.89□□□□□ -0.67
HDAC6-209ENST00000440653 CSF1RP07333 972 aa10.89□□□□□ -0.67
HDAC6-209ENST00000440653 ZFYP08048 801 aaPredicted RBP10.89□□□□□ -0.67
HDAC6-209ENST00000440653 PARP10Q53GL7 1025 aa10.89□□□□□ -0.67
HDAC6-209ENST00000440653 CREB3L3Q68CJ9 461 aa10.89□□□□□ -0.67
HDAC6-209ENST00000440653 NLRP10Q86W26 655 aa10.89□□□□□ -0.67
HDAC6-209ENST00000440653 GPC2Q8N158 579 aa10.89□□□□□ -0.67
HDAC6-209ENST00000440653 ZGPATQ8N5A5 531 aaKnown RBP10.89□□□□□ -0.67
HDAC6-209ENST00000440653 C7orf43Q8WVR3 580 aa10.89□□□□□ -0.67
HDAC6-209ENST00000440653 JAKMIP1Q96N16 626 aaKnown RBP10.89□□□□□ -0.67
HDAC6-209ENST00000440653 ZNF408Q9H9D4 720 aa10.89□□□□□ -0.67
HDAC6-209ENST00000440653 PAG1Q9NWQ8 432 aa10.89□□□□□ -0.67
HDAC6-209ENST00000440653 ZBTB1Q9Y2K1 713 aa10.89□□□□□ -0.67
HDAC6-209ENST00000440653 ATP6V1DQ9Y5K8 247 aa10.89□□□□□ -0.67
HDAC6-209ENST00000440653 GJA3Q9Y6H8 435 aa10.89□□□□□ -0.67
HDAC6-209ENST00000440653 MAST2Q6P0Q8 1798 aa10.89□□□□□ -0.67
HDAC6-209ENST00000440653 MYH15Q9Y2K3 1946 aa10.89□□□□□ -0.67
HDAC6-209ENST00000440653 A0A1B0GUL7 405 aa10.88□□□□□ -0.67
HDAC6-209ENST00000440653 FSD2A1L4K1 749 aa10.88□□□□□ -0.67
HDAC6-209ENST00000440653 PDE6BP35913 854 aa10.88□□□□□ -0.67
HDAC6-209ENST00000440653 SCNN1DP51172 638 aa10.88□□□□□ -0.67
HDAC6-209ENST00000440653 AK2P54819 239 aa10.88□□□□□ -0.67
HDAC6-209ENST00000440653 MCMDC2Q4G0Z9 681 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms