RNA–Protein interactions for RNA: ENST00000440552.5

PTPRN-205, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 4

Gene PTPRN, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-205ENST00000440552 ANKRD18BA2A2Z9 1011 aa18.1■□□□□ 0.49
PTPRN-205ENST00000440552 PPP1R12BO60237 982 aaPredicted RBP18.1■□□□□ 0.49
PTPRN-205ENST00000440552 CERS5Q8N5B7 392 aa18.1■□□□□ 0.49
PTPRN-205ENST00000440552 SLC10A4Q96EP9 437 aa18.1■□□□□ 0.49
PTPRN-205ENST00000440552 LAMB1P07942 1786 aa18.09■□□□□ 0.49
PTPRN-205ENST00000440552 KIAA0100Q14667 2235 aaKnown RBP18.09■□□□□ 0.49
PTPRN-205ENST00000440552 IL1R1P14778 569 aa18.09■□□□□ 0.49
PTPRN-205ENST00000440552 IFNL1Q8IU54 200 aa18.09■□□□□ 0.49
PTPRN-205ENST00000440552 ECM29Q5VYK3 1845 aa18.09■□□□□ 0.49
PTPRN-205ENST00000440552 SSC5DA1L4H1 1573 aa18.08■□□□□ 0.49
PTPRN-205ENST00000440552 FKBP5Q13451 457 aaPredicted RBP18.08■□□□□ 0.48
PTPRN-205ENST00000440552 SUPT20HL1Q3ZLR7 823 aa18.08■□□□□ 0.48
PTPRN-205ENST00000440552 WNK4Q96J92 1243 aa18.08■□□□□ 0.48
PTPRN-205ENST00000440552 SPDYE2BA6NHP3 402 aa18.07■□□□□ 0.48
PTPRN-205ENST00000440552 MYO1BO43795 1136 aa18.07■□□□□ 0.48
PTPRN-205ENST00000440552 SPDYE6P0CI01 402 aa18.07■□□□□ 0.48
PTPRN-205ENST00000440552 IFIT5Q13325 482 aaKnown RBP18.07■□□□□ 0.48
PTPRN-205ENST00000440552 ZNF804AQ7Z570 1209 aa18.07■□□□□ 0.48
PTPRN-205ENST00000440552 TAF5LO75529 589 aa18.06■□□□□ 0.48
PTPRN-205ENST00000440552 FOXO4P98177 505 aa18.06■□□□□ 0.48
PTPRN-205ENST00000440552 CFAP100Q494V2 611 aa18.06■□□□□ 0.48
PTPRN-205ENST00000440552 INTS3Q68E01 1043 aaKnown RBP18.06■□□□□ 0.48
PTPRN-205ENST00000440552 CLMNQ96JQ2 1002 aa18.06■□□□□ 0.48
PTPRN-205ENST00000440552 FZD1Q9UP38 647 aa18.06■□□□□ 0.48
PTPRN-205ENST00000440552 A0A1B0GUL6 1792 aa18.06■□□□□ 0.48
PTPRN-205ENST00000440552 SNAP23O00161 211 aa18.05■□□□□ 0.48
PTPRN-205ENST00000440552 IGF2BP3O00425 579 aaKnown RBP eCLIP18.05■□□□□ 0.48
PTPRN-205ENST00000440552 OTOP1Q7RTM1 612 aa18.05■□□□□ 0.48
PTPRN-205ENST00000440552 PRMT6Q96LA8 375 aaPredicted RBP18.05■□□□□ 0.48
PTPRN-205ENST00000440552 TRIM17Q9Y577 477 aa18.05■□□□□ 0.48
PTPRN-205ENST00000440552 IREB2P48200 963 aaKnown RBP18.04■□□□□ 0.48
PTPRN-205ENST00000440552 OTUD7BQ6GQQ9 843 aa18.04■□□□□ 0.48
PTPRN-205ENST00000440552 HELBQ8NG08 1087 aaPredicted RBP18.04■□□□□ 0.48
PTPRN-205ENST00000440552 ERO1AQ96HE7 468 aa18.04■□□□□ 0.48
PTPRN-205ENST00000440552 PCDHAC2Q9Y5I4 1007 aa18.04■□□□□ 0.48
PTPRN-205ENST00000440552 FAM205AQ6ZU69 1335 aa18.03■□□□□ 0.48
PTPRN-205ENST00000440552 FANCIQ9NVI1 1328 aa18.03■□□□□ 0.48
PTPRN-205ENST00000440552 CLRN2A0PK11 232 aa18.03■□□□□ 0.48
PTPRN-205ENST00000440552 TESPA1A2RU30 521 aaPredicted RBP18.03■□□□□ 0.48
PTPRN-205ENST00000440552 VAMP4O75379 141 aa18.03■□□□□ 0.48
PTPRN-205ENST00000440552 USP2O75604 605 aaPredicted RBP18.03■□□□□ 0.48
PTPRN-205ENST00000440552 NBPF12Q5TAG4 269 aaPredicted RBP18.03■□□□□ 0.48
PTPRN-205ENST00000440552 GCC1Q96CN9 775 aa18.03■□□□□ 0.48
PTPRN-205ENST00000440552 F8W031 263 aaPredicted RBP18.02■□□□□ 0.48
PTPRN-205ENST00000440552 RASA3Q14644 834 aa18.02■□□□□ 0.48
PTPRN-205ENST00000440552 BEND3Q5T5X7 828 aa18.02■□□□□ 0.48
PTPRN-205ENST00000440552 ANKRD13AQ8IZ07 590 aa18.02■□□□□ 0.48
PTPRN-205ENST00000440552 VEZTQ9HBM0 779 aa18.02■□□□□ 0.48
PTPRN-205ENST00000440552 HTTP42858 3142 aa18.02■□□□□ 0.47
PTPRN-205ENST00000440552 AOX1Q06278 1338 aa18.01■□□□□ 0.47
PTPRN-205ENST00000440552 GJA5P36382 358 aa18.01■□□□□ 0.47
PTPRN-205ENST00000440552 TNFAIP1Q13829 316 aa18.01■□□□□ 0.47
PTPRN-205ENST00000440552 CCDC184Q52MB2 194 aa18.01■□□□□ 0.47
PTPRN-205ENST00000440552 LMBR1LQ6UX01 489 aa18.01■□□□□ 0.47
PTPRN-205ENST00000440552 CHMP3Q9Y3E7 222 aa18.01■□□□□ 0.47
PTPRN-205ENST00000440552 RBBP6Q7Z6E9 1792 aaKnown RBP18■□□□□ 0.47
PTPRN-205ENST00000440552 CRHR2Q13324 411 aa18■□□□□ 0.47
PTPRN-205ENST00000440552 CCDC57Q2TAC2 916 aa18■□□□□ 0.47
PTPRN-205ENST00000440552 SPDYE2Q495Y8 402 aa18■□□□□ 0.47
PTPRN-205ENST00000440552 LDHAL6AQ6ZMR3 332 aa18■□□□□ 0.47
PTPRN-205ENST00000440552 WDR63Q8IWG1 891 aa18■□□□□ 0.47
PTPRN-205ENST00000440552 ARMC5Q96C12 935 aa18■□□□□ 0.47
PTPRN-205ENST00000440552 SERPINA10Q9UK55 444 aa18■□□□□ 0.47
PTPRN-205ENST00000440552 PTPN22Q9Y2R2 807 aa18■□□□□ 0.47
PTPRN-205ENST00000440552 GRM8O00222 908 aa17.99■□□□□ 0.47
PTPRN-205ENST00000440552 UBE4AQ14139 1066 aa17.99■□□□□ 0.47
PTPRN-205ENST00000440552 EPHA10Q5JZY3 1008 aa17.99■□□□□ 0.47
PTPRN-205ENST00000440552 TDRD7Q8NHU6 1098 aaKnown RBP17.99■□□□□ 0.47
PTPRN-205ENST00000440552 PTPN18Q99952 460 aa17.99■□□□□ 0.47
PTPRN-205ENST00000440552 POTEFA5A3E0 1075 aa17.98■□□□□ 0.47
PTPRN-205ENST00000440552 F6X3S4 739 aa17.98■□□□□ 0.47
PTPRN-205ENST00000440552 RBM5P52756 815 aaKnown RBP eCLIP17.98■□□□□ 0.47
PTPRN-205ENST00000440552 SP3Q02447 781 aa17.98■□□□□ 0.47
PTPRN-205ENST00000440552 TAF7LQ5H9L4 462 aa17.98■□□□□ 0.47
PTPRN-205ENST00000440552 CD99L2Q8TCZ2 262 aa17.98■□□□□ 0.47
PTPRN-205ENST00000440552 EFCC1Q9HA90 598 aa17.98■□□□□ 0.47
PTPRN-205ENST00000440552 CNNM1Q9NRU3 951 aa17.98■□□□□ 0.47
PTPRN-205ENST00000440552 ZNF70Q9UC06 446 aaPredicted RBP17.98■□□□□ 0.47
PTPRN-205ENST00000440552 JAG2Q9Y219 1238 aa17.98■□□□□ 0.47
PTPRN-205ENST00000440552 EXOSC9Q06265 439 aaKnown RBP17.97■□□□□ 0.47
PTPRN-205ENST00000440552 MFSD14BQ5SR56 506 aa17.97■□□□□ 0.47
PTPRN-205ENST00000440552 ZNF594Q96JF6 807 aaPredicted RBP17.97■□□□□ 0.47
PTPRN-205ENST00000440552 MS4A4AQ96JQ5 239 aa17.97■□□□□ 0.47
PTPRN-205ENST00000440552 TEPSINQ96N21 525 aa17.97■□□□□ 0.47
PTPRN-205ENST00000440552 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.97■□□□□ 0.47
PTPRN-205ENST00000440552 TTF2Q9UNY4 1162 aaKnown RBP17.97■□□□□ 0.47
PTPRN-205ENST00000440552 OTOFQ9HC10 1997 aa17.97■□□□□ 0.47
PTPRN-205ENST00000440552 PLIN1O60240 522 aa17.96■□□□□ 0.47
PTPRN-205ENST00000440552 ALDH1L1O75891 902 aa17.96■□□□□ 0.47
PTPRN-205ENST00000440552 HIBADHP31937 336 aaKnown RBP17.96■□□□□ 0.47
PTPRN-205ENST00000440552 OPTNQ96CV9 577 aa17.96■□□□□ 0.47
PTPRN-205ENST00000440552 FAM84BQ96KN1 310 aaPredicted RBP17.96■□□□□ 0.47
PTPRN-205ENST00000440552 ARHGEF6Q15052 776 aa17.95■□□□□ 0.46
PTPRN-205ENST00000440552 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.95■□□□□ 0.46
PTPRN-205ENST00000440552 DZIP1LQ8IYY4 767 aaKnown RBP17.95■□□□□ 0.46
PTPRN-205ENST00000440552 TDRD3Q9H7E2 651 aaKnown RBP17.95■□□□□ 0.46
PTPRN-205ENST00000440552 ELP3Q9H9T3 547 aa17.95■□□□□ 0.46
PTPRN-205ENST00000440552 CEP290O15078 2479 aa17.95■□□□□ 0.46
PTPRN-205ENST00000440552 ARAP2Q8WZ64 1704 aa17.95■□□□□ 0.46
PTPRN-205ENST00000440552 GYG1P46976 350 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms