RNA–Protein interactions for RNA: ENST00000439886.5

SMPD4-209, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,371 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-209ENST00000439886 PRR36Q9H6K5 1346 aa13.45□□□□□ -0.26
SMPD4-209ENST00000439886 YEATS2Q9ULM3 1422 aa13.45□□□□□ -0.26
SMPD4-209ENST00000439886 SASH1O94885 1247 aa13.45□□□□□ -0.26
SMPD4-209ENST00000439886 TPM1P09493 284 aa13.45□□□□□ -0.26
SMPD4-209ENST00000439886 SSR1P43307 286 aaKnown RBP13.45□□□□□ -0.26
SMPD4-209ENST00000439886 CC2D1AQ6P1N0 951 aaPredicted RBP13.45□□□□□ -0.26
SMPD4-209ENST00000439886 GDAP1L1Q96MZ0 367 aa13.45□□□□□ -0.26
SMPD4-209ENST00000439886 WDR24Q96S15 920 aa13.45□□□□□ -0.26
SMPD4-209ENST00000439886 ERBB3P21860 1342 aa13.45□□□□□ -0.26
SMPD4-209ENST00000439886 PSDA5PKW4 1024 aaPredicted RBP13.45□□□□□ -0.26
SMPD4-209ENST00000439886 PES1O00541 588 aaKnown RBP13.45□□□□□ -0.26
SMPD4-209ENST00000439886 MPHOSPH10O00566 681 aaKnown RBP13.45□□□□□ -0.26
SMPD4-209ENST00000439886 ABTB2Q8N961 1025 aa13.45□□□□□ -0.26
SMPD4-209ENST00000439886 PRAMEF22A3QJZ6 481 aa13.44□□□□□ -0.26
SMPD4-209ENST00000439886 RXRAP19793 462 aa13.44□□□□□ -0.26
SMPD4-209ENST00000439886 ZNF530Q6P9A1 599 aaPredicted RBP13.44□□□□□ -0.26
SMPD4-209ENST00000439886 CXorf56Q9H5V9 222 aa13.44□□□□□ -0.26
SMPD4-209ENST00000439886 BRMS1Q9HCU9 246 aa13.44□□□□□ -0.26
SMPD4-209ENST00000439886 AATKQ6ZMQ8 1374 aa13.44□□□□□ -0.26
SMPD4-209ENST00000439886 PPLO60437 1756 aa13.44□□□□□ -0.26
SMPD4-209ENST00000439886 INO80Q9ULG1 1556 aaPredicted RBP13.44□□□□□ -0.26
SMPD4-209ENST00000439886 MAP3K5Q99683 1374 aa13.44□□□□□ -0.26
SMPD4-209ENST00000439886 EFCAB8A8MWE9 144 aa13.44□□□□□ -0.26
SMPD4-209ENST00000439886 CBFA2T2O43439 604 aa13.44□□□□□ -0.26
SMPD4-209ENST00000439886 SYKP43405 635 aa13.44□□□□□ -0.26
SMPD4-209ENST00000439886 NEXNQ0ZGT2 675 aa13.44□□□□□ -0.26
SMPD4-209ENST00000439886 PNOCQ13519 176 aa13.44□□□□□ -0.26
SMPD4-209ENST00000439886 NSUN7Q8NE18 718 aaKnown RBP13.44□□□□□ -0.26
SMPD4-209ENST00000439886 GOLGA1Q92805 767 aa13.44□□□□□ -0.26
SMPD4-209ENST00000439886 HINFPQ9BQA5 517 aa13.44□□□□□ -0.26
SMPD4-209ENST00000439886 L2HGDHQ9H9P8 463 aa13.44□□□□□ -0.26
SMPD4-209ENST00000439886 PPP2R2CQ9Y2T4 447 aa13.44□□□□□ -0.26
SMPD4-209ENST00000439886 U3KPZ7 1027 aaPredicted RBP13.44□□□□□ -0.26
SMPD4-209ENST00000439886 LONRF2Q1L5Z9 754 aa13.43□□□□□ -0.26
SMPD4-209ENST00000439886 TRMT44Q8IYL2 757 aaKnown RBP13.43□□□□□ -0.26
SMPD4-209ENST00000439886 DHX58Q96C10 678 aa13.43□□□□□ -0.26
SMPD4-209ENST00000439886 BAG1Q99933 345 aaPredicted RBP13.43□□□□□ -0.26
SMPD4-209ENST00000439886 FANCLQ9NW38 375 aa13.43□□□□□ -0.26
SMPD4-209ENST00000439886 TADA3O75528 432 aa13.43□□□□□ -0.26
SMPD4-209ENST00000439886 AKAP17AQ02040 695 aaKnown RBP13.43□□□□□ -0.26
SMPD4-209ENST00000439886 OSBPL5Q9H0X9 879 aaPredicted RBP13.43□□□□□ -0.26
SMPD4-209ENST00000439886 SUGCTQ9HAC7 445 aa13.43□□□□□ -0.26
SMPD4-209ENST00000439886 CPS1P31327 1500 aa13.43□□□□□ -0.26
SMPD4-209ENST00000439886 DLG5Q8TDM6 1919 aa13.43□□□□□ -0.26
SMPD4-209ENST00000439886 A0A0G2JLW4 131 aa13.43□□□□□ -0.26
SMPD4-209ENST00000439886 TBC1D8O95759 1140 aa13.43□□□□□ -0.26
SMPD4-209ENST00000439886 CCDC158Q5M9N0 1113 aa13.43□□□□□ -0.26
SMPD4-209ENST00000439886 SRRTQ9BXP5 876 aaKnown RBP13.43□□□□□ -0.26
SMPD4-209ENST00000439886 SNRKQ9NRH2 765 aa13.43□□□□□ -0.26
SMPD4-209ENST00000439886 DONSONQ9NYP3 566 aa13.43□□□□□ -0.26
SMPD4-209ENST00000439886 TTC31Q49AM3 519 aaPredicted RBP13.42□□□□□ -0.26
SMPD4-209ENST00000439886 DHX32Q7L7V1 743 aaKnown RBP13.42□□□□□ -0.26
SMPD4-209ENST00000439886 CCDC82Q8N4S0 544 aa13.42□□□□□ -0.26
SMPD4-209ENST00000439886 GOLGA8BA8MQT2 603 aa13.42□□□□□ -0.26
SMPD4-209ENST00000439886 GRM8O00222 908 aa13.42□□□□□ -0.26
SMPD4-209ENST00000439886 NLRP12P59046 1061 aa13.42□□□□□ -0.26
SMPD4-209ENST00000439886 FKBP4Q02790 459 aaKnown RBP eCLIP13.42□□□□□ -0.26
SMPD4-209ENST00000439886 TFCP2Q12800 502 aa13.42□□□□□ -0.26
SMPD4-209ENST00000439886 ZNF827Q17R98 1081 aa13.42□□□□□ -0.26
SMPD4-209ENST00000439886 CCDC91Q7Z6B0 441 aa13.42□□□□□ -0.26
SMPD4-209ENST00000439886 MYD88Q99836 296 aa13.42□□□□□ -0.26
SMPD4-209ENST00000439886 DBNDD2Q9BQY9 259 aa13.42□□□□□ -0.26
SMPD4-209ENST00000439886 FAN1Q9Y2M0 1017 aa13.42□□□□□ -0.26
SMPD4-209ENST00000439886 MROH1Q8NDA8 1641 aa13.42□□□□□ -0.26
SMPD4-209ENST00000439886 WDHD1O75717 1129 aaPredicted RBP13.41□□□□□ -0.26
SMPD4-209ENST00000439886 LONRF3Q496Y0 759 aa13.41□□□□□ -0.26
SMPD4-209ENST00000439886 ZNF513Q8N8E2 541 aaPredicted RBP13.41□□□□□ -0.26
SMPD4-209ENST00000439886 DBF4Q9UBU7 674 aaPredicted RBP13.41□□□□□ -0.26
SMPD4-209ENST00000439886 ZNF330Q9Y3S2 320 aaPredicted RBP13.41□□□□□ -0.26
SMPD4-209ENST00000439886 ATP5J2-PTCD1G3V325 749 aa13.41□□□□□ -0.26
SMPD4-209ENST00000439886 PTCD1O75127 700 aaKnown RBP13.41□□□□□ -0.26
SMPD4-209ENST00000439886 PFKFB1P16118 471 aa13.41□□□□□ -0.26
SMPD4-209ENST00000439886 MCMDC2Q4G0Z9 681 aa13.41□□□□□ -0.26
SMPD4-209ENST00000439886 CNNM3Q8NE01 707 aa13.41□□□□□ -0.26
SMPD4-209ENST00000439886 PIK3R5Q8WYR1 880 aa13.41□□□□□ -0.26
SMPD4-209ENST00000439886 N4BP1O75113 896 aaKnown RBP13.41□□□□□ -0.26
SMPD4-209ENST00000439886 EIF3JO75822 258 aaKnown RBP13.41□□□□□ -0.26
SMPD4-209ENST00000439886 DDX58O95786 925 aaKnown RBP13.41□□□□□ -0.26
SMPD4-209ENST00000439886 C1orf141Q5JVX7 400 aa13.41□□□□□ -0.26
SMPD4-209ENST00000439886 ZNF569Q5MCW4 686 aa13.41□□□□□ -0.26
SMPD4-209ENST00000439886 ADALQ6DHV7 355 aa13.41□□□□□ -0.26
SMPD4-209ENST00000439886 FMR1NBQ8N0W7 255 aaPredicted RBP13.41□□□□□ -0.26
SMPD4-209ENST00000439886 GPR161Q8N6U8 529 aaKnown RBP13.41□□□□□ -0.26
SMPD4-209ENST00000439886 KLF18A0A0U1RQI7 1052 aa13.4□□□□□ -0.26
SMPD4-209ENST00000439886 CHMP4BP1P59074 171 aa13.4□□□□□ -0.26
SMPD4-209ENST00000439886 MYL5Q02045 173 aa13.4□□□□□ -0.26
SMPD4-209ENST00000439886 FOXR1Q6PIV2 292 aa13.4□□□□□ -0.26
SMPD4-209ENST00000439886 TOGARAM2Q6ZUX3 1019 aa13.4□□□□□ -0.26
SMPD4-209ENST00000439886 CLIC6Q96NY7 704 aa13.4□□□□□ -0.26
SMPD4-209ENST00000439886 ERLIN1O75477 346 aa13.4□□□□□ -0.26
SMPD4-209ENST00000439886 STX17P56962 302 aa13.4□□□□□ -0.26
SMPD4-209ENST00000439886 RALYLQ86SE5 291 aaKnown RBP13.4□□□□□ -0.26
SMPD4-209ENST00000439886 MICALL1Q8N3F8 863 aa13.4□□□□□ -0.26
SMPD4-209ENST00000439886 NEXMIFQ5QGS0 1516 aa13.4□□□□□ -0.26
SMPD4-209ENST00000439886 H3BQF6 201 aa13.4□□□□□ -0.26
SMPD4-209ENST00000439886 TFRCP02786 760 aaKnown RBP13.4□□□□□ -0.26
SMPD4-209ENST00000439886 CALRP27797 417 aaKnown RBP13.4□□□□□ -0.26
SMPD4-209ENST00000439886 NAA16Q6N069 864 aaPredicted RBP13.4□□□□□ -0.26
SMPD4-209ENST00000439886 GOLGA5Q8TBA6 731 aa13.4□□□□□ -0.26
SMPD4-209ENST00000439886 IL17RAQ96F46 866 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms