RNA–Protein interactions for RNA: ENST00000440514.1

CPSF4-205, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-205ENST00000440514 USP17L8P0C7I0 530 aa22.32■■□□□ 1.16
CPSF4-205ENST00000440514 KIF4BQ2VIQ3 1234 aa22.32■■□□□ 1.16
CPSF4-205ENST00000440514 RBM26Q5T8P6 1007 aaKnown RBP22.32■■□□□ 1.16
CPSF4-205ENST00000440514 KIAA0825Q8IV33 1275 aa22.32■■□□□ 1.16
CPSF4-205ENST00000440514 FAM205AQ6ZU69 1335 aa22.31■■□□□ 1.16
CPSF4-205ENST00000440514 A0A1B0GUL7 405 aa22.31■■□□□ 1.16
CPSF4-205ENST00000440514 ZNF280AP59817 542 aaPredicted RBP22.31■■□□□ 1.16
CPSF4-205ENST00000440514 CHAF1AQ13111 956 aaPredicted RBP22.31■■□□□ 1.16
CPSF4-205ENST00000440514 SIRT2Q8IXJ6 389 aa22.31■■□□□ 1.16
CPSF4-205ENST00000440514 RPAP2Q8IXW5 612 aaPredicted RBP22.31■■□□□ 1.16
CPSF4-205ENST00000440514 NOP58Q9Y2X3 529 aaKnown RBP22.31■■□□□ 1.16
CPSF4-205ENST00000440514 HSPA6P17066 643 aa22.3■■□□□ 1.16
CPSF4-205ENST00000440514 TIMM10P62072 90 aa22.3■■□□□ 1.16
CPSF4-205ENST00000440514 EXOC6BQ9Y2D4 811 aa22.3■■□□□ 1.16
CPSF4-205ENST00000440514 AKAP2Q9Y2D5 859 aa22.3■■□□□ 1.16
CPSF4-205ENST00000440514 FRAT2O75474 233 aaPredicted RBP22.29■■□□□ 1.16
CPSF4-205ENST00000440514 PHKA1P46020 1223 aa22.29■■□□□ 1.16
CPSF4-205ENST00000440514 CRBNQ96SW2 442 aa22.29■■□□□ 1.16
CPSF4-205ENST00000440514 MYOZ2Q9NPC6 264 aa22.29■■□□□ 1.16
CPSF4-205ENST00000440514 F8W031 263 aaPredicted RBP22.28■■□□□ 1.16
CPSF4-205ENST00000440514 MFSD14BQ5SR56 506 aa22.28■■□□□ 1.16
CPSF4-205ENST00000440514 ASTN2O75129 1339 aaPredicted RBP22.28■■□□□ 1.16
CPSF4-205ENST00000440514 HMMRO75330 724 aa22.27■■□□□ 1.16
CPSF4-205ENST00000440514 FKBP1AP62942 108 aaKnown RBP22.27■■□□□ 1.16
CPSF4-205ENST00000440514 CNTROBQ8N137 903 aa22.27■■□□□ 1.16
CPSF4-205ENST00000440514 XAGE2Q96GT9 111 aa22.27■■□□□ 1.16
CPSF4-205ENST00000440514 NEUROD6Q96NK8 337 aa22.27■■□□□ 1.16
CPSF4-205ENST00000440514 ITGBL1O95965 494 aaPredicted RBP22.26■■□□□ 1.15
CPSF4-205ENST00000440514 CCDC102BQ68D86 513 aa22.26■■□□□ 1.15
CPSF4-205ENST00000440514 OGFOD1Q8N543 542 aa22.26■■□□□ 1.15
CPSF4-205ENST00000440514 PASKQ96RG2 1323 aa22.26■■□□□ 1.15
CPSF4-205ENST00000440514 GRIK5Q16478 980 aa22.25■■□□□ 1.15
CPSF4-205ENST00000440514 TNNI3KQ59H18 835 aa22.25■■□□□ 1.15
CPSF4-205ENST00000440514 ZC3H15Q8WU90 426 aaKnown RBP22.25■■□□□ 1.15
CPSF4-205ENST00000440514 GLIS2Q9BZE0 524 aaPredicted RBP22.25■■□□□ 1.15
CPSF4-205ENST00000440514 GGA3Q9NZ52 723 aa22.25■■□□□ 1.15
CPSF4-205ENST00000440514 PGAP2Q9UHJ9 254 aa22.25■■□□□ 1.15
CPSF4-205ENST00000440514 FPGT-TNNI3KV9GXZ4 949 aa22.25■■□□□ 1.15
CPSF4-205ENST00000440514 FMR1Q06787 632 aaKnown RBP eCLIP22.24■■□□□ 1.15
CPSF4-205ENST00000440514 GPR108Q9NPR9 543 aa22.24■■□□□ 1.15
CPSF4-205ENST00000440514 GNL3LQ9NVN8 582 aaKnown RBP22.24■■□□□ 1.15
CPSF4-205ENST00000440514 HDAC9Q9UKV0 1011 aa22.24■■□□□ 1.15
CPSF4-205ENST00000440514 APBB1O00213 710 aa22.23■■□□□ 1.15
CPSF4-205ENST00000440514 TRAF5O00463 557 aa22.23■■□□□ 1.15
CPSF4-205ENST00000440514 SCARF1Q14162 830 aa22.23■■□□□ 1.15
CPSF4-205ENST00000440514 SUPT16HQ9Y5B9 1047 aaKnown RBP22.23■■□□□ 1.15
CPSF4-205ENST00000440514 PCDHAC2Q9Y5I4 1007 aa22.23■■□□□ 1.15
CPSF4-205ENST00000440514 APLP1P51693 650 aa22.22■■□□□ 1.15
CPSF4-205ENST00000440514 HTRA3P83110 453 aa22.22■■□□□ 1.15
CPSF4-205ENST00000440514 RASGRF1Q13972 1273 aa22.22■■□□□ 1.15
CPSF4-205ENST00000440514 NBPF9Q3BBW0 867 aa22.22■■□□□ 1.15
CPSF4-205ENST00000440514 GORABQ5T7V8 394 aa22.22■■□□□ 1.15
CPSF4-205ENST00000440514 ERC1Q8IUD2 1116 aa22.22■■□□□ 1.15
CPSF4-205ENST00000440514 TBC1D22AQ8WUA7 517 aa22.22■■□□□ 1.15
CPSF4-205ENST00000440514 DBNDD2Q9BQY9 259 aa22.22■■□□□ 1.15
CPSF4-205ENST00000440514 TLR7Q9NYK1 1049 aaKnown RBP22.22■■□□□ 1.15
CPSF4-205ENST00000440514 TTF2Q9UNY4 1162 aaKnown RBP22.22■■□□□ 1.15
CPSF4-205ENST00000440514 ECM29Q5VYK3 1845 aa22.22■■□□□ 1.15
CPSF4-205ENST00000440514 ADM5C9JUS6 153 aa22.21■■□□□ 1.15
CPSF4-205ENST00000440514 SEMA3EO15041 775 aa22.21■■□□□ 1.15
CPSF4-205ENST00000440514 HSP90AB4PQ58FF6 505 aa22.21■■□□□ 1.15
CPSF4-205ENST00000440514 ANGEL2Q5VTE6 544 aaKnown RBP22.21■■□□□ 1.15
CPSF4-205ENST00000440514 TRPM7Q96QT4 1865 aa22.2■■□□□ 1.14
CPSF4-205ENST00000440514 POLR2AP24928 1970 aaKnown RBP22.2■■□□□ 1.14
CPSF4-205ENST00000440514 WNT10BO00744 389 aa22.2■■□□□ 1.14
CPSF4-205ENST00000440514 CFAP100Q494V2 611 aa22.2■■□□□ 1.14
CPSF4-205ENST00000440514 DLK2Q6UY11 383 aa22.2■■□□□ 1.14
CPSF4-205ENST00000440514 RHPN1Q8TCX5 695 aa22.2■■□□□ 1.14
CPSF4-205ENST00000440514 DCPSQ96C86 337 aaKnown RBP22.2■■□□□ 1.14
CPSF4-205ENST00000440514 EAF2Q96CJ1 260 aaPredicted RBP22.2■■□□□ 1.14
CPSF4-205ENST00000440514 ZBED3Q96IU2 234 aaPredicted RBP22.2■■□□□ 1.14
CPSF4-205ENST00000440514 IL1RAPL2Q9NP60 686 aa22.2■■□□□ 1.14
CPSF4-205ENST00000440514 DENND2AQ9ULE3 1009 aa22.2■■□□□ 1.14
CPSF4-205ENST00000440514 PCDHB15Q9Y5E8 787 aa22.2■■□□□ 1.14
CPSF4-205ENST00000440514 MMP14P50281 582 aa22.19■■□□□ 1.14
CPSF4-205ENST00000440514 DLGAP5Q15398 846 aa22.19■■□□□ 1.14
CPSF4-205ENST00000440514 USP48Q86UV5 1035 aa22.19■■□□□ 1.14
CPSF4-205ENST00000440514 WDR66Q8TBY9 1149 aa22.19■■□□□ 1.14
CPSF4-205ENST00000440514 CCDC8Q9H0W5 538 aaPredicted RBP22.19■■□□□ 1.14
CPSF4-205ENST00000440514 DBNLQ9UJU6 430 aaKnown RBP22.19■■□□□ 1.14
CPSF4-205ENST00000440514 SCAF8Q9UPN6 1271 aaKnown RBP22.19■■□□□ 1.14
CPSF4-205ENST00000440514 AOX1Q06278 1338 aa22.18■■□□□ 1.14
CPSF4-205ENST00000440514 ARID4AP29374 1257 aaPredicted RBP22.18■■□□□ 1.14
CPSF4-205ENST00000440514 PI16Q6UXB8 463 aa22.18■■□□□ 1.14
CPSF4-205ENST00000440514 CDC37L1Q7L3B6 337 aa22.18■■□□□ 1.14
CPSF4-205ENST00000440514 KRT26Q7Z3Y9 468 aa22.18■■□□□ 1.14
CPSF4-205ENST00000440514 PDS5AQ29RF7 1337 aaKnown RBP22.17■■□□□ 1.14
CPSF4-205ENST00000440514 SPDYE2BA6NHP3 402 aa22.17■■□□□ 1.14
CPSF4-205ENST00000440514 SPDYE6P0CI01 402 aa22.17■■□□□ 1.14
CPSF4-205ENST00000440514 PRDX5P30044 214 aa22.17■■□□□ 1.14
CPSF4-205ENST00000440514 RBM5P52756 815 aaKnown RBP eCLIP22.17■■□□□ 1.14
CPSF4-205ENST00000440514 AACSQ86V21 672 aa22.17■■□□□ 1.14
CPSF4-205ENST00000440514 MTMR14Q8NCE2 650 aa22.17■■□□□ 1.14
CPSF4-205ENST00000440514 KIF1BPQ96EK5 621 aa22.17■■□□□ 1.14
CPSF4-205ENST00000440514 BCL11AQ9H165 835 aa22.17■■□□□ 1.14
CPSF4-205ENST00000440514 HMG20BQ9P0W2 317 aa22.17■■□□□ 1.14
CPSF4-205ENST00000440514 PITPNM2Q9BZ72 1349 aa22.16■■□□□ 1.14
CPSF4-205ENST00000440514 SALL1Q9NSC2 1324 aa22.16■■□□□ 1.14
CPSF4-205ENST00000440514 ZBTB22O15209 634 aa22.16■■□□□ 1.14
CPSF4-205ENST00000440514 CRKP46108 304 aa22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms