RNA–Protein interactions for RNA: ENST00000439600.2

LMO3-207, Transcript of LIM domain only 3, humanhuman

TSL 2

Gene LMO3, Length 1,044 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-207ENST00000439600 SUSD4Q5VX71 490 aa13.56□□□□□ -0.24
LMO3-207ENST00000439600 GDPD2Q9HCC8 539 aa13.56□□□□□ -0.24
LMO3-207ENST00000439600 TNNQ9UQP3 1299 aa13.56□□□□□ -0.24
LMO3-207ENST00000439600 UTYO14607 1347 aa13.56□□□□□ -0.24
LMO3-207ENST00000439600 SH3TC1Q8TE82 1336 aa13.56□□□□□ -0.24
LMO3-207ENST00000439600 CARMIL3Q8ND23 1372 aa13.56□□□□□ -0.24
LMO3-207ENST00000439600 GNAI2P04899 355 aa13.55□□□□□ -0.24
LMO3-207ENST00000439600 SERPINB2P05120 415 aa13.55□□□□□ -0.24
LMO3-207ENST00000439600 CTDSPL2Q05D32 466 aa13.55□□□□□ -0.24
LMO3-207ENST00000439600 DESI1Q6ICB0 168 aa13.55□□□□□ -0.24
LMO3-207ENST00000439600 WNT2BQ93097 391 aa13.55□□□□□ -0.24
LMO3-207ENST00000439600 HPS5Q9UPZ3 1129 aa13.55□□□□□ -0.24
LMO3-207ENST00000439600 NDUFB9Q9Y6M9 179 aa13.55□□□□□ -0.24
LMO3-207ENST00000439600 CFAP99D6REC4 459 aa13.54□□□□□ -0.24
LMO3-207ENST00000439600 ST5P78524 1137 aa13.54□□□□□ -0.24
LMO3-207ENST00000439600 SLC10A5Q5PT55 438 aa13.54□□□□□ -0.24
LMO3-207ENST00000439600 CRBNQ96SW2 442 aa13.54□□□□□ -0.24
LMO3-207ENST00000439600 ZBTB40Q9NUA8 1239 aa13.54□□□□□ -0.24
LMO3-207ENST00000439600 SLC27A5Q9Y2P5 690 aa13.54□□□□□ -0.24
LMO3-207ENST00000439600 CDHR2Q9BYE9 1310 aa13.54□□□□□ -0.24
LMO3-207ENST00000439600 TAF1LQ8IZX4 1826 aa13.53□□□□□ -0.24
LMO3-207ENST00000439600 MMP10P09238 476 aa13.53□□□□□ -0.24
LMO3-207ENST00000439600 UBE3BQ7Z3V4 1068 aa13.53□□□□□ -0.24
LMO3-207ENST00000439600 RPAP2Q8IXW5 612 aaPredicted RBP13.53□□□□□ -0.24
LMO3-207ENST00000439600 CNBD1Q8NA66 436 aa13.53□□□□□ -0.24
LMO3-207ENST00000439600 PRR7Q8TB68 274 aa13.53□□□□□ -0.24
LMO3-207ENST00000439600 FAM89AQ96GI7 184 aa13.53□□□□□ -0.24
LMO3-207ENST00000439600 PDZRN3Q9UPQ7 1066 aa13.53□□□□□ -0.24
LMO3-207ENST00000439600 UBN2Q6ZU65 1347 aa13.53□□□□□ -0.24
LMO3-207ENST00000439600 CACNA1FO60840 1977 aa13.52□□□□□ -0.24
LMO3-207ENST00000439600 FAM177BA6PVY3 158 aa13.52□□□□□ -0.25
LMO3-207ENST00000439600 POLRMTO00411 1230 aaKnown RBP13.52□□□□□ -0.25
LMO3-207ENST00000439600 IRS4O14654 1257 aaPredicted RBP13.52□□□□□ -0.25
LMO3-207ENST00000439600 PDE8AO60658 829 aa13.52□□□□□ -0.25
LMO3-207ENST00000439600 NTSR2O95665 410 aa13.52□□□□□ -0.25
LMO3-207ENST00000439600 NBPF7P0C2Y1 421 aaPredicted RBP13.52□□□□□ -0.25
LMO3-207ENST00000439600 NLRP3Q96P20 1036 aa13.52□□□□□ -0.25
LMO3-207ENST00000439600 MEIS3Q99687 375 aa13.52□□□□□ -0.25
LMO3-207ENST00000439600 PLA2G12BQ9BX93 195 aa13.52□□□□□ -0.25
LMO3-207ENST00000439600 MYH14Q7Z406 1995 aaKnown RBP13.51□□□□□ -0.25
LMO3-207ENST00000439600 EXOC6Q8TAG9 804 aa13.51□□□□□ -0.25
LMO3-207ENST00000439600 HMMRO75330 724 aa13.5□□□□□ -0.25
LMO3-207ENST00000439600 NR1I2O75469 434 aa13.5□□□□□ -0.25
LMO3-207ENST00000439600 ZBTB7AO95365 584 aa13.5□□□□□ -0.25
LMO3-207ENST00000439600 PDE6BP35913 854 aa13.5□□□□□ -0.25
LMO3-207ENST00000439600 ABL2P42684 1182 aa13.5□□□□□ -0.25
LMO3-207ENST00000439600 BCAMP50895 628 aa13.5□□□□□ -0.25
LMO3-207ENST00000439600 CASP7P55210 303 aa13.5□□□□□ -0.25
LMO3-207ENST00000439600 IRX6P78412 446 aaPredicted RBP13.5□□□□□ -0.25
LMO3-207ENST00000439600 PUS10Q3MIT2 529 aaKnown RBP13.5□□□□□ -0.25
LMO3-207ENST00000439600 MSL1Q68DK7 614 aa13.5□□□□□ -0.25
LMO3-207ENST00000439600 ZNF784Q8NCA9 323 aaPredicted RBP13.5□□□□□ -0.25
LMO3-207ENST00000439600 TSC1Q92574 1164 aa13.5□□□□□ -0.25
LMO3-207ENST00000439600 BRIP1Q9BX63 1249 aa13.5□□□□□ -0.25
LMO3-207ENST00000439600 SPON1Q9HCB6 807 aa13.5□□□□□ -0.25
LMO3-207ENST00000439600 NUP188Q5SRE5 1749 aa13.5□□□□□ -0.25
LMO3-207ENST00000439600 APLP1P51693 650 aa13.49□□□□□ -0.25
LMO3-207ENST00000439600 DDR1Q08345 913 aa13.49□□□□□ -0.25
LMO3-207ENST00000439600 ERFEQ4G0M1 354 aa13.49□□□□□ -0.25
LMO3-207ENST00000439600 PRR5LQ6MZQ0 368 aa13.49□□□□□ -0.25
LMO3-207ENST00000439600 SYMPKQ92797 1274 aaKnown RBP13.49□□□□□ -0.25
LMO3-207ENST00000439600 PDGFDQ9GZP0 370 aaPredicted RBP13.49□□□□□ -0.25
LMO3-207ENST00000439600 SERPINA10Q9UK55 444 aa13.49□□□□□ -0.25
LMO3-207ENST00000439600 PCDHB3Q9Y5E6 796 aa13.49□□□□□ -0.25
LMO3-207ENST00000439600 CSF1RP07333 972 aa13.48□□□□□ -0.25
LMO3-207ENST00000439600 ATP8B2P98198 1209 aa13.48□□□□□ -0.25
LMO3-207ENST00000439600 CCDC152Q4G0S7 254 aa13.48□□□□□ -0.25
LMO3-207ENST00000439600 CCDC82Q8N4S0 544 aa13.48□□□□□ -0.25
LMO3-207ENST00000439600 SUCLG2Q96I99 432 aa13.48□□□□□ -0.25
LMO3-207ENST00000439600 RWDD1Q9H446 243 aaPredicted RBP13.48□□□□□ -0.25
LMO3-207ENST00000439600 LRRFIP2Q9Y608 721 aaKnown RBP13.48□□□□□ -0.25
LMO3-207ENST00000439600 UBR3Q6ZT12 1888 aa13.48□□□□□ -0.25
LMO3-207ENST00000439600 HCLS1P14317 486 aaPredicted RBP13.47□□□□□ -0.25
LMO3-207ENST00000439600 C1QTNF8P60827 252 aa13.47□□□□□ -0.25
LMO3-207ENST00000439600 MTX1Q13505 466 aa13.47□□□□□ -0.25
LMO3-207ENST00000439600 SF3B3Q15393 1217 aaKnown RBP13.47□□□□□ -0.25
LMO3-207ENST00000439600 CCDC57Q2TAC2 916 aa13.47□□□□□ -0.25
LMO3-207ENST00000439600 RABL6Q3YEC7 729 aaPredicted RBP13.47□□□□□ -0.25
LMO3-207ENST00000439600 BRICD5Q6PL45 260 aa13.47□□□□□ -0.25
LMO3-207ENST00000439600 JARID2Q92833 1246 aaPredicted RBP13.47□□□□□ -0.25
LMO3-207ENST00000439600 ARID3AQ99856 593 aa13.47□□□□□ -0.25
LMO3-207ENST00000439600 TRIM34Q9BYJ4 488 aa13.47□□□□□ -0.25
LMO3-207ENST00000439600 HMX1Q9NP08 348 aaPredicted RBP13.47□□□□□ -0.25
LMO3-207ENST00000439600 KLRG2A4D1S0 409 aaPredicted RBP13.46□□□□□ -0.25
LMO3-207ENST00000439600 CTSWP56202 376 aa13.46□□□□□ -0.25
LMO3-207ENST00000439600 FOXO4P98177 505 aa13.46□□□□□ -0.25
LMO3-207ENST00000439600 IFIT5Q13325 482 aaKnown RBP13.46□□□□□ -0.25
LMO3-207ENST00000439600 WASHC4Q2M389 1173 aa13.46□□□□□ -0.25
LMO3-207ENST00000439600 LMBR1LQ6UX01 489 aa13.46□□□□□ -0.25
LMO3-207ENST00000439600 NYAP1Q6ZVC0 841 aa13.46□□□□□ -0.25
LMO3-207ENST00000439600 ANKRD44Q8N8A2 993 aa13.46□□□□□ -0.25
LMO3-207ENST00000439600 TTLL11Q8NHH1 800 aa13.46□□□□□ -0.25
LMO3-207ENST00000439600 CCDC97Q96F63 343 aaPredicted RBP13.46□□□□□ -0.25
LMO3-207ENST00000439600 USB1Q9BQ65 265 aaKnown RBP13.46□□□□□ -0.25
LMO3-207ENST00000439600 BICC1Q9H694 974 aaKnown RBP13.46□□□□□ -0.25
LMO3-207ENST00000439600 PLSCR2Q9NRY7 297 aa13.46□□□□□ -0.25
LMO3-207ENST00000439600 ANKRD18BA2A2Z9 1011 aa13.45□□□□□ -0.26
LMO3-207ENST00000439600 H0YIN7 160 aa13.45□□□□□ -0.26
LMO3-207ENST00000439600 SRGAP3O43295 1099 aa13.45□□□□□ -0.26
LMO3-207ENST00000439600 FMNL1O95466 1100 aaPredicted RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms