RNA–Protein interactions for RNA: ENST00000439406.5

HCG20-208, Transcript of HLA complex group 20, humanhuman

TSL 2 BASIC

Gene HCG20, Length 1,202 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG20-208ENST00000439406 FKBP4Q02790 459 aaKnown RBP eCLIP9.66□□□□□ -0.86
HCG20-208ENST00000439406 SLFNL1Q499Z3 407 aa9.66□□□□□ -0.86
HCG20-208ENST00000439406 LDLRAD1Q5T700 205 aa9.66□□□□□ -0.86
HCG20-208ENST00000439406 TMED8Q6PL24 325 aaPredicted RBP9.66□□□□□ -0.86
HCG20-208ENST00000439406 RBM19Q9Y4C8 960 aaKnown RBP9.66□□□□□ -0.86
HCG20-208ENST00000439406 P4HBP07237 508 aaKnown RBP9.65□□□□□ -0.86
HCG20-208ENST00000439406 POTEIP0CG38 1075 aa9.65□□□□□ -0.86
HCG20-208ENST00000439406 POTEJP0CG39 1038 aa9.65□□□□□ -0.86
HCG20-208ENST00000439406 NUDT18Q6ZVK8 323 aa9.65□□□□□ -0.86
HCG20-208ENST00000439406 TRIM50Q86XT4 487 aa9.65□□□□□ -0.86
HCG20-208ENST00000439406 GTF3C2Q8WUA4 911 aaPredicted RBP9.65□□□□□ -0.86
HCG20-208ENST00000439406 HLA-CQ95604 372 aa9.65□□□□□ -0.86
HCG20-208ENST00000439406 ZNF594Q96JF6 807 aaPredicted RBP9.65□□□□□ -0.86
HCG20-208ENST00000439406 BRIP1Q9BX63 1249 aa9.65□□□□□ -0.86
HCG20-208ENST00000439406 POLKQ9UBT6 870 aa9.65□□□□□ -0.86
HCG20-208ENST00000439406 FAM198AQ9UFP1 575 aa9.65□□□□□ -0.86
HCG20-208ENST00000439406 DICER1Q9UPY3 1922 aaKnown RBP9.64□□□□□ -0.87
HCG20-208ENST00000439406 WDR33Q9C0J8 1336 aaKnown RBP9.64□□□□□ -0.87
HCG20-208ENST00000439406 ATP1A2P50993 1020 aa9.64□□□□□ -0.87
HCG20-208ENST00000439406 ARHGAP4P98171 946 aa9.64□□□□□ -0.87
HCG20-208ENST00000439406 EIF4A2Q14240 407 aaKnown RBP9.64□□□□□ -0.87
HCG20-208ENST00000439406 EML3Q32P44 896 aa9.64□□□□□ -0.87
HCG20-208ENST00000439406 C1orf141Q5JVX7 400 aa9.64□□□□□ -0.87
HCG20-208ENST00000439406 PNMA8AQ86V59 439 aaPredicted RBP9.64□□□□□ -0.87
HCG20-208ENST00000439406 ZNF622Q969S3 477 aaKnown RBP eCLIP9.64□□□□□ -0.87
HCG20-208ENST00000439406 PRIMPOLQ96LW4 560 aa9.64□□□□□ -0.87
HCG20-208ENST00000439406 CARD14Q9BXL6 1004 aa9.64□□□□□ -0.87
HCG20-208ENST00000439406 TAOK3Q9H2K8 898 aa9.64□□□□□ -0.87
HCG20-208ENST00000439406 TAF1DQ9H5J8 278 aaPredicted RBP9.64□□□□□ -0.87
HCG20-208ENST00000439406 PIF1Q9H611 641 aa9.64□□□□□ -0.87
HCG20-208ENST00000439406 VIRMAQ69YN4 1812 aaKnown RBP9.63□□□□□ -0.87
HCG20-208ENST00000439406 SOS1Q07889 1333 aaPredicted RBP9.63□□□□□ -0.87
HCG20-208ENST00000439406 FMNL1O95466 1100 aaPredicted RBP9.63□□□□□ -0.87
HCG20-208ENST00000439406 NEFLP07196 543 aa9.63□□□□□ -0.87
HCG20-208ENST00000439406 CYP19A1P11511 503 aaPredicted RBP9.63□□□□□ -0.87
HCG20-208ENST00000439406 DNAJA1P31689 397 aaKnown RBP9.63□□□□□ -0.87
HCG20-208ENST00000439406 ECM1Q16610 540 aa9.63□□□□□ -0.87
HCG20-208ENST00000439406 ZNF530Q6P9A1 599 aaPredicted RBP9.63□□□□□ -0.87
HCG20-208ENST00000439406 CNKSR1Q969H4 720 aa9.63□□□□□ -0.87
HCG20-208ENST00000439406 GMLQ99445 158 aa9.63□□□□□ -0.87
HCG20-208ENST00000439406 PRDM16Q9HAZ2 1276 aa9.63□□□□□ -0.87
HCG20-208ENST00000439406 DNAAF2Q9NVR5 837 aaKnown RBP9.63□□□□□ -0.87
HCG20-208ENST00000439406 KLHL42Q9P2K6 505 aa9.63□□□□□ -0.87
HCG20-208ENST00000439406 NRXN2Q9P2S2 1712 aa9.62□□□□□ -0.87
HCG20-208ENST00000439406 SCN4AP35499 1836 aa9.62□□□□□ -0.87
HCG20-208ENST00000439406 A0A087WZG4 1122 aa9.62□□□□□ -0.87
HCG20-208ENST00000439406 NBPF26B4DH59 902 aa9.62□□□□□ -0.87
HCG20-208ENST00000439406 PER1O15534 1290 aaPredicted RBP9.62□□□□□ -0.87
HCG20-208ENST00000439406 ECE1P42892 770 aa9.62□□□□□ -0.87
HCG20-208ENST00000439406 RBL2Q08999 1139 aa9.62□□□□□ -0.87
HCG20-208ENST00000439406 CNTROBQ8N137 903 aa9.62□□□□□ -0.87
HCG20-208ENST00000439406 ZNF454Q8N9F8 522 aa9.62□□□□□ -0.87
HCG20-208ENST00000439406 PLPP7Q8NBV4 271 aa9.62□□□□□ -0.87
HCG20-208ENST00000439406 BRINP2Q9C0B6 783 aa9.62□□□□□ -0.87
HCG20-208ENST00000439406 BCL2L12Q9HB09 334 aa9.62□□□□□ -0.87
HCG20-208ENST00000439406 TIAM2Q8IVF5 1701 aa9.62□□□□□ -0.87
HCG20-208ENST00000439406 AFDNP55196 1824 aaKnown RBP9.61□□□□□ -0.87
HCG20-208ENST00000439406 DLEC1Q9Y238 1755 aa9.61□□□□□ -0.87
HCG20-208ENST00000439406 PLCG2P16885 1265 aa9.61□□□□□ -0.87
HCG20-208ENST00000439406 FANCCQ00597 558 aa9.61□□□□□ -0.87
HCG20-208ENST00000439406 OCLNQ16625 522 aa9.61□□□□□ -0.87
HCG20-208ENST00000439406 RNF187Q5TA31 235 aaPredicted RBP9.61□□□□□ -0.87
HCG20-208ENST00000439406 STYK1Q6J9G0 422 aa9.61□□□□□ -0.87
HCG20-208ENST00000439406 DNAJC10Q8IXB1 793 aa9.61□□□□□ -0.87
HCG20-208ENST00000439406 EXOC8Q8IYI6 725 aa9.61□□□□□ -0.87
HCG20-208ENST00000439406 VTI1AQ96AJ9 217 aa9.61□□□□□ -0.87
HCG20-208ENST00000439406 ACBD3Q9H3P7 528 aa9.61□□□□□ -0.87
HCG20-208ENST00000439406 HACL1Q9UJ83 578 aa9.61□□□□□ -0.87
HCG20-208ENST00000439406 PNMA3Q9UL41 463 aa9.61□□□□□ -0.87
HCG20-208ENST00000439406 NOP58Q9Y2X3 529 aaKnown RBP9.61□□□□□ -0.87
HCG20-208ENST00000439406 PCDHGA4Q9Y5G9 962 aa9.61□□□□□ -0.87
HCG20-208ENST00000439406 DNMT3AQ9Y6K1 912 aaPredicted RBP9.61□□□□□ -0.87
HCG20-208ENST00000439406 KIF20BQ96Q89 1820 aa9.61□□□□□ -0.87
HCG20-208ENST00000439406 FER1L6Q2WGJ9 1857 aa9.6□□□□□ -0.87
HCG20-208ENST00000439406 CA12O43570 354 aa9.6□□□□□ -0.87
HCG20-208ENST00000439406 GABBR2O75899 941 aa9.6□□□□□ -0.87
HCG20-208ENST00000439406 DEKP35659 375 aaKnown RBP9.6□□□□□ -0.87
HCG20-208ENST00000439406 MAP2K2P36507 400 aa9.6□□□□□ -0.87
HCG20-208ENST00000439406 ZNF76P36508 570 aa9.6□□□□□ -0.87
HCG20-208ENST00000439406 KCNH2Q12809 1159 aa9.6□□□□□ -0.87
HCG20-208ENST00000439406 TCEAL1Q15170 157 aa9.6□□□□□ -0.87
HCG20-208ENST00000439406 GRIPAP1Q4V328 841 aa9.6□□□□□ -0.87
HCG20-208ENST00000439406 IER5LQ5T953 404 aa9.6□□□□□ -0.87
HCG20-208ENST00000439406 CEP126Q9P2H0 1117 aa9.6□□□□□ -0.87
HCG20-208ENST00000439406 ADAMTS7Q9UKP4 1686 aa9.6□□□□□ -0.87
HCG20-208ENST00000439406 SORBS3O60504 671 aa9.59□□□□□ -0.87
HCG20-208ENST00000439406 EPHX2P34913 555 aa9.59□□□□□ -0.87
HCG20-208ENST00000439406 CLDN10P78369 228 aa9.59□□□□□ -0.87
HCG20-208ENST00000439406 ARID5AQ03989 594 aa9.59□□□□□ -0.87
HCG20-208ENST00000439406 MAP7D1Q3KQU3 841 aa9.59□□□□□ -0.87
HCG20-208ENST00000439406 MASTLQ96GX5 879 aa9.59□□□□□ -0.87
HCG20-208ENST00000439406 GPR101Q96P66 508 aaPredicted RBP9.59□□□□□ -0.87
HCG20-208ENST00000439406 ADAM33Q9BZ11 813 aa9.59□□□□□ -0.87
HCG20-208ENST00000439406 OSBPL2Q9H1P3 480 aa9.59□□□□□ -0.87
HCG20-208ENST00000439406 SLC52A2Q9HAB3 445 aa9.59□□□□□ -0.87
HCG20-208ENST00000439406 PARP2Q9UGN5 583 aa9.59□□□□□ -0.87
HCG20-208ENST00000439406 ABT1Q9ULW3 272 aaKnown RBP9.59□□□□□ -0.87
HCG20-208ENST00000439406 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.59□□□□□ -0.87
HCG20-208ENST00000439406 COL15A1P39059 1388 aa9.59□□□□□ -0.87
HCG20-208ENST00000439406 ANKRD26Q9UPS8 1709 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms