RNA–Protein interactions for RNA: ENST00000439160.6

TCOF1-205, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,644 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-205ENST00000439160 ZBTB38Q8NAP3 1195 aaPredicted RBP14.14□□□□□ -0.15
TCOF1-205ENST00000439160 PDCL3Q9H2J4 239 aa14.14□□□□□ -0.15
TCOF1-205ENST00000439160 ANO6Q4KMQ2 910 aa14.14□□□□□ -0.15
TCOF1-205ENST00000439160 ABCA6Q8N139 1617 aa14.14□□□□□ -0.15
TCOF1-205ENST00000439160 SPATA5Q8NB90 893 aa14.14□□□□□ -0.15
TCOF1-205ENST00000439160 PUS3Q9BZE2 481 aaKnown RBP14.14□□□□□ -0.15
TCOF1-205ENST00000439160 ZNF532Q9HCE3 1301 aa14.14□□□□□ -0.15
TCOF1-205ENST00000439160 TNNT3P45378 269 aaPredicted RBP14.13□□□□□ -0.15
TCOF1-205ENST00000439160 GNAQP50148 359 aa14.13□□□□□ -0.15
TCOF1-205ENST00000439160 KCNQ4P56696 695 aa14.13□□□□□ -0.15
TCOF1-205ENST00000439160 ARHGAP29Q52LW3 1261 aa14.13□□□□□ -0.15
TCOF1-205ENST00000439160 WDR78Q5VTH9 848 aa14.13□□□□□ -0.15
TCOF1-205ENST00000439160 ANKARQ7Z5J8 1434 aa14.13□□□□□ -0.15
TCOF1-205ENST00000439160 DNAJC25Q9H1X3 360 aa14.13□□□□□ -0.15
TCOF1-205ENST00000439160 TRMT1Q9NXH9 659 aaKnown RBP14.13□□□□□ -0.15
TCOF1-205ENST00000439160 CYP27B1O15528 508 aa14.13□□□□□ -0.15
TCOF1-205ENST00000439160 OTUD7BQ6GQQ9 843 aa14.13□□□□□ -0.15
TCOF1-205ENST00000439160 RUFY1Q96T51 708 aa14.13□□□□□ -0.15
TCOF1-205ENST00000439160 TLR7Q9NYK1 1049 aaKnown RBP14.13□□□□□ -0.15
TCOF1-205ENST00000439160 PCCAP05165 728 aaPredicted RBP14.13□□□□□ -0.15
TCOF1-205ENST00000439160 CALML4Q96GE6 196 aa14.13□□□□□ -0.15
TCOF1-205ENST00000439160 COPRSQ9NQ92 184 aa14.13□□□□□ -0.15
TCOF1-205ENST00000439160 SAP30BPQ9UHR5 308 aaKnown RBP14.13□□□□□ -0.15
TCOF1-205ENST00000439160 TRIM75PA6NK02 468 aa14.12□□□□□ -0.15
TCOF1-205ENST00000439160 HSP90B2PQ58FF3 399 aa14.12□□□□□ -0.15
TCOF1-205ENST00000439160 TMC6Q7Z403 805 aa14.12□□□□□ -0.15
TCOF1-205ENST00000439160 PLCG2P16885 1265 aa14.12□□□□□ -0.15
TCOF1-205ENST00000439160 NAPAP54920 295 aa14.12□□□□□ -0.15
TCOF1-205ENST00000439160 RPS8P62241 208 aaKnown RBP14.12□□□□□ -0.15
TCOF1-205ENST00000439160 MYL10Q9BUA6 226 aa14.12□□□□□ -0.15
TCOF1-205ENST00000439160 GREM2Q9H772 168 aa14.12□□□□□ -0.15
TCOF1-205ENST00000439160 LUC7LQ9NQ29 371 aaKnown RBP14.12□□□□□ -0.15
TCOF1-205ENST00000439160 AATFQ9NY61 560 aaKnown RBP eCLIP14.12□□□□□ -0.15
TCOF1-205ENST00000439160 MAP3K15Q6ZN16 1313 aa14.12□□□□□ -0.15
TCOF1-205ENST00000439160 MROH5Q6ZUA9 1318 aa14.12□□□□□ -0.15
TCOF1-205ENST00000439160 MYO1BO43795 1136 aa14.12□□□□□ -0.15
TCOF1-205ENST00000439160 DBNLQ9UJU6 430 aaKnown RBP14.12□□□□□ -0.15
TCOF1-205ENST00000439160 ANGEL1Q9UNK9 670 aaKnown RBP14.12□□□□□ -0.15
TCOF1-205ENST00000439160 TTLL12Q14166 644 aaPredicted RBP14.11□□□□□ -0.15
TCOF1-205ENST00000439160 TNIP1Q15025 636 aa14.11□□□□□ -0.15
TCOF1-205ENST00000439160 TEX11Q8IYF3 940 aa14.11□□□□□ -0.15
TCOF1-205ENST00000439160 RBM17Q96I25 401 aaKnown RBP14.11□□□□□ -0.15
TCOF1-205ENST00000439160 SEPT11Q9NVA2 429 aaKnown RBP14.11□□□□□ -0.15
TCOF1-205ENST00000439160 SPATA31A3Q5VYP0 1347 aa14.11□□□□□ -0.15
TCOF1-205ENST00000439160 PTPN14Q15678 1187 aa14.11□□□□□ -0.15
TCOF1-205ENST00000439160 CCDC178Q5BJE1 867 aa14.11□□□□□ -0.15
TCOF1-205ENST00000439160 GIGYF2Q6Y7W6 1299 aaKnown RBP14.11□□□□□ -0.15
TCOF1-205ENST00000439160 FAM200AQ8TCP9 573 aa14.11□□□□□ -0.15
TCOF1-205ENST00000439160 VEZTQ9HBM0 779 aa14.11□□□□□ -0.15
TCOF1-205ENST00000439160 DCAF8L1A6NGE4 600 aa14.11□□□□□ -0.15
TCOF1-205ENST00000439160 CCDC148Q8NFR7 591 aa14.11□□□□□ -0.15
TCOF1-205ENST00000439160 CALM1P0DP23 149 aa14.11□□□□□ -0.15
TCOF1-205ENST00000439160 CALM2P0DP24 149 aa14.11□□□□□ -0.15
TCOF1-205ENST00000439160 CALM3P0DP25 149 aa14.11□□□□□ -0.15
TCOF1-205ENST00000439160 CTDSPL2Q05D32 466 aa14.11□□□□□ -0.15
TCOF1-205ENST00000439160 ZNF830Q96NB3 372 aaPredicted RBP14.11□□□□□ -0.15
TCOF1-205ENST00000439160 JAK2O60674 1132 aa14.1□□□□□ -0.15
TCOF1-205ENST00000439160 CRKLP46109 303 aaKnown RBP14.1□□□□□ -0.15
TCOF1-205ENST00000439160 CAVIN2O95810 425 aa14.1□□□□□ -0.15
TCOF1-205ENST00000439160 ENOX2Q16206 610 aaKnown RBP14.1□□□□□ -0.15
TCOF1-205ENST00000439160 KANK3Q6NY19 840 aa14.1□□□□□ -0.15
TCOF1-205ENST00000439160 C16orf45Q96MC5 204 aaPredicted RBP14.1□□□□□ -0.15
TCOF1-205ENST00000439160 GGA1Q9UJY5 639 aa14.1□□□□□ -0.15
TCOF1-205ENST00000439160 RTL9Q8NET4 1388 aa14.1□□□□□ -0.15
TCOF1-205ENST00000439160 PPRC1Q5VV67 1664 aaKnown RBP14.1□□□□□ -0.15
TCOF1-205ENST00000439160 RBM26Q5T8P6 1007 aaKnown RBP14.1□□□□□ -0.15
TCOF1-205ENST00000439160 MTERF4Q7Z6M4 381 aaKnown RBP14.1□□□□□ -0.15
TCOF1-205ENST00000439160 KIAA1328Q86T90 577 aa14.1□□□□□ -0.15
TCOF1-205ENST00000439160 LMTK2Q8IWU2 1503 aa14.1□□□□□ -0.15
TCOF1-205ENST00000439160 GYG1P46976 350 aa14.1□□□□□ -0.15
TCOF1-205ENST00000439160 UVSSAQ2YD98 709 aa14.1□□□□□ -0.15
TCOF1-205ENST00000439160 PIGBQ92521 554 aa14.1□□□□□ -0.15
TCOF1-205ENST00000439160 STAP2Q9UGK3 403 aa14.1□□□□□ -0.15
TCOF1-205ENST00000439160 FKBP15Q5T1M5 1219 aa14.09□□□□□ -0.15
TCOF1-205ENST00000439160 DHX58Q96C10 678 aa14.09□□□□□ -0.15
TCOF1-205ENST00000439160 EYA3Q99504 573 aa14.09□□□□□ -0.15
TCOF1-205ENST00000439160 HDAC9Q9UKV0 1011 aa14.09□□□□□ -0.15
TCOF1-205ENST00000439160 BCAMP50895 628 aa14.09□□□□□ -0.15
TCOF1-205ENST00000439160 TYRO3Q06418 890 aa14.09□□□□□ -0.15
TCOF1-205ENST00000439160 TEX35Q5T0J7 233 aa14.09□□□□□ -0.15
TCOF1-205ENST00000439160 TMEM87BQ96K49 555 aa14.09□□□□□ -0.15
TCOF1-205ENST00000439160 E7EWF7 191 aa14.09□□□□□ -0.15
TCOF1-205ENST00000439160 BMP15O95972 392 aa14.09□□□□□ -0.15
TCOF1-205ENST00000439160 A0A1B0GVL5 298 aa14.08□□□□□ -0.15
TCOF1-205ENST00000439160 ADORA1P30542 326 aa14.08□□□□□ -0.15
TCOF1-205ENST00000439160 ME3Q16798 604 aa14.08□□□□□ -0.15
TCOF1-205ENST00000439160 TSG101Q99816 390 aa14.08□□□□□ -0.15
TCOF1-205ENST00000439160 HAUS7Q99871 368 aa14.08□□□□□ -0.15
TCOF1-205ENST00000439160 DIP2CQ9Y2E4 1556 aa14.08□□□□□ -0.16
TCOF1-205ENST00000439160 ADGRL3Q9HAR2 1447 aa14.08□□□□□ -0.16
TCOF1-205ENST00000439160 CLCN1P35523 988 aa14.08□□□□□ -0.16
TCOF1-205ENST00000439160 MTIF2P46199 727 aaKnown RBP14.08□□□□□ -0.16
TCOF1-205ENST00000439160 AMPD3Q01432 767 aa14.08□□□□□ -0.16
TCOF1-205ENST00000439160 USPL1Q5W0Q7 1092 aa14.08□□□□□ -0.16
TCOF1-205ENST00000439160 BRAPQ7Z569 592 aa14.08□□□□□ -0.16
TCOF1-205ENST00000439160 NUP88Q99567 741 aaPredicted RBP14.08□□□□□ -0.16
TCOF1-205ENST00000439160 ACBD3Q9H3P7 528 aa14.08□□□□□ -0.16
TCOF1-205ENST00000439160 PNPLA6Q8IY17 1366 aa14.08□□□□□ -0.16
TCOF1-205ENST00000439160 MATR3P43243 847 aaKnown RBP eCLIP14.08□□□□□ -0.16
TCOF1-205ENST00000439160 CCDC181Q5TID7 509 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms