RNA–Protein interactions for RNA: ENST00000440431.6

SCN3A-204, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5

Gene SCN3A, Length 4,146 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-204ENST00000440431 TNS1Q9HBL0 1735 aaKnown RBP5.3□□□□□ -1.56
SCN3A-204ENST00000440431 AKAP11Q9UKA4 1901 aa5.3□□□□□ -1.56
SCN3A-204ENST00000440431 OFD1O75665 1012 aa5.3□□□□□ -1.56
SCN3A-204ENST00000440431 HSPA1LP34931 641 aa5.3□□□□□ -1.56
SCN3A-204ENST00000440431 VPS72Q15906 364 aa5.3□□□□□ -1.56
SCN3A-204ENST00000440431 FAM98CQ17RN3 349 aaKnown RBP5.3□□□□□ -1.56
SCN3A-204ENST00000440431 TMEM132AQ24JP5 1023 aa5.3□□□□□ -1.56
SCN3A-204ENST00000440431 NUTM1Q86Y26 1132 aa5.3□□□□□ -1.56
SCN3A-204ENST00000440431 TBC1D22AQ8WUA7 517 aa5.3□□□□□ -1.56
SCN3A-204ENST00000440431 FEZ1Q99689 392 aa5.3□□□□□ -1.56
SCN3A-204ENST00000440431 CCDC8Q9H0W5 538 aaPredicted RBP5.3□□□□□ -1.56
SCN3A-204ENST00000440431 MYO5AQ9Y4I1 1855 aaKnown RBP5.3□□□□□ -1.56
SCN3A-204ENST00000440431 SMC2O95347 1197 aa5.29□□□□□ -1.56
SCN3A-204ENST00000440431 BAG4O95429 457 aaKnown RBP5.29□□□□□ -1.56
SCN3A-204ENST00000440431 BMP15O95972 392 aa5.29□□□□□ -1.56
SCN3A-204ENST00000440431 APBA3O96018 575 aa5.29□□□□□ -1.56
SCN3A-204ENST00000440431 PRIM1P49642 420 aaKnown RBP5.29□□□□□ -1.56
SCN3A-204ENST00000440431 ITPK1Q13572 414 aa5.29□□□□□ -1.56
SCN3A-204ENST00000440431 FOXD4L5Q5VV16 416 aaPredicted RBP5.29□□□□□ -1.56
SCN3A-204ENST00000440431 PPP4R3AQ6IN85 833 aa5.29□□□□□ -1.56
SCN3A-204ENST00000440431 NAA16Q6N069 864 aaPredicted RBP5.29□□□□□ -1.56
SCN3A-204ENST00000440431 TTC6Q86TZ1 520 aa5.29□□□□□ -1.56
SCN3A-204ENST00000440431 NCOA7Q8NI08 942 aa5.29□□□□□ -1.56
SCN3A-204ENST00000440431 FOXD4L4Q8WXT5 416 aaPredicted RBP5.29□□□□□ -1.56
SCN3A-204ENST00000440431 MTMR7Q9Y216 660 aa5.29□□□□□ -1.56
SCN3A-204ENST00000440431 RAD50Q92878 1312 aa5.29□□□□□ -1.56
SCN3A-204ENST00000440431 CALM1P0DP23 149 aa5.29□□□□□ -1.56
SCN3A-204ENST00000440431 CALM2P0DP24 149 aa5.29□□□□□ -1.56
SCN3A-204ENST00000440431 CALM3P0DP25 149 aa5.29□□□□□ -1.56
SCN3A-204ENST00000440431 CC2D2BQ6DHV5 1058 aa5.29□□□□□ -1.56
SCN3A-204ENST00000440431 MFSD6Q6ZSS7 791 aa5.29□□□□□ -1.56
SCN3A-204ENST00000440431 UNC5CLQ8IV45 518 aa5.29□□□□□ -1.56
SCN3A-204ENST00000440431 WDR66Q8TBY9 1149 aa5.29□□□□□ -1.56
SCN3A-204ENST00000440431 CNKSR2Q8WXI2 1034 aa5.29□□□□□ -1.56
SCN3A-204ENST00000440431 ESR2Q92731 530 aa5.29□□□□□ -1.56
SCN3A-204ENST00000440431 LRRC27Q9C0I9 530 aa5.29□□□□□ -1.56
SCN3A-204ENST00000440431 SLC12A7Q9Y666 1083 aa5.29□□□□□ -1.56
SCN3A-204ENST00000440431 USP42Q9H9J4 1324 aaKnown RBP5.29□□□□□ -1.56
SCN3A-204ENST00000440431 SPEF2Q9C093 1822 aa5.29□□□□□ -1.56
SCN3A-204ENST00000440431 IFIT3O14879 490 aaKnown RBP5.29□□□□□ -1.56
SCN3A-204ENST00000440431 SASH1O94885 1247 aa5.29□□□□□ -1.56
SCN3A-204ENST00000440431 ANAPC15P60006 121 aa5.29□□□□□ -1.56
SCN3A-204ENST00000440431 GCKRQ14397 625 aa5.29□□□□□ -1.56
SCN3A-204ENST00000440431 TMEM266Q2M3C6 531 aa5.29□□□□□ -1.56
SCN3A-204ENST00000440431 PI4K2BQ8TCG2 481 aa5.29□□□□□ -1.56
SCN3A-204ENST00000440431 CNKSR1Q969H4 720 aa5.29□□□□□ -1.56
SCN3A-204ENST00000440431 GZF1Q9H116 711 aaPredicted RBP5.29□□□□□ -1.56
SCN3A-204ENST00000440431 TNRC6CQ9HCJ0 1690 aaKnown RBP5.29□□□□□ -1.56
SCN3A-204ENST00000440431 H7C1W4 665 aa5.29□□□□□ -1.56
SCN3A-204ENST00000440431 RANBP6O60518 1105 aaKnown RBP5.29□□□□□ -1.56
SCN3A-204ENST00000440431 EIF6P56537 245 aaKnown RBP5.29□□□□□ -1.56
SCN3A-204ENST00000440431 CCDC96Q2M329 555 aa5.29□□□□□ -1.56
SCN3A-204ENST00000440431 GOLGA6L1Q8N7Z2 621 aa5.29□□□□□ -1.56
SCN3A-204ENST00000440431 ISCA1Q9BUE6 129 aa5.29□□□□□ -1.56
SCN3A-204ENST00000440431 STAP2Q9UGK3 403 aa5.29□□□□□ -1.56
SCN3A-204ENST00000440431 TSPY2A6NKD2 308 aa5.28□□□□□ -1.56
SCN3A-204ENST00000440431 EYA2O00167 538 aa5.28□□□□□ -1.56
SCN3A-204ENST00000440431 CCP110O43303 1012 aa5.28□□□□□ -1.56
SCN3A-204ENST00000440431 SLC4A3P48751 1232 aa5.28□□□□□ -1.56
SCN3A-204ENST00000440431 DNAJC10Q8IXB1 793 aa5.28□□□□□ -1.56
SCN3A-204ENST00000440431 SMARCE1Q969G3 411 aa5.28□□□□□ -1.56
SCN3A-204ENST00000440431 GTPBP4Q9BZE4 634 aaKnown RBP5.28□□□□□ -1.56
SCN3A-204ENST00000440431 SCAND2PQ9GZW5 306 aaPredicted RBP5.28□□□□□ -1.56
SCN3A-204ENST00000440431 KAT14Q9H8E8 782 aa5.28□□□□□ -1.56
SCN3A-204ENST00000440431 CCDC39Q9UFE4 941 aa5.28□□□□□ -1.56
SCN3A-204ENST00000440431 SPATA31A6Q5VVP1 1343 aa5.28□□□□□ -1.56
SCN3A-204ENST00000440431 GOLIM4O00461 696 aa5.28□□□□□ -1.56
SCN3A-204ENST00000440431 DESP17661 470 aa5.28□□□□□ -1.56
SCN3A-204ENST00000440431 CYP7A1P22680 504 aa5.28□□□□□ -1.56
SCN3A-204ENST00000440431 MCM5P33992 734 aa5.28□□□□□ -1.56
SCN3A-204ENST00000440431 HLFQ16534 295 aa5.28□□□□□ -1.56
SCN3A-204ENST00000440431 GRIPAP1Q4V328 841 aa5.28□□□□□ -1.56
SCN3A-204ENST00000440431 CCDC148Q8NFR7 591 aa5.28□□□□□ -1.56
SCN3A-204ENST00000440431 GGA1Q9UJY5 639 aa5.28□□□□□ -1.56
SCN3A-204ENST00000440431 PNMA2Q9UL42 364 aa5.28□□□□□ -1.56
SCN3A-204ENST00000440431 NSFL1CQ9UNZ2 370 aaKnown RBP5.28□□□□□ -1.56
SCN3A-204ENST00000440431 AOX1Q06278 1338 aa5.28□□□□□ -1.56
SCN3A-204ENST00000440431 UBN2Q6ZU65 1347 aa5.28□□□□□ -1.56
SCN3A-204ENST00000440431 EPB41L2O43491 1005 aaKnown RBP5.28□□□□□ -1.56
SCN3A-204ENST00000440431 PPP1R12BO60237 982 aaPredicted RBP5.28□□□□□ -1.56
SCN3A-204ENST00000440431 FGFR1OPO95684 399 aaKnown RBP5.28□□□□□ -1.56
SCN3A-204ENST00000440431 IL6STP40189 918 aaPredicted RBP5.28□□□□□ -1.56
SCN3A-204ENST00000440431 SSRP1Q08945 709 aaKnown RBP5.28□□□□□ -1.56
SCN3A-204ENST00000440431 TCIRG1Q13488 830 aa5.28□□□□□ -1.56
SCN3A-204ENST00000440431 ODF2Q5BJF6 829 aa5.28□□□□□ -1.56
SCN3A-204ENST00000440431 DHX37Q8IY37 1157 aaKnown RBP5.28□□□□□ -1.56
SCN3A-204ENST00000440431 TBC1D32Q96NH3 1257 aa5.28□□□□□ -1.56
SCN3A-204ENST00000440431 BICC1Q9H694 974 aaKnown RBP5.28□□□□□ -1.56
SCN3A-204ENST00000440431 LIMCH1Q9UPQ0 1083 aa5.28□□□□□ -1.56
SCN3A-204ENST00000440431 MROH5Q6ZUA9 1318 aa5.27□□□□□ -1.57
SCN3A-204ENST00000440431 LDHBP07195 334 aaKnown RBP5.27□□□□□ -1.57
SCN3A-204ENST00000440431 ATP2B1P20020 1258 aa5.27□□□□□ -1.57
SCN3A-204ENST00000440431 CCDC173Q0VFZ6 552 aa5.27□□□□□ -1.57
SCN3A-204ENST00000440431 SYCP1Q15431 976 aa5.27□□□□□ -1.57
SCN3A-204ENST00000440431 MCMDC2Q4G0Z9 681 aa5.27□□□□□ -1.57
SCN3A-204ENST00000440431 CT47A1Q5JQC4 288 aaPredicted RBP5.27□□□□□ -1.57
SCN3A-204ENST00000440431 STXBP4Q6ZWJ1 553 aa5.27□□□□□ -1.57
SCN3A-204ENST00000440431 KRT27Q7Z3Y8 459 aa5.27□□□□□ -1.57
SCN3A-204ENST00000440431 SYNE4Q8N205 404 aa5.27□□□□□ -1.57
SCN3A-204ENST00000440431 NAP1L4Q99733 375 aaKnown RBP5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms