RNA–Protein interactions for RNA: ENST00000439176.5

ERCC8-203, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 5

Gene ERCC8, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-203ENST00000439176 USP48Q86UV5 1035 aa8.69□□□□□ -1.02
ERCC8-203ENST00000439176 SULF1Q8IWU6 871 aa8.69□□□□□ -1.02
ERCC8-203ENST00000439176 WWC1Q8IX03 1113 aa8.69□□□□□ -1.02
ERCC8-203ENST00000439176 PI4KAP1Q8N8J0 262 aa8.69□□□□□ -1.02
ERCC8-203ENST00000439176 C2orf69Q8N8R5 385 aa8.69□□□□□ -1.02
ERCC8-203ENST00000439176 TRPM4Q8TD43 1214 aa8.69□□□□□ -1.02
ERCC8-203ENST00000439176 CCDC85AQ96PX6 553 aaPredicted RBP8.69□□□□□ -1.02
ERCC8-203ENST00000439176 IRX2Q9BZI1 471 aaPredicted RBP8.69□□□□□ -1.02
ERCC8-203ENST00000439176 SEC31BQ9NQW1 1179 aa8.69□□□□□ -1.02
ERCC8-203ENST00000439176 EMILIN3Q9NT22 766 aa8.69□□□□□ -1.02
ERCC8-203ENST00000439176 XDHP47989 1333 aa8.69□□□□□ -1.02
ERCC8-203ENST00000439176 DDX60Q8IY21 1712 aaKnown RBP8.68□□□□□ -1.02
ERCC8-203ENST00000439176 TRPM7Q96QT4 1865 aa8.68□□□□□ -1.02
ERCC8-203ENST00000439176 VIL1P09327 827 aaKnown RBP8.68□□□□□ -1.02
ERCC8-203ENST00000439176 HSPA8P11142 646 aaKnown RBP8.68□□□□□ -1.02
ERCC8-203ENST00000439176 IGHMBP2P38935 993 aaKnown RBP8.68□□□□□ -1.02
ERCC8-203ENST00000439176 CTSWP56202 376 aa8.68□□□□□ -1.02
ERCC8-203ENST00000439176 HUNKP57058 714 aa8.68□□□□□ -1.02
ERCC8-203ENST00000439176 NOGQ13253 232 aa8.68□□□□□ -1.02
ERCC8-203ENST00000439176 KIF4BQ2VIQ3 1234 aa8.68□□□□□ -1.02
ERCC8-203ENST00000439176 PODNQ7Z5L7 613 aa8.68□□□□□ -1.02
ERCC8-203ENST00000439176 TSPYL6Q8N831 410 aa8.68□□□□□ -1.02
ERCC8-203ENST00000439176 AGBL3Q8NEM8 1001 aa8.68□□□□□ -1.02
ERCC8-203ENST00000439176 TSR2Q969E8 191 aaKnown RBP8.68□□□□□ -1.02
ERCC8-203ENST00000439176 MYH16Q9H6N6 1097 aa8.68□□□□□ -1.02
ERCC8-203ENST00000439176 MRS2Q9HD23 443 aa8.68□□□□□ -1.02
ERCC8-203ENST00000439176 ARIH1Q9Y4X5 557 aaPredicted RBP8.68□□□□□ -1.02
ERCC8-203ENST00000439176 IL16Q14005 1332 aa8.68□□□□□ -1.02
ERCC8-203ENST00000439176 LRRC37AA6NMS7 1700 aa8.68□□□□□ -1.02
ERCC8-203ENST00000439176 TAF1P21675 1872 aa8.68□□□□□ -1.02
ERCC8-203ENST00000439176 BRPF1P55201 1214 aaPredicted RBP8.67□□□□□ -1.02
ERCC8-203ENST00000439176 FKBP5Q13451 457 aaPredicted RBP8.67□□□□□ -1.02
ERCC8-203ENST00000439176 RSBN1LQ6PCB5 846 aaPredicted RBP8.67□□□□□ -1.02
ERCC8-203ENST00000439176 OGFOD1Q8N543 542 aa8.67□□□□□ -1.02
ERCC8-203ENST00000439176 TTLL11Q8NHH1 800 aa8.67□□□□□ -1.02
ERCC8-203ENST00000439176 JARID2Q92833 1246 aaPredicted RBP8.67□□□□□ -1.02
ERCC8-203ENST00000439176 CCDC102AQ96A19 550 aa8.67□□□□□ -1.02
ERCC8-203ENST00000439176 MPHOSPH8Q99549 860 aa8.67□□□□□ -1.02
ERCC8-203ENST00000439176 DUOX1Q9NRD9 1551 aa8.67□□□□□ -1.02
ERCC8-203ENST00000439176 BSDC1Q9NW68 430 aaPredicted RBP8.67□□□□□ -1.02
ERCC8-203ENST00000439176 RTL9Q8NET4 1388 aa8.66□□□□□ -1.02
ERCC8-203ENST00000439176 SHTN1A0MZ66 631 aa8.66□□□□□ -1.02
ERCC8-203ENST00000439176 USP17L3A6NCW0 530 aa8.66□□□□□ -1.02
ERCC8-203ENST00000439176 USP17L4A6NCW7 530 aa8.66□□□□□ -1.02
ERCC8-203ENST00000439176 NEURL1BA8MQ27 555 aa8.66□□□□□ -1.02
ERCC8-203ENST00000439176 TBC1D12O60347 775 aa8.66□□□□□ -1.02
ERCC8-203ENST00000439176 AOC2O75106 756 aa8.66□□□□□ -1.02
ERCC8-203ENST00000439176 IGKV5-2P06315 115 aa8.66□□□□□ -1.02
ERCC8-203ENST00000439176 USP17L8P0C7I0 530 aa8.66□□□□□ -1.02
ERCC8-203ENST00000439176 CWF19L2Q2TBE0 894 aaKnown RBP8.66□□□□□ -1.02
ERCC8-203ENST00000439176 POTEEQ6S8J3 1075 aa8.66□□□□□ -1.02
ERCC8-203ENST00000439176 USP17L1Q7RTZ2 530 aa8.66□□□□□ -1.02
ERCC8-203ENST00000439176 UBE3BQ7Z3V4 1068 aa8.66□□□□□ -1.02
ERCC8-203ENST00000439176 WDR63Q8IWG1 891 aa8.66□□□□□ -1.02
ERCC8-203ENST00000439176 ANKRD2Q9GZV1 360 aa8.66□□□□□ -1.02
ERCC8-203ENST00000439176 GBA2Q9HCG7 927 aaPredicted RBP8.66□□□□□ -1.02
ERCC8-203ENST00000439176 KCNQ5Q9NR82 932 aa8.66□□□□□ -1.02
ERCC8-203ENST00000439176 MYO3BQ8WXR4 1341 aa8.65□□□□□ -1.02
ERCC8-203ENST00000439176 KCNJ4P48050 445 aa8.65□□□□□ -1.02
ERCC8-203ENST00000439176 MMP14P50281 582 aa8.65□□□□□ -1.02
ERCC8-203ENST00000439176 ZNF157P51786 506 aaPredicted RBP8.65□□□□□ -1.02
ERCC8-203ENST00000439176 ZNF280AP59817 542 aaPredicted RBP8.65□□□□□ -1.02
ERCC8-203ENST00000439176 FLIIQ13045 1269 aa8.65□□□□□ -1.02
ERCC8-203ENST00000439176 SCARF1Q14162 830 aa8.65□□□□□ -1.02
ERCC8-203ENST00000439176 RGMBQ6NW40 437 aa8.65□□□□□ -1.02
ERCC8-203ENST00000439176 DNAAF4Q8WXU2 420 aa8.65□□□□□ -1.02
ERCC8-203ENST00000439176 FBXW7Q969H0 707 aa8.65□□□□□ -1.02
ERCC8-203ENST00000439176 GREM2Q9H772 168 aa8.65□□□□□ -1.02
ERCC8-203ENST00000439176 GGA3Q9NZ52 723 aa8.65□□□□□ -1.02
ERCC8-203ENST00000439176 MINPP1Q9UNW1 487 aa8.65□□□□□ -1.02
ERCC8-203ENST00000439176 LEMD3Q9Y2U8 911 aa8.65□□□□□ -1.02
ERCC8-203ENST00000439176 MED23Q9ULK4 1368 aa8.64□□□□□ -1.03
ERCC8-203ENST00000439176 ADM5C9JUS6 153 aa8.64□□□□□ -1.03
ERCC8-203ENST00000439176 H7C1W4 665 aa8.64□□□□□ -1.03
ERCC8-203ENST00000439176 EGFRP00533 1210 aa8.64□□□□□ -1.03
ERCC8-203ENST00000439176 NUDT7P0C024 238 aa8.64□□□□□ -1.03
ERCC8-203ENST00000439176 ITGA6P23229 1130 aa8.64□□□□□ -1.03
ERCC8-203ENST00000439176 CCT4P50991 539 aaKnown RBP8.64□□□□□ -1.03
ERCC8-203ENST00000439176 FKBP1BP68106 108 aa8.64□□□□□ -1.03
ERCC8-203ENST00000439176 GCKRQ14397 625 aa8.64□□□□□ -1.03
ERCC8-203ENST00000439176 ANGEL2Q5VTE6 544 aaKnown RBP8.64□□□□□ -1.03
ERCC8-203ENST00000439176 LINS1Q8NG48 757 aa8.64□□□□□ -1.03
ERCC8-203ENST00000439176 ABHD8Q96I13 439 aa8.64□□□□□ -1.03
ERCC8-203ENST00000439176 PLA2G12BQ9BX93 195 aa8.64□□□□□ -1.03
ERCC8-203ENST00000439176 COA1Q9GZY4 146 aa8.64□□□□□ -1.03
ERCC8-203ENST00000439176 MYOZ2Q9NPC6 264 aa8.64□□□□□ -1.03
ERCC8-203ENST00000439176 HDAC9Q9UKV0 1011 aa8.64□□□□□ -1.03
ERCC8-203ENST00000439176 SALL2Q9Y467 1007 aaPredicted RBP8.64□□□□□ -1.03
ERCC8-203ENST00000439176 ZNF804BA4D1E1 1349 aa8.63□□□□□ -1.03
ERCC8-203ENST00000439176 PITPNM2Q9BZ72 1349 aa8.63□□□□□ -1.03
ERCC8-203ENST00000439176 FANCIQ9NVI1 1328 aa8.63□□□□□ -1.03
ERCC8-203ENST00000439176 ANKRD18BA2A2Z9 1011 aa8.63□□□□□ -1.03
ERCC8-203ENST00000439176 NF2P35240 595 aa8.63□□□□□ -1.03
ERCC8-203ENST00000439176 IFIT5Q13325 482 aaKnown RBP8.63□□□□□ -1.03
ERCC8-203ENST00000439176 CCDC184Q52MB2 194 aa8.63□□□□□ -1.03
ERCC8-203ENST00000439176 STRIP1Q5VSL9 837 aa8.63□□□□□ -1.03
ERCC8-203ENST00000439176 ADGRD1Q6QNK2 874 aa8.63□□□□□ -1.03
ERCC8-203ENST00000439176 G2E3Q7L622 706 aa8.63□□□□□ -1.03
ERCC8-203ENST00000439176 CDCA5Q96FF9 252 aa8.63□□□□□ -1.03
ERCC8-203ENST00000439176 TSKSQ9UJT2 592 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms