RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 SLF2Q8IX21 1173 aa13.45□□□□□ -0.26
TRAPPC9-202ENST00000438773 IGSF3O75054 1194 aa13.45□□□□□ -0.26
TRAPPC9-202ENST00000438773 RPS6KB1P23443 525 aa13.45□□□□□ -0.26
TRAPPC9-202ENST00000438773 SOGA3Q5TF21 947 aa13.45□□□□□ -0.26
TRAPPC9-202ENST00000438773 KRT23Q9C075 422 aa13.45□□□□□ -0.26
TRAPPC9-202ENST00000438773 CEMIPQ8WUJ3 1361 aa13.45□□□□□ -0.26
TRAPPC9-202ENST00000438773 MAGEB6P1A0A0J9YX57 407 aa13.45□□□□□ -0.26
TRAPPC9-202ENST00000438773 EPB41L2O43491 1005 aaKnown RBP13.45□□□□□ -0.26
TRAPPC9-202ENST00000438773 F13A1P00488 732 aa13.45□□□□□ -0.26
TRAPPC9-202ENST00000438773 PDE4BQ07343 736 aa13.45□□□□□ -0.26
TRAPPC9-202ENST00000438773 MTX1Q13505 466 aa13.45□□□□□ -0.26
TRAPPC9-202ENST00000438773 NLRP10Q86W26 655 aa13.45□□□□□ -0.26
TRAPPC9-202ENST00000438773 HAUS7Q99871 368 aa13.45□□□□□ -0.26
TRAPPC9-202ENST00000438773 ANKRD2Q9GZV1 360 aa13.45□□□□□ -0.26
TRAPPC9-202ENST00000438773 UBE2HP62256 183 aa13.44□□□□□ -0.26
TRAPPC9-202ENST00000438773 DNM1Q05193 864 aaKnown RBP13.44□□□□□ -0.26
TRAPPC9-202ENST00000438773 SLC26A6Q9BXS9 759 aa13.44□□□□□ -0.26
TRAPPC9-202ENST00000438773 CNNM2Q9H8M5 875 aa13.44□□□□□ -0.26
TRAPPC9-202ENST00000438773 MROH5Q6ZUA9 1318 aa13.44□□□□□ -0.26
TRAPPC9-202ENST00000438773 ESR2Q92731 530 aa13.44□□□□□ -0.26
TRAPPC9-202ENST00000438773 TXLNAP40222 546 aa13.44□□□□□ -0.26
TRAPPC9-202ENST00000438773 ANKRD20A12PQ8NF67 263 aa13.44□□□□□ -0.26
TRAPPC9-202ENST00000438773 NBPF26B4DH59 902 aa13.44□□□□□ -0.26
TRAPPC9-202ENST00000438773 H7C1W4 665 aa13.44□□□□□ -0.26
TRAPPC9-202ENST00000438773 NBPF10Q6P3W6 841 aaKnown RBP13.44□□□□□ -0.26
TRAPPC9-202ENST00000438773 USP48Q86UV5 1035 aa13.44□□□□□ -0.26
TRAPPC9-202ENST00000438773 NBPF15Q8N660 670 aa13.44□□□□□ -0.26
TRAPPC9-202ENST00000438773 PDLIM2Q96JY6 352 aa13.44□□□□□ -0.26
TRAPPC9-202ENST00000438773 KNDC1Q76NI1 1749 aa13.43□□□□□ -0.26
TRAPPC9-202ENST00000438773 CKAP2LQ8IYA6 745 aa13.43□□□□□ -0.26
TRAPPC9-202ENST00000438773 CRACR2BQ8N4Y2 399 aaPredicted RBP13.43□□□□□ -0.26
TRAPPC9-202ENST00000438773 FBXO3Q9UK99 471 aa13.43□□□□□ -0.26
TRAPPC9-202ENST00000438773 MPHOSPH10O00566 681 aaKnown RBP13.43□□□□□ -0.26
TRAPPC9-202ENST00000438773 GNAT2P19087 354 aa13.43□□□□□ -0.26
TRAPPC9-202ENST00000438773 ZSCAN16Q9H4T2 348 aaPredicted RBP13.43□□□□□ -0.26
TRAPPC9-202ENST00000438773 SOS2Q07890 1332 aaPredicted RBP13.43□□□□□ -0.26
TRAPPC9-202ENST00000438773 SSH2Q76I76 1423 aa13.43□□□□□ -0.26
TRAPPC9-202ENST00000438773 TPM1P09493 284 aa13.43□□□□□ -0.26
TRAPPC9-202ENST00000438773 ADORA1P30542 326 aa13.43□□□□□ -0.26
TRAPPC9-202ENST00000438773 LRSAM1Q6UWE0 723 aa13.43□□□□□ -0.26
TRAPPC9-202ENST00000438773 PI4K2BQ8TCG2 481 aa13.43□□□□□ -0.26
TRAPPC9-202ENST00000438773 TMOD2Q9NZR1 351 aa13.43□□□□□ -0.26
TRAPPC9-202ENST00000438773 USP25Q9UHP3 1055 aa13.43□□□□□ -0.26
TRAPPC9-202ENST00000438773 ZKSCAN5Q9Y2L8 839 aa13.43□□□□□ -0.26
TRAPPC9-202ENST00000438773 THRAP3Q9Y2W1 955 aaKnown RBP13.43□□□□□ -0.26
TRAPPC9-202ENST00000438773 F8W031 263 aaPredicted RBP13.42□□□□□ -0.26
TRAPPC9-202ENST00000438773 RPS8P62241 208 aaKnown RBP13.42□□□□□ -0.26
TRAPPC9-202ENST00000438773 HLFQ16534 295 aa13.42□□□□□ -0.26
TRAPPC9-202ENST00000438773 RASEFQ8IZ41 740 aa13.42□□□□□ -0.26
TRAPPC9-202ENST00000438773 ZBTB9Q96C00 473 aa13.42□□□□□ -0.26
TRAPPC9-202ENST00000438773 ZC3H12CQ9C0D7 883 aaKnown RBP13.42□□□□□ -0.26
TRAPPC9-202ENST00000438773 STX8Q9UNK0 236 aa13.42□□□□□ -0.26
TRAPPC9-202ENST00000438773 SPDYE4A6NLX3 237 aa13.42□□□□□ -0.26
TRAPPC9-202ENST00000438773 ZNF804AQ7Z570 1209 aa13.42□□□□□ -0.26
TRAPPC9-202ENST00000438773 TSC1Q92574 1164 aa13.42□□□□□ -0.26
TRAPPC9-202ENST00000438773 TRERF1Q96PN7 1200 aa13.42□□□□□ -0.26
TRAPPC9-202ENST00000438773 TM6SF1Q9BZW5 370 aa13.42□□□□□ -0.26
TRAPPC9-202ENST00000438773 KIF20BQ96Q89 1820 aa13.42□□□□□ -0.26
TRAPPC9-202ENST00000438773 PDE8BO95263 885 aa13.42□□□□□ -0.26
TRAPPC9-202ENST00000438773 HIBADHP31937 336 aaKnown RBP13.42□□□□□ -0.26
TRAPPC9-202ENST00000438773 USPL1Q5W0Q7 1092 aa13.42□□□□□ -0.26
TRAPPC9-202ENST00000438773 SPATA5Q8NB90 893 aa13.42□□□□□ -0.26
TRAPPC9-202ENST00000438773 ARMT1Q9H993 441 aa13.42□□□□□ -0.26
TRAPPC9-202ENST00000438773 DENND2AQ9ULE3 1009 aa13.42□□□□□ -0.26
TRAPPC9-202ENST00000438773 CCDC102BQ68D86 513 aa13.42□□□□□ -0.26
TRAPPC9-202ENST00000438773 TMTC2Q8N394 836 aa13.42□□□□□ -0.26
TRAPPC9-202ENST00000438773 ATP10DQ9P241 1426 aa13.41□□□□□ -0.26
TRAPPC9-202ENST00000438773 AFF2P51816 1311 aa13.41□□□□□ -0.26
TRAPPC9-202ENST00000438773 UBR1Q8IWV7 1749 aa13.41□□□□□ -0.26
TRAPPC9-202ENST00000438773 PTPDC1A2A3K4 754 aa13.41□□□□□ -0.26
TRAPPC9-202ENST00000438773 GSTO1P78417 241 aa13.41□□□□□ -0.26
TRAPPC9-202ENST00000438773 TSR1Q2NL82 804 aaKnown RBP13.41□□□□□ -0.26
TRAPPC9-202ENST00000438773 KRT27Q7Z3Y8 459 aa13.41□□□□□ -0.26
TRAPPC9-202ENST00000438773 ALG1Q9BT22 464 aa13.41□□□□□ -0.26
TRAPPC9-202ENST00000438773 LSG1Q9H089 658 aaKnown RBP13.41□□□□□ -0.26
TRAPPC9-202ENST00000438773 ZNF532Q9HCE3 1301 aa13.41□□□□□ -0.26
TRAPPC9-202ENST00000438773 B4E1Z4 1266 aa13.41□□□□□ -0.26
TRAPPC9-202ENST00000438773 RXRAP19793 462 aa13.41□□□□□ -0.26
TRAPPC9-202ENST00000438773 FSIP1Q8NA03 581 aa13.41□□□□□ -0.26
TRAPPC9-202ENST00000438773 CIAO1O76071 339 aa13.41□□□□□ -0.26
TRAPPC9-202ENST00000438773 SMC2O95347 1197 aa13.41□□□□□ -0.26
TRAPPC9-202ENST00000438773 FAM196AQ6ZSG2 479 aa13.41□□□□□ -0.26
TRAPPC9-202ENST00000438773 CEP57L1Q8IYX8 460 aa13.41□□□□□ -0.26
TRAPPC9-202ENST00000438773 GPR108Q9NPR9 543 aa13.41□□□□□ -0.26
TRAPPC9-202ENST00000438773 MST1RQ04912 1400 aa13.4□□□□□ -0.26
TRAPPC9-202ENST00000438773 ERVV-1B6SEH8 477 aa13.4□□□□□ -0.26
TRAPPC9-202ENST00000438773 ZNF500O60304 480 aaPredicted RBP13.4□□□□□ -0.26
TRAPPC9-202ENST00000438773 RTN1Q16799 776 aa13.4□□□□□ -0.26
TRAPPC9-202ENST00000438773 FAM177A1Q8N128 213 aaPredicted RBP13.4□□□□□ -0.26
TRAPPC9-202ENST00000438773 TCEAL9Q9UHQ7 104 aa13.4□□□□□ -0.26
TRAPPC9-202ENST00000438773 JCADQ9P266 1359 aa13.4□□□□□ -0.26
TRAPPC9-202ENST00000438773 GADD45BO75293 160 aaPredicted RBP13.4□□□□□ -0.26
TRAPPC9-202ENST00000438773 LDHBP07195 334 aaKnown RBP13.4□□□□□ -0.26
TRAPPC9-202ENST00000438773 IFIT1BQ5T764 474 aaKnown RBP13.4□□□□□ -0.26
TRAPPC9-202ENST00000438773 FILIP1Q7Z7B0 1213 aa13.4□□□□□ -0.26
TRAPPC9-202ENST00000438773 MCM9Q9NXL9 1143 aa13.4□□□□□ -0.26
TRAPPC9-202ENST00000438773 PHKA1P46020 1223 aa13.4□□□□□ -0.26
TRAPPC9-202ENST00000438773 SYNE4Q8N205 404 aa13.4□□□□□ -0.26
TRAPPC9-202ENST00000438773 C17orf53Q8N3J3 647 aaPredicted RBP13.4□□□□□ -0.26
TRAPPC9-202ENST00000438773 PODXL2Q9NZ53 605 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms