RNA–Protein interactions for RNA: ENST00000439008.1

LINC00399-201, long intergenic non-protein coding RNA 399, humanhuman

TSL 2 BASIC

Gene LINC00399, Length 414 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00399-201ENST00000439008 IL15P40933 162 aaPredicted RBP16.52■□□□□ 0.24
LINC00399-201ENST00000439008 TFCP2Q12800 502 aa16.52■□□□□ 0.24
LINC00399-201ENST00000439008 MVPQ14764 893 aaKnown RBP16.52■□□□□ 0.24
LINC00399-201ENST00000439008 SSH3Q8TE77 659 aa16.52■□□□□ 0.24
LINC00399-201ENST00000439008 MYOZ2Q9NPC6 264 aa16.52■□□□□ 0.24
LINC00399-201ENST00000439008 CEP126Q9P2H0 1117 aa16.52■□□□□ 0.24
LINC00399-201ENST00000439008 ARAP2Q8WZ64 1704 aa16.52■□□□□ 0.24
LINC00399-201ENST00000439008 COL1A1P02452 1464 aaPredicted RBP16.52■□□□□ 0.23
LINC00399-201ENST00000439008 SCARF1Q14162 830 aa16.51■□□□□ 0.23
LINC00399-201ENST00000439008 NBPF9Q3BBW0 867 aa16.51■□□□□ 0.23
LINC00399-201ENST00000439008 CST9Q5W186 159 aa16.51■□□□□ 0.23
LINC00399-201ENST00000439008 CEP85Q6P2H3 762 aa16.51■□□□□ 0.23
LINC00399-201ENST00000439008 ZC3H15Q8WU90 426 aaKnown RBP16.51■□□□□ 0.23
LINC00399-201ENST00000439008 LPIN2Q92539 896 aa16.51■□□□□ 0.23
LINC00399-201ENST00000439008 ZBED3Q96IU2 234 aaPredicted RBP16.51■□□□□ 0.23
LINC00399-201ENST00000439008 SCAF8Q9UPN6 1271 aaKnown RBP16.51■□□□□ 0.23
LINC00399-201ENST00000439008 TIMM10P62072 90 aa16.5■□□□□ 0.23
LINC00399-201ENST00000439008 ATP2B3Q16720 1220 aa16.5■□□□□ 0.23
LINC00399-201ENST00000439008 USP48Q86UV5 1035 aa16.5■□□□□ 0.23
LINC00399-201ENST00000439008 ZBTB40Q9NUA8 1239 aa16.5■□□□□ 0.23
LINC00399-201ENST00000439008 MYH13Q9UKX3 1938 aa16.5■□□□□ 0.23
LINC00399-201ENST00000439008 MYO3BQ8WXR4 1341 aa16.49■□□□□ 0.23
LINC00399-201ENST00000439008 ADM5C9JUS6 153 aa16.49■□□□□ 0.23
LINC00399-201ENST00000439008 F8W031 263 aaPredicted RBP16.49■□□□□ 0.23
LINC00399-201ENST00000439008 IFIT1P09914 478 aaKnown RBP16.49■□□□□ 0.23
LINC00399-201ENST00000439008 PHKA1P46020 1223 aa16.49■□□□□ 0.23
LINC00399-201ENST00000439008 SIRT2Q8IXJ6 389 aa16.49■□□□□ 0.23
LINC00399-201ENST00000439008 GGA3Q9NZ52 723 aa16.49■□□□□ 0.23
LINC00399-201ENST00000439008 WNT10BO00744 389 aa16.48■□□□□ 0.23
LINC00399-201ENST00000439008 SLC5A1P13866 664 aa16.48■□□□□ 0.23
LINC00399-201ENST00000439008 FKBP1AP62942 108 aaKnown RBP16.48■□□□□ 0.23
LINC00399-201ENST00000439008 CREBZFQ9NS37 354 aa16.48■□□□□ 0.23
LINC00399-201ENST00000439008 MS4A1P11836 297 aa16.47■□□□□ 0.23
LINC00399-201ENST00000439008 CHAF1AQ13111 956 aaPredicted RBP16.47■□□□□ 0.23
LINC00399-201ENST00000439008 PDE3AQ14432 1141 aa16.47■□□□□ 0.23
LINC00399-201ENST00000439008 CAVIN4Q5BKX8 364 aa16.47■□□□□ 0.23
LINC00399-201ENST00000439008 MFSD14BQ5SR56 506 aa16.47■□□□□ 0.23
LINC00399-201ENST00000439008 ANGEL2Q5VTE6 544 aaKnown RBP16.47■□□□□ 0.23
LINC00399-201ENST00000439008 KRT26Q7Z3Y9 468 aa16.47■□□□□ 0.23
LINC00399-201ENST00000439008 A0A1B0GUL7 405 aa16.46■□□□□ 0.23
LINC00399-201ENST00000439008 TMEM88BA6NKF7 163 aa16.46■□□□□ 0.23
LINC00399-201ENST00000439008 CDC37L1Q7L3B6 337 aa16.46■□□□□ 0.23
LINC00399-201ENST00000439008 VPS37DQ86XT2 251 aa16.46■□□□□ 0.23
LINC00399-201ENST00000439008 KLRG1Q96E93 195 aa16.46■□□□□ 0.23
LINC00399-201ENST00000439008 NOP58Q9Y2X3 529 aaKnown RBP16.46■□□□□ 0.23
LINC00399-201ENST00000439008 ECM29Q5VYK3 1845 aa16.45■□□□□ 0.22
LINC00399-201ENST00000439008 SURF6O75683 361 aaKnown RBP16.45■□□□□ 0.22
LINC00399-201ENST00000439008 OGFOD1Q8N543 542 aa16.45■□□□□ 0.22
LINC00399-201ENST00000439008 XAGE2Q96GT9 111 aa16.45■□□□□ 0.22
LINC00399-201ENST00000439008 DDX19BQ9UMR2 479 aa16.45■□□□□ 0.22
LINC00399-201ENST00000439008 CELF2O95319 508 aaKnown RBP16.44■□□□□ 0.22
LINC00399-201ENST00000439008 G3BP1Q13283 466 aaKnown RBP eCLIP16.44■□□□□ 0.22
LINC00399-201ENST00000439008 PRAMEF18Q5VWM3 479 aa16.44■□□□□ 0.22
LINC00399-201ENST00000439008 CCDC102BQ68D86 513 aa16.44■□□□□ 0.22
LINC00399-201ENST00000439008 MTMR14Q8NCE2 650 aa16.44■□□□□ 0.22
LINC00399-201ENST00000439008 DCPSQ96C86 337 aaKnown RBP16.44■□□□□ 0.22
LINC00399-201ENST00000439008 PRMT6Q96LA8 375 aaPredicted RBP16.44■□□□□ 0.22
LINC00399-201ENST00000439008 MKRN1Q9UHC7 482 aaKnown RBP16.44■□□□□ 0.22
LINC00399-201ENST00000439008 CFAP100Q494V2 611 aa16.43■□□□□ 0.22
LINC00399-201ENST00000439008 TTF2Q9UNY4 1162 aaKnown RBP16.43■□□□□ 0.22
LINC00399-201ENST00000439008 EXOC6BQ9Y2D4 811 aa16.43■□□□□ 0.22
LINC00399-201ENST00000439008 CNTNAP1P78357 1384 aa16.42■□□□□ 0.22
LINC00399-201ENST00000439008 SPDYE2BA6NHP3 402 aa16.42■□□□□ 0.22
LINC00399-201ENST00000439008 FRAT2O75474 233 aaPredicted RBP16.42■□□□□ 0.22
LINC00399-201ENST00000439008 SPDYE6P0CI01 402 aa16.42■□□□□ 0.22
LINC00399-201ENST00000439008 RRP1P56182 461 aaKnown RBP16.42■□□□□ 0.22
LINC00399-201ENST00000439008 RASGRF1Q13972 1273 aa16.42■□□□□ 0.22
LINC00399-201ENST00000439008 PI16Q6UXB8 463 aa16.42■□□□□ 0.22
LINC00399-201ENST00000439008 NEUROD6Q96NK8 337 aa16.42■□□□□ 0.22
LINC00399-201ENST00000439008 ZNF408Q9H9D4 720 aa16.42■□□□□ 0.22
LINC00399-201ENST00000439008 HDAC9Q9UKV0 1011 aa16.42■□□□□ 0.22
LINC00399-201ENST00000439008 PITPNM2Q9BZ72 1349 aa16.42■□□□□ 0.22
LINC00399-201ENST00000439008 AKAP11Q9UKA4 1901 aa16.41■□□□□ 0.22
LINC00399-201ENST00000439008 RASSF10A6NK89 507 aa16.41■□□□□ 0.22
LINC00399-201ENST00000439008 PRDX5P30044 214 aa16.41■□□□□ 0.22
LINC00399-201ENST00000439008 DLGAP5Q15398 846 aa16.41■□□□□ 0.22
LINC00399-201ENST00000439008 TNNI3KQ59H18 835 aa16.41■□□□□ 0.22
LINC00399-201ENST00000439008 SULF1Q8IWU6 871 aa16.41■□□□□ 0.22
LINC00399-201ENST00000439008 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.41■□□□□ 0.22
LINC00399-201ENST00000439008 CDCA5Q96FF9 252 aa16.41■□□□□ 0.22
LINC00399-201ENST00000439008 TLR7Q9NYK1 1049 aaKnown RBP16.41■□□□□ 0.22
LINC00399-201ENST00000439008 AKAP2Q9Y2D5 859 aa16.41■□□□□ 0.22
LINC00399-201ENST00000439008 FPGT-TNNI3KV9GXZ4 949 aa16.41■□□□□ 0.22
LINC00399-201ENST00000439008 CLRN2A0PK11 232 aa16.4■□□□□ 0.22
LINC00399-201ENST00000439008 CRKP46108 304 aa16.4■□□□□ 0.22
LINC00399-201ENST00000439008 VEGFBP49765 207 aa16.4■□□□□ 0.22
LINC00399-201ENST00000439008 MMP14P50281 582 aa16.4■□□□□ 0.22
LINC00399-201ENST00000439008 SAPCD2Q86UD0 394 aa16.4■□□□□ 0.22
LINC00399-201ENST00000439008 JMYQ8N9B5 988 aa16.4■□□□□ 0.22
LINC00399-201ENST00000439008 EAF2Q96CJ1 260 aaPredicted RBP16.4■□□□□ 0.22
LINC00399-201ENST00000439008 DBNDD2Q9BQY9 259 aa16.4■□□□□ 0.22
LINC00399-201ENST00000439008 TLL2Q9Y6L7 1015 aa16.4■□□□□ 0.22
LINC00399-201ENST00000439008 ZBTB22O15209 634 aa16.39■□□□□ 0.21
LINC00399-201ENST00000439008 OS9Q13438 667 aaPredicted RBP16.39■□□□□ 0.21
LINC00399-201ENST00000439008 RPAP2Q8IXW5 612 aaPredicted RBP16.39■□□□□ 0.21
LINC00399-201ENST00000439008 TBC1D22AQ8WUA7 517 aa16.39■□□□□ 0.21
LINC00399-201ENST00000439008 TDRD3Q9H7E2 651 aaKnown RBP16.39■□□□□ 0.21
LINC00399-201ENST00000439008 GPR108Q9NPR9 543 aa16.39■□□□□ 0.21
LINC00399-201ENST00000439008 SERPINA10Q9UK55 444 aa16.39■□□□□ 0.21
LINC00399-201ENST00000439008 ABT1Q9ULW3 272 aaKnown RBP16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms